RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 CTLA4P16410 223 aa4.86□□□□□ -1.63
SMARCE1-208ENST00000474246 CD38P28907 300 aa4.86□□□□□ -1.63
SMARCE1-208ENST00000474246 PRSS3P35030 304 aa4.86□□□□□ -1.63
SMARCE1-208ENST00000474246 HLA-DRB3P79483 266 aa4.86□□□□□ -1.63
SMARCE1-208ENST00000474246 TMEM30BQ3MIR4 351 aa4.86□□□□□ -1.63
SMARCE1-208ENST00000474246 FAM153CQ494X1 144 aa4.86□□□□□ -1.63
SMARCE1-208ENST00000474246 ZNF324BQ6AW86 544 aaPredicted RBP4.86□□□□□ -1.63
SMARCE1-208ENST00000474246 XAF1Q6GPH4 301 aa4.86□□□□□ -1.63
SMARCE1-208ENST00000474246 CEACAM19Q7Z692 300 aa4.86□□□□□ -1.63
SMARCE1-208ENST00000474246 TMEM179BQ7Z7N9 219 aa4.86□□□□□ -1.63
SMARCE1-208ENST00000474246 TCEANCQ8N8B7 351 aa4.86□□□□□ -1.63
SMARCE1-208ENST00000474246 TWIST2Q8WVJ9 160 aa4.86□□□□□ -1.63
SMARCE1-208ENST00000474246 SLC25A44Q96H78 314 aaPredicted RBP4.86□□□□□ -1.63
SMARCE1-208ENST00000474246 C18orf12Q96KH6 178 aa4.86□□□□□ -1.63
SMARCE1-208ENST00000474246 SLC25A21Q9BQT8 299 aaPredicted RBP4.86□□□□□ -1.63
SMARCE1-208ENST00000474246 OR10A2Q9H208 303 aa4.86□□□□□ -1.63
SMARCE1-208ENST00000474246 DUSP21Q9H596 190 aa4.86□□□□□ -1.63
SMARCE1-208ENST00000474246 LINC00312Q9Y6C7 94 aa4.86□□□□□ -1.63
SMARCE1-208ENST00000474246 MEGF8Q7Z7M0 2845 aa4.86□□□□□ -1.63
SMARCE1-208ENST00000474246 IGHV2-26A0A0B4J1V2 119 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 LINC01619G3V211 115 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 H7C1H1 209 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 J3QT63 122 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 NTN1O95631 604 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 HRASP01112 189 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 OPRK1P41145 380 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 RIGQ13278 110 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 AMTNQ6UX39 209 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 SCGB1D4Q6XE38 83 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 SSX8Q7RTT4 187 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 SAXO1Q8IYX7 474 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 C4orf45Q96LM5 186 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 SOSTQ9BQB4 213 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 THTPAQ9BU02 230 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 RPS10P5Q9NQ39 176 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 TMEM106BQ9NUM4 274 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 RPUSD1Q9UJJ7 312 aaKnown RBP4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 RNF114Q9Y508 228 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 TRAV4A0A0B4J268 109 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 PLAC8L1A1L4L8 177 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 C8orf87E5RJ46 101 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 ISLRO14498 428 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 HOXB7P09629 217 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 FKBP2P26885 142 aaKnown RBP4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 CFPP27918 469 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 DRD3P35462 400 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 HERVK_113P63121 156 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 PLGLB1Q02325 96 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 VMA21Q3ZAQ7 101 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 ARTNQ5T4W7 220 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 LINC00482Q8N8I6 264 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 DCAF4L2Q8NA75 395 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 OR10J6PQ8NGY7 276 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 POP5Q969H6 163 aaKnown RBP4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 IMMP2LQ96T52 175 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 NTMQ9P121 344 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 MTFP1Q9UDX5 166 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 PYGO1Q9Y3Y4 419 aa4.85□□□□□ -1.63
SMARCE1-208ENST00000474246 GABARAPH6UMI1 98 aa4.84□□□□□ -1.63
SMARCE1-208ENST00000474246 AGPAT2O15120 278 aa4.84□□□□□ -1.63
SMARCE1-208ENST00000474246 SLC37A4O43826 429 aa4.84□□□□□ -1.63
SMARCE1-208ENST00000474246 DEDDO75618 318 aa4.84□□□□□ -1.63
SMARCE1-208ENST00000474246 HLA-DQB1P01920 261 aa4.84□□□□□ -1.63
SMARCE1-208ENST00000474246 NFYAP23511 347 aaPredicted RBP4.84□□□□□ -1.63
SMARCE1-208ENST00000474246 PSMB8P28062 276 aa4.84□□□□□ -1.63
SMARCE1-208ENST00000474246 MTPNP58546 118 aa4.84□□□□□ -1.63
SMARCE1-208ENST00000474246 TMEM258P61165 79 aa4.84□□□□□ -1.63
SMARCE1-208ENST00000474246 SEC61A1P61619 476 aaKnown RBP4.84□□□□□ -1.63
SMARCE1-208ENST00000474246 DAD1P61803 113 aa4.84□□□□□ -1.63
SMARCE1-208ENST00000474246 RPS18P62269 152 aaKnown RBP4.84□□□□□ -1.63
SMARCE1-208ENST00000474246 GFI1BQ5VTD9 330 aa4.84□□□□□ -1.63
SMARCE1-208ENST00000474246 Q6ZN92 141 aa4.84□□□□□ -1.63
SMARCE1-208ENST00000474246 KRTAP19-1Q8IUB9 90 aa4.84□□□□□ -1.63
SMARCE1-208ENST00000474246 OR4A5Q8NH83 315 aa4.84□□□□□ -1.63
SMARCE1-208ENST00000474246 PHLDA1Q8WV24 401 aaPredicted RBP4.84□□□□□ -1.63
SMARCE1-208ENST00000474246 FAM19A4Q96LR4 140 aa4.84□□□□□ -1.63
SMARCE1-208ENST00000474246 RTL8AQ9BWD3 113 aa4.84□□□□□ -1.63
SMARCE1-208ENST00000474246 Q9HAA7 133 aa4.84□□□□□ -1.63
SMARCE1-208ENST00000474246 PLIN4Q96Q06 1357 aa4.84□□□□□ -1.63
SMARCE1-208ENST00000474246 LAMA1P25391 3075 aa4.84□□□□□ -1.64
SMARCE1-208ENST00000474246 TRBV19A0A075B6N1 114 aa4.84□□□□□ -1.64
SMARCE1-208ENST00000474246 FAM236AA0A1B0GUQ0 79 aa4.84□□□□□ -1.64
SMARCE1-208ENST00000474246 FAM236BA0A1B0GV22 79 aa4.84□□□□□ -1.64
SMARCE1-208ENST00000474246 A0A1B0GXF2 115 aa4.84□□□□□ -1.64
SMARCE1-208ENST00000474246 OR2T8A6NH00 312 aa4.84□□□□□ -1.64
SMARCE1-208ENST00000474246 PIRO00625 290 aa4.84□□□□□ -1.64
SMARCE1-208ENST00000474246 CYB5AP00167 134 aa4.84□□□□□ -1.64
SMARCE1-208ENST00000474246 PTHP01270 115 aa4.84□□□□□ -1.64
SMARCE1-208ENST00000474246 EIF4EP06730 217 aaKnown RBP4.84□□□□□ -1.64
SMARCE1-208ENST00000474246 MED14OSP0DP75 135 aa4.84□□□□□ -1.64
SMARCE1-208ENST00000474246 CCL1P22362 96 aa4.84□□□□□ -1.64
SMARCE1-208ENST00000474246 CD52P31358 61 aa4.84□□□□□ -1.64
SMARCE1-208ENST00000474246 ZNF85Q03923 595 aa4.84□□□□□ -1.64
SMARCE1-208ENST00000474246 DIAPH2-AS1Q14236 149 aa4.84□□□□□ -1.64
SMARCE1-208ENST00000474246 RNASE12Q5GAN4 147 aaKnown RBP4.84□□□□□ -1.64
SMARCE1-208ENST00000474246 TRNP1Q6NT89 227 aa4.84□□□□□ -1.64
SMARCE1-208ENST00000474246 MORN3Q6PF18 240 aaPredicted RBP4.84□□□□□ -1.64
SMARCE1-208ENST00000474246 OR4K13Q8NH42 304 aa4.84□□□□□ -1.64
SMARCE1-208ENST00000474246 NEUROG1Q92886 237 aa4.84□□□□□ -1.64
SMARCE1-208ENST00000474246 ZNF501Q96CX3 271 aaPredicted RBP4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms