RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 CCDC32Q9BV29 185 aa10.5□□□□□ -0.73
ATG9A-220ENST00000475339 PEMTQ9UBM1 199 aa10.5□□□□□ -0.73
ATG9A-220ENST00000475339 KLK9Q9UKQ9 250 aa10.5□□□□□ -0.73
ATG9A-220ENST00000475339 DMBT1Q9UGM3 2413 aaPredicted RBP10.5□□□□□ -0.73
ATG9A-220ENST00000475339 UBR4Q5T4S7 5183 aa10.5□□□□□ -0.73
ATG9A-220ENST00000475339 A0A0B4J2A0 478 aa10.49□□□□□ -0.73
ATG9A-220ENST00000475339 OR11H12B2RN74 326 aa10.49□□□□□ -0.73
ATG9A-220ENST00000475339 NDUFB6O95139 128 aa10.49□□□□□ -0.73
ATG9A-220ENST00000475339 SULT1A3P0DMM9 295 aa10.49□□□□□ -0.73
ATG9A-220ENST00000475339 SULT1A4P0DMN0 295 aa10.49□□□□□ -0.73
ATG9A-220ENST00000475339 SUB1P53999 127 aaKnown RBP eCLIP10.49□□□□□ -0.737e-7■□□□□ 10.6
ATG9A-220ENST00000475339 SUPT4H1P63272 117 aaKnown RBP10.49□□□□□ -0.73
ATG9A-220ENST00000475339 ZNF575Q86XF7 245 aa10.49□□□□□ -0.73
ATG9A-220ENST00000475339 ZNF502Q8TBZ5 544 aa10.49□□□□□ -0.73
ATG9A-220ENST00000475339 GPR146Q96CH1 333 aa10.49□□□□□ -0.73
ATG9A-220ENST00000475339 C21orf62Q9NYP8 219 aa10.49□□□□□ -0.73
ATG9A-220ENST00000475339 CACFD1Q9UGQ2 172 aa10.49□□□□□ -0.73
ATG9A-220ENST00000475339 SHPKQ9UHJ6 478 aa10.49□□□□□ -0.73
ATG9A-220ENST00000475339 DMRT1Q9Y5R6 373 aa10.49□□□□□ -0.73
ATG9A-220ENST00000475339 IGHV3-21A0A0B4J1V1 117 aa10.48□□□□□ -0.73
ATG9A-220ENST00000475339 CEBPZOSA8MTT3 80 aa10.48□□□□□ -0.73
ATG9A-220ENST00000475339 HLA-AP01891 365 aaKnown RBP10.48□□□□□ -0.73
ATG9A-220ENST00000475339 CLEC3BP05452 202 aa10.48□□□□□ -0.73
ATG9A-220ENST00000475339 CSN3P07498 182 aa10.48□□□□□ -0.73
ATG9A-220ENST00000475339 MFAP2P55001 183 aa10.48□□□□□ -0.73
ATG9A-220ENST00000475339 SPCS3P61009 180 aa10.48□□□□□ -0.73
ATG9A-220ENST00000475339 UBE2MP61081 183 aaKnown RBP10.48□□□□□ -0.73
ATG9A-220ENST00000475339 PPP1R1AQ13522 171 aa10.48□□□□□ -0.73
ATG9A-220ENST00000475339 Q56UQ5 140 aa10.48□□□□□ -0.73
ATG9A-220ENST00000475339 UBAC2Q8NBM4 344 aa10.48□□□□□ -0.73
ATG9A-220ENST00000475339 ZNF114Q8NC26 417 aa10.48□□□□□ -0.73
ATG9A-220ENST00000475339 OR52E5Q8NH55 327 aa10.48□□□□□ -0.73
ATG9A-220ENST00000475339 PINX1Q96BK5 328 aaKnown RBP10.48□□□□□ -0.73
ATG9A-220ENST00000475339 WDR12Q9GZL7 423 aaKnown RBP10.48□□□□□ -0.73
ATG9A-220ENST00000475339 ZC4H2Q9NQZ6 224 aa10.48□□□□□ -0.73
ATG9A-220ENST00000475339 DUXBA0A1W2PPF3 345 aa10.47□□□□□ -0.73
ATG9A-220ENST00000475339 OR2T8A6NH00 312 aa10.47□□□□□ -0.73
ATG9A-220ENST00000475339 OR2C1O95371 312 aa10.47□□□□□ -0.73
ATG9A-220ENST00000475339 SFT2D2O95562 160 aa10.47□□□□□ -0.73
ATG9A-220ENST00000475339 SMCO1Q147U7 214 aa10.47□□□□□ -0.73
ATG9A-220ENST00000475339 FAM106AQ4KMX7 169 aa10.47□□□□□ -0.73
ATG9A-220ENST00000475339 PLET1Q6UQ28 207 aa10.47□□□□□ -0.73
ATG9A-220ENST00000475339 Q6ZRM9 215 aa10.47□□□□□ -0.73
ATG9A-220ENST00000475339 LYZL2Q7Z4W2 148 aa10.47□□□□□ -0.73
ATG9A-220ENST00000475339 MAPKAPK5-AS1Q8N8E1 139 aa10.47□□□□□ -0.73
ATG9A-220ENST00000475339 HEYLQ9NQ87 328 aaPredicted RBP10.47□□□□□ -0.73
ATG9A-220ENST00000475339 ZNF320A2RRD8 509 aa10.46□□□□□ -0.73
ATG9A-220ENST00000475339 INS-IGF2F8WCM5 200 aa10.46□□□□□ -0.73
ATG9A-220ENST00000475339 CORTO00230 105 aa10.46□□□□□ -0.73
ATG9A-220ENST00000475339 LYRM1O43325 122 aa10.46□□□□□ -0.73
ATG9A-220ENST00000475339 TGOLN2O43493 480 aa10.46□□□□□ -0.73
ATG9A-220ENST00000475339 NXPH3O95157 252 aa10.46□□□□□ -0.73
ATG9A-220ENST00000475339 ZNF846Q147U1 533 aa10.46□□□□□ -0.73
ATG9A-220ENST00000475339 AARDQ4LEZ3 155 aa10.46□□□□□ -0.73
ATG9A-220ENST00000475339 C4orf46Q504U0 113 aa10.46□□□□□ -0.73
ATG9A-220ENST00000475339 OR1S1Q8NH92 325 aa10.46□□□□□ -0.73
ATG9A-220ENST00000475339 DYNLRB2Q8TF09 96 aa10.46□□□□□ -0.73
ATG9A-220ENST00000475339 SCARB1Q8WTV0 552 aa10.46□□□□□ -0.73
ATG9A-220ENST00000475339 BSCL2Q96G97 398 aaPredicted RBP10.46□□□□□ -0.73
ATG9A-220ENST00000475339 FLVCR2Q9UPI3 526 aa10.46□□□□□ -0.73
ATG9A-220ENST00000475339 ZNF785A8K8V0 405 aa10.45□□□□□ -0.74
ATG9A-220ENST00000475339 K7EIM0 57 aa10.45□□□□□ -0.74
ATG9A-220ENST00000475339 MT-CO2P00403 227 aa10.45□□□□□ -0.74
ATG9A-220ENST00000475339 BTCP35070 178 aa10.45□□□□□ -0.74
ATG9A-220ENST00000475339 HTR2BP41595 481 aa10.45□□□□□ -0.74
ATG9A-220ENST00000475339 ANKRD55Q3KP44 614 aa10.45□□□□□ -0.74
ATG9A-220ENST00000475339 NMSQ5H8A3 153 aa10.45□□□□□ -0.74
ATG9A-220ENST00000475339 SPSB3Q6PJ21 355 aa10.45□□□□□ -0.74
ATG9A-220ENST00000475339 GPHB5Q86YW7 130 aa10.45□□□□□ -0.74
ATG9A-220ENST00000475339 COQ8AQ8NI60 647 aa10.45□□□□□ -0.74
ATG9A-220ENST00000475339 RNF183Q96D59 192 aa10.45□□□□□ -0.74
ATG9A-220ENST00000475339 ATP6V0BQ99437 205 aa10.45□□□□□ -0.74
ATG9A-220ENST00000475339 IGHV3-35A0A0C4DH35 117 aa10.44□□□□□ -0.74
ATG9A-220ENST00000475339 A0A1B0GU03 582 aa10.44□□□□□ -0.74
ATG9A-220ENST00000475339 LGALS9O00182 355 aa10.44□□□□□ -0.74
ATG9A-220ENST00000475339 NUPL2O15504 423 aaKnown RBP10.44□□□□□ -0.74
ATG9A-220ENST00000475339 RNASE2P10153 161 aaKnown RBP10.44□□□□□ -0.74
ATG9A-220ENST00000475339 ATF4P18848 351 aaPredicted RBP10.44□□□□□ -0.74
ATG9A-220ENST00000475339 ANXA7P20073 488 aaKnown RBP10.44□□□□□ -0.74
ATG9A-220ENST00000475339 MFAP4P55083 255 aa10.44□□□□□ -0.74
ATG9A-220ENST00000475339 CD300EQ496F6 205 aaPredicted RBP10.44□□□□□ -0.74
ATG9A-220ENST00000475339 WFDC3Q8IUB2 231 aa10.44□□□□□ -0.74
ATG9A-220ENST00000475339 LRTM2Q8N967 370 aa10.44□□□□□ -0.74
ATG9A-220ENST00000475339 SLC24A4Q8NFF2 622 aa10.44□□□□□ -0.74
ATG9A-220ENST00000475339 GGTLC1Q9BX51 225 aa10.44□□□□□ -0.74
ATG9A-220ENST00000475339 C20orf85Q9H1P6 137 aa10.44□□□□□ -0.74
ATG9A-220ENST00000475339 TMED3Q9Y3Q3 217 aa10.44□□□□□ -0.74
ATG9A-220ENST00000475339 C9orf170A2RU37 121 aa10.43□□□□□ -0.74
ATG9A-220ENST00000475339 I3L2K1 104 aa10.43□□□□□ -0.74
ATG9A-220ENST00000475339 RTL8CO15255 209 aa10.43□□□□□ -0.74
ATG9A-220ENST00000475339 PLA2G10O15496 165 aa10.43□□□□□ -0.74
ATG9A-220ENST00000475339 GNG7O60262 68 aa10.43□□□□□ -0.74
ATG9A-220ENST00000475339 SCGB2A1O75556 95 aa10.43□□□□□ -0.74
ATG9A-220ENST00000475339 IGHV3-48P01763 117 aa10.43□□□□□ -0.74
ATG9A-220ENST00000475339 HOXB5P09067 269 aa10.43□□□□□ -0.74
ATG9A-220ENST00000475339 OR4E1P0C645 316 aa10.43□□□□□ -0.74
ATG9A-220ENST00000475339 OPRK1P41145 380 aa10.43□□□□□ -0.74
ATG9A-220ENST00000475339 RELQ04864 619 aaPredicted RBP10.43□□□□□ -0.74
ATG9A-220ENST00000475339 DHRS2Q13268 280 aa10.43□□□□□ -0.74
ATG9A-220ENST00000475339 MZT2BQ6NZ67 158 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms