RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 CYSRT1A8MQ03 144 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 SHISA9B4DS77 424 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 PRSS46E5RG02 174 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 E7EQL1 145 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 CCL21O00585 134 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 ENSAO43768 121 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 COX7A2P2O60397 106 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 OR7C2O60412 319 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 SCGB2A1O75556 95 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 IGHV2-5P01817 119 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 ELANEP08246 267 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 EGR2P11161 476 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 CCL3L1P16619 93 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 CEACAM3P40198 252 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 CA7P43166 264 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 CDX1P47902 265 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 COMPP49747 757 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 PPOXP50336 477 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 LINC00205P59089 165 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 FBXL19-AS1Q494R0 122 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 TMEM155Q4W5P6 130 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 DUX4L9Q6RFH8 374 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 S100A7AQ86SG5 101 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 MMD2Q8IY49 270 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 INTS1Q8N201 2190 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 MUC15Q8N387 334 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 TEX45Q8NA69 505 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 ST6GALNAC3Q8NDV1 305 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 STXBP6Q8NFX7 210 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 OR4P4Q8NGL7 312 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 ZNF596Q8TC21 504 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 GATAD1Q8WUU5 269 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 TMEM190Q8WZ59 177 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 NEUROG1Q92886 237 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 ACY3Q96HD9 319 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 CLEC7AQ9BXN2 247 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 TMEM133Q9H2Q1 129 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 ZNF430Q9H8G1 570 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 GAR1Q9NY12 217 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 PITPNC1Q9UKF7 332 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 LY96Q9Y6Y9 160 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 ZNF462Q96JM2 2506 aa4.76□□□□□ -1.65
ATPAF1-204ENST00000474020 TEP1Q99973 2627 aaKnown RBP4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 A0A1W2PPQ1 181 aa4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 C9JCJ5 164 aa4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 YIF1AO95070 293 aa4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 NDUFB4O95168 129 aa4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 TRGC2P03986 189 aa4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 IGKV1-16P04430 117 aa4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 CXCL1P09341 107 aa4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 IGHV1-8P0DP01 117 aa4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 RNASE2P10153 161 aaKnown RBP4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 AREGP15514 252 aa4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 IGFBP2P18065 325 aa4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 OR10J1P30954 320 aa4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 ZNF137PP52743 207 aa4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 PSG5Q15238 335 aa4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 TIGITQ495A1 244 aa4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 COX19Q49B96 90 aa4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 FAM78BQ5VT40 261 aa4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 ZNF343Q6P1L6 599 aa4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 MOB3BQ86TA1 216 aa4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 NECAP1Q8NC96 275 aa4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 OR5T1Q8NG75 326 aa4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 OR10G8Q8NGN5 311 aa4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 ABHD5Q8WTS1 349 aa4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 RPEQ96AT9 228 aa4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 RNF5Q99942 180 aa4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 NABP2Q9BQ15 211 aa4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 NDUFA4L2Q9NRX3 87 aa4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 DSPP15924 2871 aaKnown RBP4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 SMG1Q96Q15 3661 aaKnown RBP4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 CHD3Q12873 2000 aaKnown RBP4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 KIAA2026Q5HYC2 2103 aa4.75□□□□□ -1.65
ATPAF1-204ENST00000474020 LOC400499M0QZD8 3231 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 PPIAL4CA0A0B4J2A2 164 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 GGCTO75223 188 aaKnown RBP4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 MMP23AO75900 390 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 TYMSP04818 313 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 LIPFP07098 398 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 OR5G3P0C626 314 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 LINC00869P0C866 280 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 TRGC1P0CF51 173 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 C8orf88P0DMB2 117 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 PPIAL4GP0DN37 164 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 GCSHP23434 173 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 LOXP28300 417 aaPredicted RBP4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 S100A7P31151 101 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 RPL27AP46776 148 aaKnown RBP4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 ATP5G3P48201 142 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 REG1BP48304 166 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 GNG4P50150 75 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 CNN1P51911 297 aaKnown RBP4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 GNB1P62873 340 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 UBE2L3P68036 154 aaKnown RBP4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 ZNF90Q03938 601 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 FOXI1Q12951 378 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 PLGLAQ15195 96 aa4.74□□□□□ -1.65
ATPAF1-204ENST00000474020 TNXAQ16473 311 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms