RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 OPRK1P41145 380 aa20.46■□□□□ 0.87
CCM2-211ENST00000478582 POLR2GP62487 172 aaKnown RBP eCLIP20.46■□□□□ 0.87
CCM2-211ENST00000478582 Q56UQ5 140 aa20.46■□□□□ 0.87
CCM2-211ENST00000478582 RPS10-NUDT3A0A1W2PQS6 291 aa20.45■□□□□ 0.86
CCM2-211ENST00000478582 C7orf66A4D0T2 115 aa20.45■□□□□ 0.86
CCM2-211ENST00000478582 C5orf51A6NDU8 294 aa20.45■□□□□ 0.86
CCM2-211ENST00000478582 FAM25EA8MYX2 175 aa20.45■□□□□ 0.86
CCM2-211ENST00000478582 LGALS9O00182 355 aa20.45■□□□□ 0.86
CCM2-211ENST00000478582 WRBO00258 174 aa20.45■□□□□ 0.86
CCM2-211ENST00000478582 CTSGP08311 255 aa20.45■□□□□ 0.86
CCM2-211ENST00000478582 INSL3P51460 131 aa20.45■□□□□ 0.86
CCM2-211ENST00000478582 RPP30P78346 268 aaKnown RBP20.45■□□□□ 0.86
CCM2-211ENST00000478582 GSG1LQ6UXU4 331 aa20.45■□□□□ 0.86
CCM2-211ENST00000478582 OR9G4Q8NGQ1 327 aa20.45■□□□□ 0.86
CCM2-211ENST00000478582 MRAPQ8TCY5 172 aa20.45■□□□□ 0.86
CCM2-211ENST00000478582 C15orf62A8K5M9 175 aa20.44■□□□□ 0.86
CCM2-211ENST00000478582 IGHV3-48P01763 117 aa20.44■□□□□ 0.86
CCM2-211ENST00000478582 ADMP35318 185 aa20.44■□□□□ 0.86
CCM2-211ENST00000478582 NPBWR1P48145 328 aa20.44■□□□□ 0.86
CCM2-211ENST00000478582 MLANAQ16655 118 aa20.44■□□□□ 0.86
CCM2-211ENST00000478582 FAM106AQ4KMX7 169 aa20.44■□□□□ 0.86
CCM2-211ENST00000478582 UBAC2Q8NBM4 344 aa20.44■□□□□ 0.86
CCM2-211ENST00000478582 CHRDL1Q9BU40 450 aa20.44■□□□□ 0.86
CCM2-211ENST00000478582 ELOVL1Q9BW60 279 aa20.44■□□□□ 0.86
CCM2-211ENST00000478582 MBPP02686 304 aaPredicted RBP20.43■□□□□ 0.86
CCM2-211ENST00000478582 EGFEM1PQ0D2K5 195 aa20.43■□□□□ 0.86
CCM2-211ENST00000478582 IL15RAQ13261 267 aa20.43■□□□□ 0.86
CCM2-211ENST00000478582 RGS21Q2M5E4 152 aa20.43■□□□□ 0.86
CCM2-211ENST00000478582 ETFRF1Q6IPR1 90 aa20.43■□□□□ 0.86
CCM2-211ENST00000478582 OR4X1Q8NH49 305 aa20.43■□□□□ 0.86
CCM2-211ENST00000478582 SMIM8Q96KF7 97 aa20.43■□□□□ 0.86
CCM2-211ENST00000478582 ZNF436Q9C0F3 470 aaPredicted RBP20.43■□□□□ 0.86
CCM2-211ENST00000478582 ZC4H2Q9NQZ6 224 aa20.43■□□□□ 0.86
CCM2-211ENST00000478582 GNG7O60262 68 aa20.42■□□□□ 0.86
CCM2-211ENST00000478582 SLC25A4P12235 298 aa20.42■□□□□ 0.86
CCM2-211ENST00000478582 RAB11AP62491 216 aa20.42■□□□□ 0.86
CCM2-211ENST00000478582 IL34Q6ZMJ4 242 aa20.42■□□□□ 0.86
CCM2-211ENST00000478582 RAB40CQ96S21 281 aa20.42■□□□□ 0.86
CCM2-211ENST00000478582 PEMTQ9UBM1 199 aa20.42■□□□□ 0.86
CCM2-211ENST00000478582 NUPL2O15504 423 aaKnown RBP20.41■□□□□ 0.86
CCM2-211ENST00000478582 TMEM50AO95807 157 aa20.41■□□□□ 0.86
CCM2-211ENST00000478582 SCGB1D2O95969 90 aa20.41■□□□□ 0.86
CCM2-211ENST00000478582 IFNA4P05014 189 aa20.41■□□□□ 0.86
CCM2-211ENST00000478582 KRTAP10-11P60412 298 aa20.41■□□□□ 0.86
CCM2-211ENST00000478582 CD69Q07108 199 aa20.41■□□□□ 0.86
CCM2-211ENST00000478582 SIGLEC8Q9NYZ4 499 aa20.41■□□□□ 0.86
CCM2-211ENST00000478582 MRPL36Q9P0J6 103 aaKnown RBP20.41■□□□□ 0.86
CCM2-211ENST00000478582 SSSCA1O60232 199 aa20.4■□□□□ 0.86
CCM2-211ENST00000478582 CLN5O75503 358 aa20.4■□□□□ 0.86
CCM2-211ENST00000478582 GPX4P36969 197 aaPredicted RBP20.4■□□□□ 0.86
CCM2-211ENST00000478582 PAX9P55771 341 aa20.4■□□□□ 0.86
CCM2-211ENST00000478582 TAS2R30P59541 319 aa20.4■□□□□ 0.86
CCM2-211ENST00000478582 PRSS54Q6PEW0 395 aa20.4■□□□□ 0.86
CCM2-211ENST00000478582 TMEM116Q8NCL8 245 aa20.4■□□□□ 0.86
CCM2-211ENST00000478582 OR4C12Q96R67 309 aa20.4■□□□□ 0.86
CCM2-211ENST00000478582 PSENENQ9NZ42 101 aa20.4■□□□□ 0.86
CCM2-211ENST00000478582 RCL1Q9Y2P8 373 aaKnown RBP20.4■□□□□ 0.86
CCM2-211ENST00000478582 STRAPQ9Y3F4 350 aaKnown RBP20.4■□□□□ 0.86
CCM2-211ENST00000478582 DNAH3Q8TD57 4116 aa20.39■□□□□ 0.86
CCM2-211ENST00000478582 NDUFA4O00483 81 aa20.39■□□□□ 0.85
CCM2-211ENST00000478582 SAP30O75446 220 aa20.39■□□□□ 0.85
CCM2-211ENST00000478582 CSN3P07498 182 aa20.39■□□□□ 0.85
CCM2-211ENST00000478582 SPANXN5Q5MJ07 72 aa20.39■□□□□ 0.85
CCM2-211ENST00000478582 ZNF414Q96IQ9 312 aa20.39■□□□□ 0.85
CCM2-211ENST00000478582 A8MWP6 167 aa20.38■□□□□ 0.85
CCM2-211ENST00000478582 GOSR2O14653 212 aa20.38■□□□□ 0.85
CCM2-211ENST00000478582 SSNA1O43805 119 aa20.38■□□□□ 0.85
CCM2-211ENST00000478582 RELQ04864 619 aaPredicted RBP20.38■□□□□ 0.85
CCM2-211ENST00000478582 OXA1LQ15070 435 aa20.38■□□□□ 0.85
CCM2-211ENST00000478582 CACNG8Q8WXS5 425 aa20.38■□□□□ 0.85
CCM2-211ENST00000478582 ALG5Q9Y673 324 aa20.38■□□□□ 0.85
CCM2-211ENST00000478582 TRAV30A0A087WSZ9 112 aa20.37■□□□□ 0.85
CCM2-211ENST00000478582 IGHV3-35A0A0C4DH35 117 aa20.37■□□□□ 0.85
CCM2-211ENST00000478582 K7EPK0 472 aa20.37■□□□□ 0.85
CCM2-211ENST00000478582 ELLP55199 621 aaPredicted RBP20.37■□□□□ 0.85
CCM2-211ENST00000478582 UNQ9165/PRO28630Q6UXU0 137 aa20.37■□□□□ 0.85
CCM2-211ENST00000478582 SLC16A13Q7RTY0 426 aa20.37■□□□□ 0.85
CCM2-211ENST00000478582 ZMAT5Q9UDW3 170 aaKnown RBP20.37■□□□□ 0.85
CCM2-211ENST00000478582 ZNF320A2RRD8 509 aa20.36■□□□□ 0.85
CCM2-211ENST00000478582 PRSS46E5RG02 174 aa20.36■□□□□ 0.85
CCM2-211ENST00000478582 K7EIL1 84 aa20.36■□□□□ 0.85
CCM2-211ENST00000478582 TSC22D2O75157 780 aa20.36■□□□□ 0.85
CCM2-211ENST00000478582 SIX6O95475 246 aa20.36■□□□□ 0.85
CCM2-211ENST00000478582 TMEM190Q8WZ59 177 aa20.36■□□□□ 0.85
CCM2-211ENST00000478582 NMES1Q9C002 83 aa20.36■□□□□ 0.85
CCM2-211ENST00000478582 H3BP45 60 aa20.35■□□□□ 0.85
CCM2-211ENST00000478582 SCGB2A1O75556 95 aa20.35■□□□□ 0.85
CCM2-211ENST00000478582 RND2P52198 227 aa20.35■□□□□ 0.85
CCM2-211ENST00000478582 CYCSP99999 105 aaKnown RBP20.35■□□□□ 0.85
CCM2-211ENST00000478582 TMEM14EPQ6UXP3 125 aa20.35■□□□□ 0.85
CCM2-211ENST00000478582 C11orf1Q9H5F2 150 aa20.35■□□□□ 0.85
CCM2-211ENST00000478582 PAIP2BQ9ULR5 123 aaKnown RBP20.35■□□□□ 0.85
CCM2-211ENST00000478582 UFC1Q9Y3C8 167 aa20.35■□□□□ 0.85
CCM2-211ENST00000478582 LSM5Q9Y4Y9 91 aaKnown RBP20.35■□□□□ 0.85
CCM2-211ENST00000478582 WI2-2373I1.2A0A1W2PRP0 233 aa20.34■□□□□ 0.85
CCM2-211ENST00000478582 C2orf70A6NJV1 201 aa20.34■□□□□ 0.85
CCM2-211ENST00000478582 IGLV1-51P01701 117 aa20.34■□□□□ 0.85
CCM2-211ENST00000478582 RAB32Q13637 225 aa20.34■□□□□ 0.85
CCM2-211ENST00000478582 ADAMTSL5Q6ZMM2 481 aa20.34■□□□□ 0.85
CCM2-211ENST00000478582 NPIPB3Q92617 1050 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms