RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 AADACL3Q5VUY0 350 aa1.16□□□□□ -2.22
LMNB1-207ENST00000494185 LHFPL1Q86WI0 220 aa1.16□□□□□ -2.22
LMNB1-207ENST00000494185 LRRC28Q86X40 367 aaPredicted RBP1.16□□□□□ -2.22
LMNB1-207ENST00000494185 OR5H6Q8NGV6 325 aa1.16□□□□□ -2.22
LMNB1-207ENST00000494185 H1FXQ92522 213 aaKnown RBP1.16□□□□□ -2.22
LMNB1-207ENST00000494185 SERPINI1Q99574 410 aa1.16□□□□□ -2.22
LMNB1-207ENST00000494185 DERL1Q9BUN8 251 aa1.16□□□□□ -2.22
LMNB1-207ENST00000494185 TTTY13Q9BZ97 58 aa1.16□□□□□ -2.22
LMNB1-207ENST00000494185 SH3BGRL3Q9H299 93 aa1.16□□□□□ -2.22
LMNB1-207ENST00000494185 C11orf68Q9H3H3 251 aaKnown RBP1.16□□□□□ -2.22
LMNB1-207ENST00000494185 BIN3Q9NQY0 253 aa1.16□□□□□ -2.22
LMNB1-207ENST00000494185 MINOS1-NBL1R4GNA1 71 aa1.16□□□□□ -2.22
LMNB1-207ENST00000494185 REREQ9P2R6 1566 aa1.16□□□□□ -2.22
LMNB1-207ENST00000494185 UHRF1BP1Q6BDS2 1440 aa1.15□□□□□ -2.22
LMNB1-207ENST00000494185 TRPM3Q9HCF6 1732 aaPredicted RBP1.15□□□□□ -2.22
LMNB1-207ENST00000494185 ITGB4P16144 1822 aa1.15□□□□□ -2.22
LMNB1-207ENST00000494185 IGKV1D-43A0A0B4J1Z2 117 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 TRAV4A0A0B4J268 109 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 MUC21A0A0G2JKD1 596 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 A0A0J9YX75 114 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 MUC21A0A140T8X8 626 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 A0A1W2PRE2 83 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 C11orf86A6NJI1 115 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 SIGLEC16A6NMB1 481 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 TSTD3H0UI37 97 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 AIPO00170 330 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 CCL25O15444 150 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 CREBL2O60519 120 aaPredicted RBP1.15□□□□□ -2.23
LMNB1-207ENST00000494185 PIAS1O75925 651 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 IGHV3-7P01780 117 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 MSMBP08118 114 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 CTSGP08311 255 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 LGALS1P09382 135 aaKnown RBP1.15□□□□□ -2.23
LMNB1-207ENST00000494185 MPC1LP0DKB6 136 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 NFYAP23511 347 aaPredicted RBP1.15□□□□□ -2.23
LMNB1-207ENST00000494185 SDC4P31431 198 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 AKR1D1P51857 326 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 TCTAP57738 103 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 RNASE10Q5GAN6 216 aaKnown RBP1.15□□□□□ -2.23
LMNB1-207ENST00000494185 SPANXN3Q5MJ09 141 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 AKR1C8PQ5T2L2 129 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 SAMD13Q5VXD3 122 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 LYZL1Q6UWQ5 148 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 ZNF705AQ6ZN79 300 aaPredicted RBP1.15□□□□□ -2.23
LMNB1-207ENST00000494185 ZNF767PQ75MW2 155 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 SNX29P2Q8IUI4 249 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 MSRB3Q8IXL7 192 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 IFT20Q8IY31 132 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 RPP25LQ8N5L8 163 aaKnown RBP1.15□□□□□ -2.23
LMNB1-207ENST00000494185 OR5J2Q8NH18 312 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 OR4C6Q8NH72 309 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 OR13C6PQ8NH95 151 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 GRPEL2Q8TAA5 225 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 SFT2D1Q8WV19 159 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 ZHX1-C8orf76Q96EF9 292 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 PPP3R2Q96LZ3 170 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 C20orf166-AS1Q96NR2 134 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 AIF1LQ9BQI0 150 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 VPS25Q9BRG1 176 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 Q9BRP9 147 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 GINS3Q9BRX5 216 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 OR8D2Q9GZM6 311 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 LYRM2Q9NU23 88 aaPredicted RBP1.15□□□□□ -2.23
LMNB1-207ENST00000494185 PRNDQ9UKY0 176 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 CCL26Q9Y258 94 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 UTP11Q9Y3A2 253 aaKnown RBP1.15□□□□□ -2.23
LMNB1-207ENST00000494185 HSPB11Q9Y547 144 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 RBM7Q9Y580 266 aaKnown RBP1.15□□□□□ -2.23
LMNB1-207ENST00000494185 SHROOM3Q8TF72 1996 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 DSCAMO60469 2012 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 SHANK3Q9BYB0 1731 aa1.15□□□□□ -2.23
LMNB1-207ENST00000494185 HECW2Q9P2P5 1572 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 DENND4BO75064 1496 aaPredicted RBP1.14□□□□□ -2.23
LMNB1-207ENST00000494185 ZNF518AQ6AHZ1 1483 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 MRC2Q9UBG0 1479 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 IGHV3-64A0A075B6Q5 118 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 TRAV7A0A075B6U4 112 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 LOC100130705A0A1B0GUX0 176 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 GGT3PA6NGU5 568 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 C5orf58C9J3I9 102 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 ZNF73O43830 326 aaPredicted RBP1.14□□□□□ -2.23
LMNB1-207ENST00000494185 BANF1O75531 89 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 NDUFC2O95298 119 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 P0C880 135 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 HLA-DMBP28068 263 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 S100GP29377 79 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 FUSP35637 526 aaKnown RBP eCLIP1.14□□□□□ -2.23
LMNB1-207ENST00000494185 GLRXP35754 106 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 ZNF80P51504 273 aaPredicted RBP1.14□□□□□ -2.23
LMNB1-207ENST00000494185 FXYD2P54710 66 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 TPI1P60174 286 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 RHOBP62745 196 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 RPS28P62857 69 aaKnown RBP1.14□□□□□ -2.23
LMNB1-207ENST00000494185 PLCXD2Q0VAA5 305 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 FOXF1Q12946 379 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 TSNQ15631 228 aaKnown RBP1.14□□□□□ -2.23
LMNB1-207ENST00000494185 OCIAD2Q56VL3 154 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 NCMAPQ5T1S8 102 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 HCP5Q6MZN7 132 aa1.14□□□□□ -2.23
LMNB1-207ENST00000494185 Q6ZS52 159 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms