RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 CHRDL1Q9BU40 450 aa4.75□□□□□ -1.65
LRCH3-216ENST00000481048 CSTL1Q9H114 145 aa4.75□□□□□ -1.65
LRCH3-216ENST00000481048 TMEM14BQ9NUH8 114 aa4.75□□□□□ -1.65
LRCH3-216ENST00000481048 EHFQ9NZC4 300 aa4.75□□□□□ -1.65
LRCH3-216ENST00000481048 SMPXQ9UHP9 88 aa4.75□□□□□ -1.65
LRCH3-216ENST00000481048 OR51B2Q9Y5P1 312 aa4.75□□□□□ -1.65
LRCH3-216ENST00000481048 TRAV14DV4A0A0A6YYC5 116 aa4.74□□□□□ -1.65
LRCH3-216ENST00000481048 TRAV2A0A0B4J234 112 aa4.74□□□□□ -1.65
LRCH3-216ENST00000481048 IGHV7-4-1A0A0J9YVY3 117 aa4.74□□□□□ -1.65
LRCH3-216ENST00000481048 LOC100506127A0A0U1RQW1 187 aa4.74□□□□□ -1.65
LRCH3-216ENST00000481048 MPTX1A8MV57 137 aa4.74□□□□□ -1.65
LRCH3-216ENST00000481048 CHEK1O14757 476 aa4.74□□□□□ -1.65
LRCH3-216ENST00000481048 DFFBO76075 338 aa4.74□□□□□ -1.65
LRCH3-216ENST00000481048 KRASP01116 189 aa4.74□□□□□ -1.65
LRCH3-216ENST00000481048 RLN1P04808 185 aa4.74□□□□□ -1.65
LRCH3-216ENST00000481048 CTSDP07339 412 aaPredicted RBP4.74□□□□□ -1.65
LRCH3-216ENST00000481048 RPA2P15927 270 aa4.74□□□□□ -1.65
LRCH3-216ENST00000481048 PRSS3P35030 304 aa4.74□□□□□ -1.65
LRCH3-216ENST00000481048 LPAR6P43657 344 aa4.74□□□□□ -1.65
LRCH3-216ENST00000481048 RFX2P48378 723 aa4.74□□□□□ -1.65
LRCH3-216ENST00000481048 MFAP2P55001 183 aa4.74□□□□□ -1.65
LRCH3-216ENST00000481048 UCP3P55916 312 aa4.74□□□□□ -1.65
LRCH3-216ENST00000481048 ERHP84090 104 aaKnown RBP4.74□□□□□ -1.65
LRCH3-216ENST00000481048 PMS2P11Q13670 270 aa4.74□□□□□ -1.65
LRCH3-216ENST00000481048 ODF1Q14990 250 aa4.74□□□□□ -1.65
LRCH3-216ENST00000481048 Q56UQ5 140 aa4.74□□□□□ -1.65
LRCH3-216ENST00000481048 UBE2NLQ5JXB2 153 aa4.74□□□□□ -1.65
LRCH3-216ENST00000481048 ZNF114Q8NC26 417 aa4.74□□□□□ -1.65
LRCH3-216ENST00000481048 TMEM116Q8NCL8 245 aa4.74□□□□□ -1.65
LRCH3-216ENST00000481048 OR5H2Q8NGV7 314 aa4.74□□□□□ -1.65
LRCH3-216ENST00000481048 PHLDA1Q8WV24 401 aaPredicted RBP4.74□□□□□ -1.65
LRCH3-216ENST00000481048 FCAMRQ8WWV6 532 aa4.74□□□□□ -1.65
LRCH3-216ENST00000481048 RARRES2Q99969 163 aa4.74□□□□□ -1.65
LRCH3-216ENST00000481048 C20orf24Q9BUV8 137 aa4.74□□□□□ -1.65
LRCH3-216ENST00000481048 RHPN1-AS1Q9BWJ2 59 aa4.74□□□□□ -1.65
LRCH3-216ENST00000481048 NXF2Q9GZY0 626 aaKnown RBP4.74□□□□□ -1.65
LRCH3-216ENST00000481048 MFFQ9GZY8 342 aa4.74□□□□□ -1.65
LRCH3-216ENST00000481048 UBQLN2Q9UHD9 624 aa4.74□□□□□ -1.65
LRCH3-216ENST00000481048 C15orf61A6NNL5 157 aa4.73□□□□□ -1.65
LRCH3-216ENST00000481048 INS-IGF2F8WCM5 200 aa4.73□□□□□ -1.65
LRCH3-216ENST00000481048 I3L2K1 104 aa4.73□□□□□ -1.65
LRCH3-216ENST00000481048 YIF1AO95070 293 aa4.73□□□□□ -1.65
LRCH3-216ENST00000481048 IFNA4P05014 189 aa4.73□□□□□ -1.65
LRCH3-216ENST00000481048 G6PCP35575 357 aa4.73□□□□□ -1.65
LRCH3-216ENST00000481048 NPBWR1P48145 328 aa4.73□□□□□ -1.65
LRCH3-216ENST00000481048 TSPAN5P62079 268 aa4.73□□□□□ -1.65
LRCH3-216ENST00000481048 PRCDQ00LT1 54 aa4.73□□□□□ -1.65
LRCH3-216ENST00000481048 EWSR1Q01844 656 aaKnown RBP eCLIP4.73□□□□□ -1.65
LRCH3-216ENST00000481048 TMEM41BQ5BJD5 291 aa4.73□□□□□ -1.65
LRCH3-216ENST00000481048 TMEM69Q5SWH9 247 aa4.73□□□□□ -1.65
LRCH3-216ENST00000481048 FAM90A2PQ658T7 463 aa4.73□□□□□ -1.65
LRCH3-216ENST00000481048 H2BFWTQ7Z2G1 175 aa4.73□□□□□ -1.65
LRCH3-216ENST00000481048 UBAC2Q8NBM4 344 aa4.73□□□□□ -1.65
LRCH3-216ENST00000481048 DUSP18Q8NEJ0 188 aa4.73□□□□□ -1.65
LRCH3-216ENST00000481048 OR4A16Q8NH70 328 aa4.73□□□□□ -1.65
LRCH3-216ENST00000481048 SEC22AQ96IW7 307 aa4.73□□□□□ -1.65
LRCH3-216ENST00000481048 RNF2Q99496 336 aa4.73□□□□□ -1.65
LRCH3-216ENST00000481048 GINS3Q9BRX5 216 aa4.73□□□□□ -1.65
LRCH3-216ENST00000481048 HINT2Q9BX68 163 aa4.73□□□□□ -1.65
LRCH3-216ENST00000481048 C11orf68Q9H3H3 251 aaKnown RBP4.73□□□□□ -1.65
LRCH3-216ENST00000481048 RNF167Q9H6Y7 350 aa4.73□□□□□ -1.65
LRCH3-216ENST00000481048 NSG2Q9Y328 171 aa4.73□□□□□ -1.65
LRCH3-216ENST00000481048 SELENOKQ9Y6D0 94 aa4.73□□□□□ -1.65
LRCH3-216ENST00000481048 PLECQ15149 4684 aaKnown RBP4.73□□□□□ -1.65
LRCH3-216ENST00000481048 ALMS1Q8TCU4 4167 aa4.72□□□□□ -1.65
LRCH3-216ENST00000481048 SMIM31A0A1B0GVY4 71 aa4.72□□□□□ -1.65
LRCH3-216ENST00000481048 CORTO00230 105 aa4.72□□□□□ -1.65
LRCH3-216ENST00000481048 GNG7O60262 68 aa4.72□□□□□ -1.65
LRCH3-216ENST00000481048 ATG12O94817 140 aa4.72□□□□□ -1.65
LRCH3-216ENST00000481048 ATP6V1G2O95670 118 aa4.72□□□□□ -1.65
LRCH3-216ENST00000481048 PMP2P02689 132 aa4.72□□□□□ -1.65
LRCH3-216ENST00000481048 EIF4EP06730 217 aaKnown RBP4.72□□□□□ -1.65
LRCH3-216ENST00000481048 FCER2P06734 321 aa4.72□□□□□ -1.65
LRCH3-216ENST00000481048 RPL35AP18077 110 aaKnown RBP4.72□□□□□ -1.65
LRCH3-216ENST00000481048 HRH1P35367 487 aa4.72□□□□□ -1.65
LRCH3-216ENST00000481048 SUB1P53999 127 aaKnown RBP eCLIP4.72□□□□□ -1.65
LRCH3-216ENST00000481048 TAS2R20P59543 309 aa4.72□□□□□ -1.65
LRCH3-216ENST00000481048 HSPE1P61604 102 aaKnown RBP4.72□□□□□ -1.65
LRCH3-216ENST00000481048 KCTD21Q4G0X4 260 aa4.72□□□□□ -1.65
LRCH3-216ENST00000481048 RNASE12Q5GAN4 147 aaKnown RBP4.72□□□□□ -1.65
LRCH3-216ENST00000481048 LCE1EQ5T753 118 aa4.72□□□□□ -1.65
LRCH3-216ENST00000481048 SAMD12Q8N8I0 201 aa4.72□□□□□ -1.65
LRCH3-216ENST00000481048 C11orf45Q8TAV5 145 aa4.72□□□□□ -1.65
LRCH3-216ENST00000481048 GPX8Q8TED1 209 aa4.72□□□□□ -1.65
LRCH3-216ENST00000481048 SLC25A46Q96AG3 418 aa4.72□□□□□ -1.65
LRCH3-216ENST00000481048 ZNF486Q96H40 463 aaPredicted RBP4.72□□□□□ -1.65
LRCH3-216ENST00000481048 HRH4Q9H3N8 390 aa4.72□□□□□ -1.65
LRCH3-216ENST00000481048 TMEM231Q9H6L2 316 aa4.72□□□□□ -1.65
LRCH3-216ENST00000481048 VSIRQ9H7M9 311 aa4.72□□□□□ -1.65
LRCH3-216ENST00000481048 SCPEP1Q9HB40 452 aa4.72□□□□□ -1.65
LRCH3-216ENST00000481048 FRAS1Q86XX4 4008 aa4.71□□□□□ -1.65
LRCH3-216ENST00000481048 IGHV3-21A0A0B4J1V1 117 aa4.71□□□□□ -1.66
LRCH3-216ENST00000481048 A0A1W2PS18 150 aa4.71□□□□□ -1.66
LRCH3-216ENST00000481048 MEIS3P1A6NDR6 274 aa4.71□□□□□ -1.66
LRCH3-216ENST00000481048 C11orf94C9JXX5 98 aa4.71□□□□□ -1.66
LRCH3-216ENST00000481048 DNASE2O00115 360 aaPredicted RBP4.71□□□□□ -1.66
LRCH3-216ENST00000481048 ZNF207O43670 478 aaKnown RBP4.71□□□□□ -1.66
LRCH3-216ENST00000481048 SCGB2A1O75556 95 aa4.71□□□□□ -1.66
LRCH3-216ENST00000481048 B3GALNT1O75752 331 aa4.71□□□□□ -1.66
LRCH3-216ENST00000481048 MT-CO2P00403 227 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms