RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 CASC10Q5T4H9 136 aa13.05□□□□□ -0.32
SEC13-218ENST00000490283 ZNF600Q6ZNG1 722 aa13.05□□□□□ -0.32
SEC13-218ENST00000490283 Q6ZRM9 215 aa13.05□□□□□ -0.32
SEC13-218ENST00000490283 GPR146Q96CH1 333 aa13.05□□□□□ -0.32
SEC13-218ENST00000490283 OR10C1Q96KK4 312 aa13.05□□□□□ -0.32
SEC13-218ENST00000490283 RHPN1-AS1Q9BWJ2 59 aa13.05□□□□□ -0.32
SEC13-218ENST00000490283 TMEM56-RWDD3S4R434 201 aa13.05□□□□□ -0.32
SEC13-218ENST00000490283 CD5P06127 495 aa13.04□□□□□ -0.32
SEC13-218ENST00000490283 SULT1A3P0DMM9 295 aa13.04□□□□□ -0.32
SEC13-218ENST00000490283 SULT1A4P0DMN0 295 aa13.04□□□□□ -0.32
SEC13-218ENST00000490283 AARDQ4LEZ3 155 aa13.04□□□□□ -0.32
SEC13-218ENST00000490283 EDA2RQ9HAV5 297 aa13.04□□□□□ -0.32
SEC13-218ENST00000490283 RETNQ9HD89 108 aa13.04□□□□□ -0.32
SEC13-218ENST00000490283 CHEK1O14757 476 aa13.03□□□□□ -0.32
SEC13-218ENST00000490283 PAFAH1B2P68402 229 aa13.03□□□□□ -0.32
SEC13-218ENST00000490283 TMEM187Q14656 261 aa13.03□□□□□ -0.32
SEC13-218ENST00000490283 PVRIGQ6DKI7 326 aa13.03□□□□□ -0.32
SEC13-218ENST00000490283 NOXA1Q86UR1 476 aa13.03□□□□□ -0.32
SEC13-218ENST00000490283 TMEM230Q96A57 120 aa13.03□□□□□ -0.32
SEC13-218ENST00000490283 RNF2Q99496 336 aa13.03□□□□□ -0.32
SEC13-218ENST00000490283 FAM110AQ9BQ89 295 aa13.03□□□□□ -0.32
SEC13-218ENST00000490283 TMEM231Q9H6L2 316 aa13.03□□□□□ -0.32
SEC13-218ENST00000490283 UBQLN2Q9UHD9 624 aa13.03□□□□□ -0.32
SEC13-218ENST00000490283 PUS1Q9Y606 427 aaKnown RBP eCLIP13.03□□□□□ -0.32
SEC13-218ENST00000490283 IGHV3-49A0A0A0MS15 119 aa13.02□□□□□ -0.33
SEC13-218ENST00000490283 A0A0B4J2A0 478 aa13.02□□□□□ -0.33
SEC13-218ENST00000490283 ZNF701M0R085 212 aaPredicted RBP13.02□□□□□ -0.33
SEC13-218ENST00000490283 CLN5O75503 358 aa13.02□□□□□ -0.33
SEC13-218ENST00000490283 TMEM50AO95807 157 aa13.02□□□□□ -0.33
SEC13-218ENST00000490283 APOC4P55056 127 aa13.02□□□□□ -0.33
SEC13-218ENST00000490283 CMC4P56277 68 aaPredicted RBP13.02□□□□□ -0.33
SEC13-218ENST00000490283 KLF9Q13886 244 aaPredicted RBP13.02□□□□□ -0.33
SEC13-218ENST00000490283 SPANXN2Q5MJ10 180 aa13.02□□□□□ -0.33
SEC13-218ENST00000490283 TOMM20LQ6UXN7 152 aa13.02□□□□□ -0.33
SEC13-218ENST00000490283 LGI3Q8N145 548 aa13.02□□□□□ -0.33
SEC13-218ENST00000490283 SLC24A4Q8NFF2 622 aa13.02□□□□□ -0.33
SEC13-218ENST00000490283 OR4X1Q8NH49 305 aa13.02□□□□□ -0.33
SEC13-218ENST00000490283 IL17DQ8TAD2 202 aa13.02□□□□□ -0.33
SEC13-218ENST00000490283 DEDD2Q8WXF8 326 aa13.02□□□□□ -0.33
SEC13-218ENST00000490283 SHPKQ9UHJ6 478 aa13.02□□□□□ -0.33
SEC13-218ENST00000490283 V9GYH0 126 aa13.02□□□□□ -0.33
SEC13-218ENST00000490283 TRAV30A0A087WSZ9 112 aa13.01□□□□□ -0.33
SEC13-218ENST00000490283 INPP1P49441 399 aa13.01□□□□□ -0.33
SEC13-218ENST00000490283 CCR6P51684 374 aa13.01□□□□□ -0.33
SEC13-218ENST00000490283 BSXQ3C1V8 233 aa13.01□□□□□ -0.33
SEC13-218ENST00000490283 C2orf83Q53S99 150 aa13.01□□□□□ -0.33
SEC13-218ENST00000490283 ZFAND6Q6FIF0 208 aa13.01□□□□□ -0.33
SEC13-218ENST00000490283 ETFRF1Q6IPR1 90 aa13.01□□□□□ -0.33
SEC13-218ENST00000490283 TMED4Q7Z7H5 227 aa13.01□□□□□ -0.33
SEC13-218ENST00000490283 RNASEH2CQ8TDP1 164 aaKnown RBP13.01□□□□□ -0.33
SEC13-218ENST00000490283 TRIM63Q969Q1 353 aa13.01□□□□□ -0.33
SEC13-218ENST00000490283 NARS2Q96I59 477 aaKnown RBP13.01□□□□□ -0.33
SEC13-218ENST00000490283 IGKV3-7A0A075B6H7 116 aa13□□□□□ -0.33
SEC13-218ENST00000490283 IGHV3OR16-13A0A075B7E8 117 aa13□□□□□ -0.33
SEC13-218ENST00000490283 IGHV3-74A0A0B4J1X5 117 aa13□□□□□ -0.33
SEC13-218ENST00000490283 NXPH3O95157 252 aa13□□□□□ -0.33
SEC13-218ENST00000490283 SLC25A4P12235 298 aa13□□□□□ -0.33
SEC13-218ENST00000490283 NPY1RP25929 384 aa13□□□□□ -0.33
SEC13-218ENST00000490283 TFPI2P48307 235 aa13□□□□□ -0.33
SEC13-218ENST00000490283 SMCO1Q147U7 214 aa13□□□□□ -0.33
SEC13-218ENST00000490283 SLC25A21Q9BQT8 299 aaPredicted RBP13□□□□□ -0.33
SEC13-218ENST00000490283 FNDC4Q9H6D8 234 aaPredicted RBP13□□□□□ -0.33
SEC13-218ENST00000490283 PRR13Q9NZ81 148 aa13□□□□□ -0.33
SEC13-218ENST00000490283 A0A1W2PS18 150 aa12.99□□□□□ -0.33
SEC13-218ENST00000490283 IFNA10P01566 189 aa12.99□□□□□ -0.33
SEC13-218ENST00000490283 NPPCP23582 126 aa12.99□□□□□ -0.33
SEC13-218ENST00000490283 RPL11P62913 178 aaKnown RBP12.99□□□□□ -0.33
SEC13-218ENST00000490283 ODF3L2Q3SX64 289 aa12.99□□□□□ -0.33
SEC13-218ENST00000490283 TMEM128Q5BJH2 165 aa12.99□□□□□ -0.33
SEC13-218ENST00000490283 TCF24Q7RTU0 167 aa12.99□□□□□ -0.33
SEC13-218ENST00000490283 CCDC190Q86UF4 302 aa12.99□□□□□ -0.33
SEC13-218ENST00000490283 METTL26Q96S19 204 aa12.99□□□□□ -0.33
SEC13-218ENST00000490283 RBM38Q9H0Z9 239 aaKnown RBP12.99□□□□□ -0.33
SEC13-218ENST00000490283 DUXBA0A1W2PPF3 345 aa12.98□□□□□ -0.33
SEC13-218ENST00000490283 DNASE2O00115 360 aaPredicted RBP12.98□□□□□ -0.33
SEC13-218ENST00000490283 UBE2CO00762 179 aa12.98□□□□□ -0.33
SEC13-218ENST00000490283 VAMP1P23763 118 aa12.98□□□□□ -0.33
SEC13-218ENST00000490283 SUPT4H1P63272 117 aaKnown RBP12.98□□□□□ -0.33
SEC13-218ENST00000490283 TNFRSF9Q07011 255 aa12.98□□□□□ -0.33
SEC13-218ENST00000490283 ZNF79Q15937 498 aa12.98□□□□□ -0.33
SEC13-218ENST00000490283 NMSQ5H8A3 153 aa12.98□□□□□ -0.33
SEC13-218ENST00000490283 LYZL2Q7Z4W2 148 aa12.98□□□□□ -0.33
SEC13-218ENST00000490283 STPG3Q8N7X2 389 aa12.98□□□□□ -0.33
SEC13-218ENST00000490283 OR1S2Q8NGQ3 325 aa12.98□□□□□ -0.33
SEC13-218ENST00000490283 OR1S1Q8NH92 325 aa12.98□□□□□ -0.33
SEC13-218ENST00000490283 ST8SIA2Q92186 375 aa12.98□□□□□ -0.33
SEC13-218ENST00000490283 ZNF414Q96IQ9 312 aa12.98□□□□□ -0.33
SEC13-218ENST00000490283 ZFAND3Q9H8U3 227 aa12.98□□□□□ -0.33
SEC13-218ENST00000490283 A0A1B0GU03 582 aa12.97□□□□□ -0.33
SEC13-218ENST00000490283 RND2P52198 227 aa12.97□□□□□ -0.33
SEC13-218ENST00000490283 MLANAQ16655 118 aa12.97□□□□□ -0.33
SEC13-218ENST00000490283 TRIQKQ629K1 86 aa12.97□□□□□ -0.33
SEC13-218ENST00000490283 GBGT1Q8N5D6 347 aa12.97□□□□□ -0.33
SEC13-218ENST00000490283 DTD1Q8TEA8 209 aa12.97□□□□□ -0.33
SEC13-218ENST00000490283 GRAMD2BQ96HH9 432 aa12.97□□□□□ -0.33
SEC13-218ENST00000490283 VSIRQ9H7M9 311 aa12.97□□□□□ -0.33
SEC13-218ENST00000490283 HSPB7Q9UBY9 170 aa12.97□□□□□ -0.33
SEC13-218ENST00000490283 U3KQ87 197 aa12.97□□□□□ -0.33
SEC13-218ENST00000490283 IGHV3-66A0A0C4DH42 116 aa12.96□□□□□ -0.33
SEC13-218ENST00000490283 KIR2DL5BA0A0G2JN68 375 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms