RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 C18orf15Q96N68 181 aa9.37□□□□□ -0.91
CRNKL1-204ENST00000490910 TMUB1Q9BVT8 246 aa9.37□□□□□ -0.91
CRNKL1-204ENST00000490910 CFHR5Q9BXR6 569 aa9.37□□□□□ -0.91
CRNKL1-204ENST00000490910 LINC00470Q9BZP3 86 aa9.37□□□□□ -0.91
CRNKL1-204ENST00000490910 IGHV5-10-1A0A0J9YXX1 117 aa9.36□□□□□ -0.91
CRNKL1-204ENST00000490910 DUTP33316 252 aaKnown RBP9.36□□□□□ -0.91
CRNKL1-204ENST00000490910 NEUROG1Q92886 237 aa9.36□□□□□ -0.91
CRNKL1-204ENST00000490910 C11orf52Q96A22 123 aa9.36□□□□□ -0.91
CRNKL1-204ENST00000490910 PRELID3AQ96N28 172 aa9.36□□□□□ -0.91
CRNKL1-204ENST00000490910 GP6Q9HCN6 339 aa9.36□□□□□ -0.91
CRNKL1-204ENST00000490910 CALYQ9NYX4 217 aa9.36□□□□□ -0.91
CRNKL1-204ENST00000490910 HIGD1AQ9Y241 93 aa9.36□□□□□ -0.91
CRNKL1-204ENST00000490910 CHTOPQ9Y3Y2 248 aaKnown RBP9.36□□□□□ -0.91
CRNKL1-204ENST00000490910 IGHV3OR15-7A0A075B7D8 119 aa9.36□□□□□ -0.91
CRNKL1-204ENST00000490910 TMEM189A5PLL7 270 aa9.36□□□□□ -0.91
CRNKL1-204ENST00000490910 FAM90A9PA6NNJ1 464 aa9.36□□□□□ -0.91
CRNKL1-204ENST00000490910 MAGEA5P43359 124 aa9.36□□□□□ -0.91
CRNKL1-204ENST00000490910 KIR2DL2P43627 348 aaPredicted RBP9.36□□□□□ -0.91
CRNKL1-204ENST00000490910 TMEM249Q2WGJ8 235 aa9.36□□□□□ -0.91
CRNKL1-204ENST00000490910 GOLT1AQ6ZVE7 132 aa9.36□□□□□ -0.91
CRNKL1-204ENST00000490910 DCTN5Q9BTE1 182 aa9.36□□□□□ -0.91
CRNKL1-204ENST00000490910 C15orf61A6NNL5 157 aa9.36□□□□□ -0.91
CRNKL1-204ENST00000490910 ODF3L1Q8IXM7 274 aa9.36□□□□□ -0.91
CRNKL1-204ENST00000490910 AKIRIN1Q9H9L7 192 aaPredicted RBP9.36□□□□□ -0.91
CRNKL1-204ENST00000490910 FER1L5A0AVI2 2057 aa9.35□□□□□ -0.91
CRNKL1-204ENST00000490910 TRBV20OR9-2A0A075B6H5 130 aa9.35□□□□□ -0.91
CRNKL1-204ENST00000490910 IGLV3-12A0A075B6K2 115 aa9.35□□□□□ -0.91
CRNKL1-204ENST00000490910 TRAV8-6A0A0B4J262 113 aa9.35□□□□□ -0.91
CRNKL1-204ENST00000490910 K7EP34 96 aa9.35□□□□□ -0.91
CRNKL1-204ENST00000490910 GFRA3O60609 400 aa9.35□□□□□ -0.91
CRNKL1-204ENST00000490910 ZNF138P52744 262 aa9.35□□□□□ -0.91
CRNKL1-204ENST00000490910 FOXF2Q12947 444 aa9.35□□□□□ -0.91
CRNKL1-204ENST00000490910 EBLN2Q6P2I7 272 aa9.35□□□□□ -0.91
CRNKL1-204ENST00000490910 MAP1LC3AQ9H492 121 aa9.35□□□□□ -0.91
CRNKL1-204ENST00000490910 EPDR1Q9UM22 224 aa9.35□□□□□ -0.91
CRNKL1-204ENST00000490910 TRGV5A0A0B4J1U4 118 aa9.35□□□□□ -0.91
CRNKL1-204ENST00000490910 TAX1BP3O14907 124 aa9.35□□□□□ -0.91
CRNKL1-204ENST00000490910 SSPNQ14714 243 aa9.35□□□□□ -0.91
CRNKL1-204ENST00000490910 TWIST1Q15672 202 aa9.35□□□□□ -0.91
CRNKL1-204ENST00000490910 FAM222BQ8WU58 562 aa9.35□□□□□ -0.91
CRNKL1-204ENST00000490910 ABCA1O95477 2261 aa9.35□□□□□ -0.91
CRNKL1-204ENST00000490910 IGHV3-21A0A0B4J1V1 117 aa9.35□□□□□ -0.91
CRNKL1-204ENST00000490910 ORM1P02763 201 aa9.35□□□□□ -0.91
CRNKL1-204ENST00000490910 OR9G1Q8NH87 305 aa9.35□□□□□ -0.91
CRNKL1-204ENST00000490910 RPEQ96AT9 228 aa9.35□□□□□ -0.91
CRNKL1-204ENST00000490910 K7ESF4 209 aa9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 IL4P05112 153 aa9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 PSMB2P49721 201 aa9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 RBPJQ06330 500 aa9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 PSG3Q16557 428 aa9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 FMC1Q96HJ9 113 aa9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 ZNF479Q96JC4 524 aa9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 MOGAT3Q86VF5 341 aa9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 CACNG8Q8WXS5 425 aa9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 FER1L6-AS2Q96M78 137 aa9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 RASL11BQ9BPW5 248 aa9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 TRAV5A0A0B4J249 113 aa9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 LINC00473A8K010 186 aa9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 RFPL3SP0C7P2 107 aa9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 SRFP11831 508 aa9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 AZU1P20160 251 aa9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 HOXA4Q00056 320 aaPredicted RBP9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 ADAMTSL5Q6ZMM2 481 aa9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 WFDC3Q8IUB2 231 aa9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 BCL6BQ8N143 479 aaPredicted RBP9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 GCSAMQ8N6F7 178 aa9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 LINC00479Q96M42 142 aa9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 ATP6V0BQ99437 205 aa9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 KBTBD11-OT1A0A1B0GTJ5 212 aa9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 SMIM27A0A1W2PRY6 76 aa9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 C2CD4DB7Z1M9 353 aa9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 TTC32Q5I0X7 151 aa9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 ACP7Q6ZNF0 438 aa9.34□□□□□ -0.91
CRNKL1-204ENST00000490910 KIAA1549LQ6ZVL6 1849 aa9.33□□□□□ -0.92
CRNKL1-204ENST00000490910 A0A1B0GW15 77 aa9.33□□□□□ -0.92
CRNKL1-204ENST00000490910 COX8AP10176 69 aa9.33□□□□□ -0.92
CRNKL1-204ENST00000490910 CCL4P13236 92 aa9.33□□□□□ -0.92
CRNKL1-204ENST00000490910 LINC00205P59089 165 aa9.33□□□□□ -0.92
CRNKL1-204ENST00000490910 GAGE13Q4V321 117 aa9.33□□□□□ -0.92
CRNKL1-204ENST00000490910 Q6P435 159 aa9.33□□□□□ -0.92
CRNKL1-204ENST00000490910 INO80CQ6PI98 192 aaPredicted RBP9.33□□□□□ -0.92
CRNKL1-204ENST00000490910 TSSC4Q9Y5U2 329 aaPredicted RBP9.33□□□□□ -0.92
CRNKL1-204ENST00000490910 M0R1B8 84 aa9.33□□□□□ -0.92
CRNKL1-204ENST00000490910 HBDP02042 147 aa9.33□□□□□ -0.92
CRNKL1-204ENST00000490910 APELAP0DMC3 54 aa9.33□□□□□ -0.92
CRNKL1-204ENST00000490910 REG1BP48304 166 aa9.33□□□□□ -0.92
CRNKL1-204ENST00000490910 ORMDL3Q8N138 153 aa9.33□□□□□ -0.92
CRNKL1-204ENST00000490910 KLF14Q8TD94 323 aaPredicted RBP9.33□□□□□ -0.92
CRNKL1-204ENST00000490910 SCNM1Q9BWG6 230 aa9.33□□□□□ -0.92
CRNKL1-204ENST00000490910 UFC1Q9Y3C8 167 aa9.33□□□□□ -0.92
CRNKL1-204ENST00000490910 PCNX3Q9H6A9 2034 aa9.33□□□□□ -0.92
CRNKL1-204ENST00000490910 MOSP00540 346 aa9.33□□□□□ -0.92
CRNKL1-204ENST00000490910 MEOX1P50221 254 aa9.33□□□□□ -0.92
CRNKL1-204ENST00000490910 PSG7Q13046 419 aa9.33□□□□□ -0.92
CRNKL1-204ENST00000490910 HCP5Q6MZN7 132 aa9.33□□□□□ -0.92
CRNKL1-204ENST00000490910 IFI27L1Q96BM0 104 aa9.33□□□□□ -0.92
CRNKL1-204ENST00000490910 TMEM160Q9NX00 188 aa9.33□□□□□ -0.92
CRNKL1-204ENST00000490910 PI4KAP42356 2102 aa9.33□□□□□ -0.92
CRNKL1-204ENST00000490910 J3QW42 95 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms