RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 RNF212Q495C1 297 aa7.41□□□□□ -1.22
HDAC3-208ENST00000476739 AARDQ4LEZ3 155 aa7.41□□□□□ -1.22
HDAC3-208ENST00000476739 C9orf66Q5T8R8 295 aa7.41□□□□□ -1.22
HDAC3-208ENST00000476739 ACSM6Q6P461 480 aa7.41□□□□□ -1.22
HDAC3-208ENST00000476739 UQCC3Q6UW78 93 aa7.41□□□□□ -1.22
HDAC3-208ENST00000476739 IL34Q6ZMJ4 242 aa7.41□□□□□ -1.22
HDAC3-208ENST00000476739 FAM219AQ8IW50 185 aa7.41□□□□□ -1.22
HDAC3-208ENST00000476739 IL22RA2Q969J5 263 aa7.41□□□□□ -1.22
HDAC3-208ENST00000476739 PLEKHA3Q9HB20 300 aa7.41□□□□□ -1.22
HDAC3-208ENST00000476739 PRKDCP78527 4128 aaKnown RBP7.4□□□□□ -1.22
HDAC3-208ENST00000476739 MEGF8Q7Z7M0 2845 aa7.4□□□□□ -1.22
HDAC3-208ENST00000476739 A0A0B4J2A0 478 aa7.4□□□□□ -1.22
HDAC3-208ENST00000476739 WI2-2373I1.2A0A1W2PRP0 233 aa7.4□□□□□ -1.22
HDAC3-208ENST00000476739 F8W735 103 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-208ENST00000476739 K7EIM0 57 aa7.4□□□□□ -1.22
HDAC3-208ENST00000476739 SAP30O75446 220 aa7.4□□□□□ -1.22
HDAC3-208ENST00000476739 OR2C1O95371 312 aa7.4□□□□□ -1.22
HDAC3-208ENST00000476739 IFNA17P01571 189 aa7.4□□□□□ -1.22
HDAC3-208ENST00000476739 CLEC3BP05452 202 aa7.4□□□□□ -1.22
HDAC3-208ENST00000476739 ANXA7P20073 488 aaKnown RBP7.4□□□□□ -1.22
HDAC3-208ENST00000476739 AKR1D1P51857 326 aa7.4□□□□□ -1.22
HDAC3-208ENST00000476739 RPEL1Q2QD12 228 aa7.4□□□□□ -1.22
HDAC3-208ENST00000476739 PDLIM3Q53GG5 364 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-208ENST00000476739 LBHQ53QV2 105 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-208ENST00000476739 NMSQ5H8A3 153 aa7.4□□□□□ -1.22
HDAC3-208ENST00000476739 LGI3Q8N145 548 aa7.4□□□□□ -1.22
HDAC3-208ENST00000476739 ZNF114Q8NC26 417 aa7.4□□□□□ -1.22
HDAC3-208ENST00000476739 OR9G4Q8NGQ1 327 aa7.4□□□□□ -1.22
HDAC3-208ENST00000476739 OR1P1Q8NH06 330 aa7.4□□□□□ -1.22
HDAC3-208ENST00000476739 ZNF502Q8TBZ5 544 aa7.4□□□□□ -1.22
HDAC3-208ENST00000476739 SCARB1Q8WTV0 552 aa7.4□□□□□ -1.22
HDAC3-208ENST00000476739 EEF1AKMT3Q96AZ1 226 aa7.4□□□□□ -1.22
HDAC3-208ENST00000476739 OR51M1Q9H341 326 aa7.4□□□□□ -1.22
HDAC3-208ENST00000476739 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-208ENST00000476739 SHPKQ9UHJ6 478 aa7.4□□□□□ -1.22
HDAC3-208ENST00000476739 C9orf170A2RU37 121 aa7.39□□□□□ -1.23
HDAC3-208ENST00000476739 INS-IGF2F8WCM5 200 aa7.39□□□□□ -1.23
HDAC3-208ENST00000476739 I3L2K1 104 aa7.39□□□□□ -1.23
HDAC3-208ENST00000476739 K7EIL1 84 aa7.39□□□□□ -1.23
HDAC3-208ENST00000476739 IGHV3-48P01763 117 aa7.39□□□□□ -1.23
HDAC3-208ENST00000476739 RNASE2P10153 161 aaKnown RBP7.39□□□□□ -1.23
HDAC3-208ENST00000476739 GPR183P32249 361 aa7.39□□□□□ -1.23
HDAC3-208ENST00000476739 ARL3P36405 182 aa7.39□□□□□ -1.23
HDAC3-208ENST00000476739 ERHP84090 104 aaKnown RBP7.39□□□□□ -1.23
HDAC3-208ENST00000476739 ZNF124Q15973 351 aa7.39□□□□□ -1.23
HDAC3-208ENST00000476739 ADAMTSL5Q6ZMM2 481 aa7.39□□□□□ -1.23
HDAC3-208ENST00000476739 LRTM2Q8N967 370 aa7.39□□□□□ -1.23
HDAC3-208ENST00000476739 OR52E5Q8NH55 327 aa7.39□□□□□ -1.23
HDAC3-208ENST00000476739 ZNF414Q96IQ9 312 aa7.39□□□□□ -1.23
HDAC3-208ENST00000476739 CXorf58Q96LI9 332 aa7.39□□□□□ -1.23
HDAC3-208ENST00000476739 PRR25Q96S07 402 aa7.39□□□□□ -1.23
HDAC3-208ENST00000476739 SEC22CQ9BRL7 303 aa7.39□□□□□ -1.23
HDAC3-208ENST00000476739 SLC25A32Q9H2D1 315 aa7.39□□□□□ -1.23
HDAC3-208ENST00000476739 THYN1Q9P016 225 aa7.39□□□□□ -1.23
HDAC3-208ENST00000476739 TRBV7-1A0A0A6YYK4 115 aa7.38□□□□□ -1.23
HDAC3-208ENST00000476739 IGHV3-35A0A0C4DH35 117 aa7.38□□□□□ -1.23
HDAC3-208ENST00000476739 OR2T8A6NH00 312 aa7.38□□□□□ -1.23
HDAC3-208ENST00000476739 GGCTO75223 188 aaKnown RBP7.38□□□□□ -1.23
HDAC3-208ENST00000476739 MT-CO2P00403 227 aa7.38□□□□□ -1.23
HDAC3-208ENST00000476739 CSN3P07498 182 aa7.38□□□□□ -1.23
HDAC3-208ENST00000476739 OR4E1P0C645 316 aa7.38□□□□□ -1.23
HDAC3-208ENST00000476739 SULT1A3P0DMM9 295 aa7.38□□□□□ -1.23
HDAC3-208ENST00000476739 SULT1A4P0DMN0 295 aa7.38□□□□□ -1.23
HDAC3-208ENST00000476739 CD81P60033 236 aa7.38□□□□□ -1.23
HDAC3-208ENST00000476739 SPCS3P61009 180 aa7.38□□□□□ -1.23
HDAC3-208ENST00000476739 DHRS2Q13268 280 aa7.38□□□□□ -1.23
HDAC3-208ENST00000476739 MLANAQ16655 118 aa7.38□□□□□ -1.23
HDAC3-208ENST00000476739 PVRIGQ6DKI7 326 aa7.38□□□□□ -1.23
HDAC3-208ENST00000476739 C12orf45Q8N5I9 185 aaPredicted RBP7.38□□□□□ -1.23
HDAC3-208ENST00000476739 OR52B4Q8NGK2 314 aa7.38□□□□□ -1.23
HDAC3-208ENST00000476739 VN1R17PQ8TDU5 208 aa7.38□□□□□ -1.23
HDAC3-208ENST00000476739 TMEM170AQ8WVE7 144 aa7.38□□□□□ -1.23
HDAC3-208ENST00000476739 PINX1Q96BK5 328 aaKnown RBP7.38□□□□□ -1.23
HDAC3-208ENST00000476739 MISP3Q96FF7 219 aa7.38□□□□□ -1.23
HDAC3-208ENST00000476739 CHRDL1Q9BU40 450 aa7.38□□□□□ -1.23
HDAC3-208ENST00000476739 GPR61Q9BZJ8 451 aa7.38□□□□□ -1.23
HDAC3-208ENST00000476739 C20orf85Q9H1P6 137 aa7.38□□□□□ -1.23
HDAC3-208ENST00000476739 C21orf62Q9NYP8 219 aa7.38□□□□□ -1.23
HDAC3-208ENST00000476739 CBY1Q9Y3M2 126 aa7.38□□□□□ -1.23
HDAC3-208ENST00000476739 DNASE2O00115 360 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-208ENST00000476739 TGOLN2O43493 480 aa7.37□□□□□ -1.23
HDAC3-208ENST00000476739 PITX3O75364 302 aa7.37□□□□□ -1.23
HDAC3-208ENST00000476739 ADAP1O75689 374 aa7.37□□□□□ -1.23
HDAC3-208ENST00000476739 TCRBP04435 133 aa7.37□□□□□ -1.23
HDAC3-208ENST00000476739 HOXB5P09067 269 aa7.37□□□□□ -1.23
HDAC3-208ENST00000476739 ADMP35318 185 aa7.37□□□□□ -1.23
HDAC3-208ENST00000476739 SNCAP37840 140 aa7.37□□□□□ -1.23
HDAC3-208ENST00000476739 RPL35P42766 123 aaKnown RBP7.37□□□□□ -1.23
HDAC3-208ENST00000476739 INSL3P51460 131 aa7.37□□□□□ -1.23
HDAC3-208ENST00000476739 UBE2MP61081 183 aaKnown RBP7.37□□□□□ -1.23
HDAC3-208ENST00000476739 SRPXP78539 464 aa7.37□□□□□ -1.23
HDAC3-208ENST00000476739 SMCO1Q147U7 214 aa7.37□□□□□ -1.23
HDAC3-208ENST00000476739 OPCMLQ14982 345 aa7.37□□□□□ -1.23
HDAC3-208ENST00000476739 GUCA2BQ16661 112 aa7.37□□□□□ -1.23
HDAC3-208ENST00000476739 BSXQ3C1V8 233 aa7.37□□□□□ -1.23
HDAC3-208ENST00000476739 GGNBP1Q5YKI7 109 aa7.37□□□□□ -1.23
HDAC3-208ENST00000476739 UNQ9165/PRO28630Q6UXU0 137 aa7.37□□□□□ -1.23
HDAC3-208ENST00000476739 LYG2Q86SG7 212 aa7.37□□□□□ -1.23
HDAC3-208ENST00000476739 GPHB5Q86YW7 130 aa7.37□□□□□ -1.23
HDAC3-208ENST00000476739 UBAC2Q8NBM4 344 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms