RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 MAS1LP35410 378 aa3.9□□□□□ -1.79
FXN-205ENST00000498653 BLCAPP62952 87 aa3.9□□□□□ -1.79
FXN-205ENST00000498653 NHLH2Q02577 135 aa3.9□□□□□ -1.79
FXN-205ENST00000498653 FOXE3Q13461 319 aa3.9□□□□□ -1.79
FXN-205ENST00000498653 SMCO1Q147U7 214 aa3.9□□□□□ -1.79
FXN-205ENST00000498653 TNXAQ16473 311 aa3.9□□□□□ -1.79
FXN-205ENST00000498653 PRSS8Q16651 343 aa3.9□□□□□ -1.79
FXN-205ENST00000498653 C9orf152Q5JTZ5 239 aa3.9□□□□□ -1.79
FXN-205ENST00000498653 GSG1LQ6UXU4 331 aa3.9□□□□□ -1.79
FXN-205ENST00000498653 PPP1R27Q86WC6 154 aa3.9□□□□□ -1.79
FXN-205ENST00000498653 MMD2Q8IY49 270 aa3.9□□□□□ -1.79
FXN-205ENST00000498653 C5orf56Q8N8D9 126 aa3.9□□□□□ -1.79
FXN-205ENST00000498653 Q8N9W7 124 aa3.9□□□□□ -1.79
FXN-205ENST00000498653 KLHL30-AS1Q8NEE0 82 aa3.9□□□□□ -1.79
FXN-205ENST00000498653 OR1S1Q8NH92 325 aa3.9□□□□□ -1.79
FXN-205ENST00000498653 PHLDA1Q8WV24 401 aaPredicted RBP3.9□□□□□ -1.79
FXN-205ENST00000498653 PDCD10Q9BUL8 212 aa3.9□□□□□ -1.79
FXN-205ENST00000498653 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.9□□□□□ -1.79
FXN-205ENST00000498653 FKBP11Q9NYL4 201 aa3.9□□□□□ -1.79
FXN-205ENST00000498653 MGAT4CQ9UBM8 478 aa3.9□□□□□ -1.79
FXN-205ENST00000498653 CACNG5Q9UF02 275 aa3.9□□□□□ -1.79
FXN-205ENST00000498653 CACFD1Q9UGQ2 172 aa3.9□□□□□ -1.79
FXN-205ENST00000498653 PRNDQ9UKY0 176 aa3.9□□□□□ -1.79
FXN-205ENST00000498653 LPAP08519 4548 aa3.9□□□□□ -1.79
FXN-205ENST00000498653 TRAV3A0A0B4J244 114 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 HMX3A6NHT5 357 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 C15orf61A6NNL5 157 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 CCL24O00175 119 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 FCN1O00602 326 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 CNIH1O95406 144 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 SIX6O95475 246 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 CA2P00918 260 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 IFNA17P01571 189 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 HLA-DRB1P01911 266 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 AMY1AP04745 511 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 FGF2P09038 288 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 SLC25A6P12236 298 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 HLA-GP17693 338 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 RPL27AP46776 148 aaKnown RBP3.89□□□□□ -1.79
FXN-205ENST00000498653 INSL3P51460 131 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 OR2B8PP59922 312 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 HSPE1P61604 102 aaKnown RBP3.89□□□□□ -1.79
FXN-205ENST00000498653 RRAS2P62070 204 aaPredicted RBP3.89□□□□□ -1.79
FXN-205ENST00000498653 GNB1P62873 340 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 RPL8P62917 257 aaKnown RBP3.89□□□□□ -1.79
FXN-205ENST00000498653 PJVKQ0ZLH3 352 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 FXYD3Q14802 87 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 FCN2Q15485 313 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 IZUMO4Q1ZYL8 232 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 IAH1Q2TAA2 248 aaPredicted RBP3.89□□□□□ -1.79
FXN-205ENST00000498653 LGALS9BQ3B8N2 356 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 NMSQ5H8A3 153 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 ZNF562Q6V9R5 426 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 CENPVQ7Z7K6 275 aaPredicted RBP3.89□□□□□ -1.79
FXN-205ENST00000498653 FOXRED2Q8IWF2 684 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 FAM71E2Q8N5Q1 922 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 ZBTB8BQ8NAP8 495 aaPredicted RBP3.89□□□□□ -1.79
FXN-205ENST00000498653 OR1L8Q8NGR8 309 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 ABHD5Q8WTS1 349 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 C2orf50Q96LR7 162 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 QTRT1Q9BXR0 403 aaKnown RBP3.89□□□□□ -1.79
FXN-205ENST00000498653 COMMD5Q9GZQ3 224 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 ZNF430Q9H8G1 570 aaPredicted RBP3.89□□□□□ -1.79
FXN-205ENST00000498653 COA4Q9NYJ1 87 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 GSKIPQ9P0R6 139 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 FOXA2Q9Y261 457 aaPredicted RBP3.89□□□□□ -1.79
FXN-205ENST00000498653 NSG2Q9Y328 171 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 OR51B2Q9Y5P1 312 aa3.89□□□□□ -1.79
FXN-205ENST00000498653 SSPOA2VEC9 5147 aa3.88□□□□□ -1.79
FXN-205ENST00000498653 IGHV7-81A0A0B4J1V7 117 aa3.88□□□□□ -1.79
FXN-205ENST00000498653 TEX50A0A1B0GTY4 177 aa3.88□□□□□ -1.79
FXN-205ENST00000498653 A0A1W2PN81 502 aa3.88□□□□□ -1.79
FXN-205ENST00000498653 SH2D7A6NKC9 451 aaPredicted RBP3.88□□□□□ -1.79
FXN-205ENST00000498653 CEBPZOSA8MTT3 80 aa3.88□□□□□ -1.79
FXN-205ENST00000498653 FAM90A26D6RGX4 464 aa3.88□□□□□ -1.79
FXN-205ENST00000498653 WRBO00258 174 aa3.88□□□□□ -1.79
FXN-205ENST00000498653 ST8SIA3O43173 380 aa3.88□□□□□ -1.79
FXN-205ENST00000498653 PITX3O75364 302 aa3.88□□□□□ -1.79
FXN-205ENST00000498653 MED6O75586 246 aa3.88□□□□□ -1.79
FXN-205ENST00000498653 SCGB1D2O95969 90 aa3.88□□□□□ -1.79
FXN-205ENST00000498653 TRAPPC2P0DI81 140 aa3.88□□□□□ -1.79
FXN-205ENST00000498653 TRAPPC2BP0DI82 140 aa3.88□□□□□ -1.79
FXN-205ENST00000498653 MYOD1P15172 320 aa3.88□□□□□ -1.79
FXN-205ENST00000498653 CHRNA7P36544 502 aa3.88□□□□□ -1.79
FXN-205ENST00000498653 NKX2-1P43699 371 aaPredicted RBP3.88□□□□□ -1.79
FXN-205ENST00000498653 HOXA1P49639 335 aaPredicted RBP3.88□□□□□ -1.79
FXN-205ENST00000498653 SPCS3P61009 180 aa3.88□□□□□ -1.79
FXN-205ENST00000498653 CX3CL1P78423 397 aa3.88□□□□□ -1.79
FXN-205ENST00000498653 CYCSP99999 105 aaKnown RBP3.88□□□□□ -1.79
FXN-205ENST00000498653 DEFB136Q30KP8 78 aa3.88□□□□□ -1.79
FXN-205ENST00000498653 LINC00322Q6ZN03 302 aaPredicted RBP3.88□□□□□ -1.79
FXN-205ENST00000498653 Q6ZR54 194 aa3.88□□□□□ -1.79
FXN-205ENST00000498653 SLC35E3Q7Z769 313 aa3.88□□□□□ -1.79
FXN-205ENST00000498653 ZNF429Q86V71 674 aa3.88□□□□□ -1.79
FXN-205ENST00000498653 OR5B3Q8NH48 314 aa3.88□□□□□ -1.79
FXN-205ENST00000498653 OR52E5Q8NH55 327 aa3.88□□□□□ -1.79
FXN-205ENST00000498653 GRPEL2Q8TAA5 225 aa3.88□□□□□ -1.79
FXN-205ENST00000498653 SRSF12Q8WXF0 261 aaKnown RBP3.88□□□□□ -1.79
FXN-205ENST00000498653 ARPC1AQ92747 370 aa3.88□□□□□ -1.79
FXN-205ENST00000498653 OR10C1Q96KK4 312 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms