RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 CA7P43166 264 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 UQCRFS1P47985 274 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 RBPJQ06330 500 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 CT83Q5H943 113 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 IBA57Q5T440 356 aaKnown RBP9.37□□□□□ -0.91
RFC4-214ENST00000494047 ZNF474Q6S9Z5 364 aaPredicted RBP9.37□□□□□ -0.91
RFC4-214ENST00000494047 TEX43Q6ZNM6 134 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 C19orf35Q6ZS72 473 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 VKORC1L1Q8N0U8 176 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 SIGLECL1Q8N7X8 197 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 THAP8Q8NA92 274 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 ZNF114Q8NC26 417 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 SRSF8Q9BRL6 282 aaKnown RBP9.37□□□□□ -0.91
RFC4-214ENST00000494047 SAMD10Q9BYL1 202 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 DNAJC4Q9NNZ3 241 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 KAAG1Q9UBP8 84 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 RNF24Q9Y225 148 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 WASHC3Q9Y3C0 194 aa9.37□□□□□ -0.91
RFC4-214ENST00000494047 AMMECR1Q9Y4X0 333 aaPredicted RBP9.37□□□□□ -0.91
RFC4-214ENST00000494047 SPTAN1Q13813 2472 aaKnown RBP9.36□□□□□ -0.91
RFC4-214ENST00000494047 USP9XQ93008 2570 aaPredicted RBP9.36□□□□□ -0.91
RFC4-214ENST00000494047 RELNP78509 3460 aa9.36□□□□□ -0.91
RFC4-214ENST00000494047 ASH1LQ9NR48 2969 aaKnown RBP9.36□□□□□ -0.91
RFC4-214ENST00000494047 SMIM27A0A1W2PRY6 76 aa9.36□□□□□ -0.91
RFC4-214ENST00000494047 C20orf202A1L168 122 aa9.36□□□□□ -0.91
RFC4-214ENST00000494047 C17orf100A8MU93 164 aa9.36□□□□□ -0.91
RFC4-214ENST00000494047 PRRG2O14669 202 aa9.36□□□□□ -0.91
RFC4-214ENST00000494047 COX7A2P2O60397 106 aa9.36□□□□□ -0.91
RFC4-214ENST00000494047 RD3LP0DJH9 198 aa9.36□□□□□ -0.91
RFC4-214ENST00000494047 UBE2L3P68036 154 aaKnown RBP9.36□□□□□ -0.91
RFC4-214ENST00000494047 SEM1Q6ZVN7 128 aa9.36□□□□□ -0.91
RFC4-214ENST00000494047 PERPQ96FX8 193 aa9.36□□□□□ -0.91
RFC4-214ENST00000494047 KCNS1Q96KK3 526 aa9.36□□□□□ -0.91
RFC4-214ENST00000494047 HINT2Q9BX68 163 aa9.36□□□□□ -0.91
RFC4-214ENST00000494047 ZNF331Q9NQX6 463 aaPredicted RBP9.36□□□□□ -0.91
RFC4-214ENST00000494047 FAM215AQ9Y5M1 114 aa9.36□□□□□ -0.91
RFC4-214ENST00000494047 TET2Q6N021 2002 aaPredicted RBP9.35□□□□□ -0.91
RFC4-214ENST00000494047 PPIAL4EA0A075B759 164 aa9.35□□□□□ -0.91
RFC4-214ENST00000494047 TCRBV4S1A1TA0A5B7 111 aa9.35□□□□□ -0.91
RFC4-214ENST00000494047 IZUMO1RA6ND01 250 aa9.35□□□□□ -0.91
RFC4-214ENST00000494047 PPIAL4DF5H284 164 aa9.35□□□□□ -0.91
RFC4-214ENST00000494047 H0YJW9 148 aa9.35□□□□□ -0.91
RFC4-214ENST00000494047 C16orf97H3BN30 126 aa9.35□□□□□ -0.91
RFC4-214ENST00000494047 NDUFB3O43676 98 aa9.35□□□□□ -0.91
RFC4-214ENST00000494047 RBP4P02753 201 aa9.35□□□□□ -0.91
RFC4-214ENST00000494047 PPIAL4FP0DN26 164 aa9.35□□□□□ -0.91
RFC4-214ENST00000494047 NDUFB7P17568 137 aa9.35□□□□□ -0.91
RFC4-214ENST00000494047 TDGF1P3P51864 188 aa9.35□□□□□ -0.91
RFC4-214ENST00000494047 RPS16P62249 146 aaKnown RBP9.35□□□□□ -0.91
RFC4-214ENST00000494047 C10orf113Q5VZT2 155 aa9.35□□□□□ -0.91
RFC4-214ENST00000494047 CDPF1Q6NVV7 123 aa9.35□□□□□ -0.91
RFC4-214ENST00000494047 MIR17HGQ75NE6 70 aa9.35□□□□□ -0.91
RFC4-214ENST00000494047 LRP11Q86VZ4 500 aa9.35□□□□□ -0.91
RFC4-214ENST00000494047 KLHDC1Q8N7A1 406 aa9.35□□□□□ -0.91
RFC4-214ENST00000494047 OR9G1Q8NH87 305 aa9.35□□□□□ -0.91
RFC4-214ENST00000494047 C1orf159Q96HA4 380 aa9.35□□□□□ -0.91
RFC4-214ENST00000494047 VAMP8Q9BV40 100 aa9.35□□□□□ -0.91
RFC4-214ENST00000494047 PRO1933Q9H354 126 aa9.35□□□□□ -0.91
RFC4-214ENST00000494047 NAT8BQ9UHF3 227 aa9.35□□□□□ -0.91
RFC4-214ENST00000494047 PPIAL4AQ9Y536 164 aa9.35□□□□□ -0.91
RFC4-214ENST00000494047 ICE1Q9Y2F5 2266 aa9.34□□□□□ -0.91
RFC4-214ENST00000494047 USP9YO00507 2555 aaPredicted RBP9.34□□□□□ -0.91
RFC4-214ENST00000494047 FAM231BA6NCW3 169 aa9.34□□□□□ -0.91
RFC4-214ENST00000494047 C22orf46C9J442 243 aa9.34□□□□□ -0.91
RFC4-214ENST00000494047 K7EN84 100 aa9.34□□□□□ -0.91
RFC4-214ENST00000494047 FOSL1P15407 271 aa9.34□□□□□ -0.91
RFC4-214ENST00000494047 CASP6P55212 293 aa9.34□□□□□ -0.91
RFC4-214ENST00000494047 SRSF1Q07955 248 aaKnown RBP eCLIP9.34□□□□□ -0.91
RFC4-214ENST00000494047 FAM53AQ6NSI3 398 aaPredicted RBP9.34□□□□□ -0.91
RFC4-214ENST00000494047 GFRALQ6UXV0 394 aa9.34□□□□□ -0.91
RFC4-214ENST00000494047 TCF23Q7RTU1 214 aa9.34□□□□□ -0.91
RFC4-214ENST00000494047 TEX45Q8NA69 505 aa9.34□□□□□ -0.91
RFC4-214ENST00000494047 GRAMD2BQ96HH9 432 aa9.34□□□□□ -0.91
RFC4-214ENST00000494047 IGF2BP2-AS1Q96M15 143 aa9.34□□□□□ -0.91
RFC4-214ENST00000494047 RNF5Q99942 180 aa9.34□□□□□ -0.91
RFC4-214ENST00000494047 SAP30LQ9HAJ7 183 aa9.34□□□□□ -0.91
RFC4-214ENST00000494047 SETXQ7Z333 2677 aaKnown RBP9.33□□□□□ -0.92
RFC4-214ENST00000494047 DOPEY1Q5JWR5 2465 aa9.33□□□□□ -0.92
RFC4-214ENST00000494047 ZNF705FA8MVS1 300 aaPredicted RBP9.33□□□□□ -0.92
RFC4-214ENST00000494047 ZNF705DP0CH99 300 aaPredicted RBP9.33□□□□□ -0.92
RFC4-214ENST00000494047 ZNF705BP0CI00 300 aaPredicted RBP9.33□□□□□ -0.92
RFC4-214ENST00000494047 BMP5P22003 454 aa9.33□□□□□ -0.92
RFC4-214ENST00000494047 CRYBB3P26998 211 aa9.33□□□□□ -0.92
RFC4-214ENST00000494047 IER3P46695 156 aa9.33□□□□□ -0.92
RFC4-214ENST00000494047 GNG10P50151 68 aa9.33□□□□□ -0.92
RFC4-214ENST00000494047 LINC00205P59089 165 aa9.33□□□□□ -0.92
RFC4-214ENST00000494047 NUTF2P61970 127 aaKnown RBP9.33□□□□□ -0.92
RFC4-214ENST00000494047 PMCHL1Q16048 86 aa9.33□□□□□ -0.92
RFC4-214ENST00000494047 PVRIGQ6DKI7 326 aa9.33□□□□□ -0.92
RFC4-214ENST00000494047 VHLLQ6RSH7 139 aa9.33□□□□□ -0.92
RFC4-214ENST00000494047 TGIF2LXQ8IUE1 241 aa9.33□□□□□ -0.92
RFC4-214ENST00000494047 PSMG3-AS1Q96PY0 264 aa9.33□□□□□ -0.92
RFC4-214ENST00000494047 TRGV9Q99603 122 aa9.33□□□□□ -0.92
RFC4-214ENST00000494047 CCL13Q99616 98 aa9.33□□□□□ -0.92
RFC4-214ENST00000494047 MIEN1Q9BRT3 115 aa9.33□□□□□ -0.92
RFC4-214ENST00000494047 PAXXQ9BUH6 204 aa9.33□□□□□ -0.92
RFC4-214ENST00000494047 GFRA4Q9GZZ7 299 aa9.33□□□□□ -0.92
RFC4-214ENST00000494047 PSMB11A5LHX3 300 aa9.32□□□□□ -0.92
RFC4-214ENST00000494047 ZNF253O75346 499 aa9.32□□□□□ -0.92
RFC4-214ENST00000494047 ACTL6BO94805 426 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms