RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 COL25A1Q9BXS0 654 aaPredicted RBP11.34□□□□□ -0.59
BRAT1-203ENST00000467558 PVRIGQ6DKI7 326 aa11.34□□□□□ -0.59
BRAT1-203ENST00000467558 DGAT2L7PQ6IED9 249 aa11.34□□□□□ -0.59
BRAT1-203ENST00000467558 ZNF383Q8NA42 475 aa11.34□□□□□ -0.59
BRAT1-203ENST00000467558 OR1P1Q8NH06 330 aa11.34□□□□□ -0.59
BRAT1-203ENST00000467558 CACNA1AO00555 2505 aa11.34□□□□□ -0.59
BRAT1-203ENST00000467558 EFNB3Q15768 340 aa11.34□□□□□ -0.59
BRAT1-203ENST00000467558 C10orf55Q5SWW7 151 aa11.34□□□□□ -0.59
BRAT1-203ENST00000467558 GSX1Q9H4S2 264 aaPredicted RBP11.34□□□□□ -0.59
BRAT1-203ENST00000467558 LAMA3Q16787 3333 aa11.34□□□□□ -0.59
BRAT1-203ENST00000467558 IGHV1-3A0A0C4DH29 117 aa11.34□□□□□ -0.59
BRAT1-203ENST00000467558 CFHR2P36980 270 aa11.34□□□□□ -0.59
BRAT1-203ENST00000467558 CCL20P78556 96 aa11.34□□□□□ -0.59
BRAT1-203ENST00000467558 SMUG1Q53HV7 270 aa11.34□□□□□ -0.59
BRAT1-203ENST00000467558 WDR86Q86TI4 376 aa11.34□□□□□ -0.59
BRAT1-203ENST00000467558 ELOVL1Q9BW60 279 aa11.34□□□□□ -0.59
BRAT1-203ENST00000467558 TUBA4BQ9H853 241 aa11.34□□□□□ -0.59
BRAT1-203ENST00000467558 TRAV34A0A0B4J273 112 aa11.33□□□□□ -0.6
BRAT1-203ENST00000467558 SRSF3P84103 164 aaKnown RBP11.33□□□□□ -0.6
BRAT1-203ENST00000467558 RELBQ01201 579 aa11.33□□□□□ -0.6
BRAT1-203ENST00000467558 Q8TCH9 128 aa11.33□□□□□ -0.6
BRAT1-203ENST00000467558 TRAV1-1A0A0B4J248 108 aa11.33□□□□□ -0.6
BRAT1-203ENST00000467558 TRGC1P0CF51 173 aa11.33□□□□□ -0.6
BRAT1-203ENST00000467558 DSCR9P59020 149 aa11.33□□□□□ -0.6
BRAT1-203ENST00000467558 MINOS1Q5TGZ0 78 aa11.33□□□□□ -0.6
BRAT1-203ENST00000467558 GGTLC1Q9BX51 225 aa11.33□□□□□ -0.6
BRAT1-203ENST00000467558 MINOS1-NBL1R4GNA1 71 aa11.33□□□□□ -0.6
BRAT1-203ENST00000467558 COL4A3Q01955 1670 aa11.33□□□□□ -0.6
BRAT1-203ENST00000467558 A0A1W2PRE2 83 aa11.33□□□□□ -0.6
BRAT1-203ENST00000467558 M0R1W7 72 aa11.33□□□□□ -0.6
BRAT1-203ENST00000467558 CD99P14209 185 aa11.33□□□□□ -0.6
BRAT1-203ENST00000467558 COL8A2P25067 703 aa11.33□□□□□ -0.6
BRAT1-203ENST00000467558 CKS2P33552 79 aa11.33□□□□□ -0.6
BRAT1-203ENST00000467558 CX3CL1P78423 397 aa11.33□□□□□ -0.6
BRAT1-203ENST00000467558 LYPD2Q6UXB3 125 aa11.33□□□□□ -0.6
BRAT1-203ENST00000467558 Q6ZRM9 215 aa11.33□□□□□ -0.6
BRAT1-203ENST00000467558 NCOR1P1Q9H4R4 102 aa11.33□□□□□ -0.6
BRAT1-203ENST00000467558 TRAV20A0A0B4J274 112 aa11.32□□□□□ -0.6
BRAT1-203ENST00000467558 A0A0G2JRQ6 117 aa11.32□□□□□ -0.6
BRAT1-203ENST00000467558 H0YJW9 148 aa11.32□□□□□ -0.6
BRAT1-203ENST00000467558 ZNF585BQ52M93 769 aa11.32□□□□□ -0.6
BRAT1-203ENST00000467558 OR4B1Q8NGF8 309 aa11.32□□□□□ -0.6
BRAT1-203ENST00000467558 ABCA1O95477 2261 aa11.32□□□□□ -0.6
BRAT1-203ENST00000467558 IGLV3-9A0A075B6K5 115 aa11.32□□□□□ -0.6
BRAT1-203ENST00000467558 TMEM8BA6NDV4 472 aa11.32□□□□□ -0.6
BRAT1-203ENST00000467558 HLA-DRB1P01911 266 aa11.32□□□□□ -0.6
BRAT1-203ENST00000467558 CD5P06127 495 aa11.32□□□□□ -0.6
BRAT1-203ENST00000467558 ANOS1P23352 680 aa11.32□□□□□ -0.6
BRAT1-203ENST00000467558 TMEM155Q4W5P6 130 aa11.32□□□□□ -0.6
BRAT1-203ENST00000467558 TPTE2P1Q5T6R2 138 aa11.32□□□□□ -0.6
BRAT1-203ENST00000467558 CLEC19AQ6UXS0 136 aa11.32□□□□□ -0.6
BRAT1-203ENST00000467558 TRAV3A0A0B4J244 114 aa11.32□□□□□ -0.6
BRAT1-203ENST00000467558 Q6ZN92 141 aa11.32□□□□□ -0.6
BRAT1-203ENST00000467558 RNF125Q96EQ8 232 aa11.32□□□□□ -0.6
BRAT1-203ENST00000467558 CRIM1Q9NZV1 1036 aa11.32□□□□□ -0.6
BRAT1-203ENST00000467558 MALRD1Q5VYJ5 2156 aa11.32□□□□□ -0.6
BRAT1-203ENST00000467558 IGHV3-49A0A0A0MS15 119 aa11.32□□□□□ -0.6
BRAT1-203ENST00000467558 CEACAM4O75871 244 aa11.32□□□□□ -0.6
BRAT1-203ENST00000467558 RPL23P62829 140 aaKnown RBP11.32□□□□□ -0.6
BRAT1-203ENST00000467558 FAM71F2Q6NXP2 309 aa11.32□□□□□ -0.6
BRAT1-203ENST00000467558 VSIRQ9H7M9 311 aa11.32□□□□□ -0.6
BRAT1-203ENST00000467558 IL36BQ9NZH7 164 aa11.32□□□□□ -0.6
BRAT1-203ENST00000467558 GPX1P07203 203 aa11.31□□□□□ -0.6
BRAT1-203ENST00000467558 SNRPD3P62318 126 aaKnown RBP11.31□□□□□ -0.6
BRAT1-203ENST00000467558 VN1R17PQ8TDU5 208 aa11.31□□□□□ -0.6
BRAT1-203ENST00000467558 RNF166Q96A37 237 aaPredicted RBP11.31□□□□□ -0.6
BRAT1-203ENST00000467558 HSPB9Q9BQS6 159 aa11.31□□□□□ -0.6
BRAT1-203ENST00000467558 GPR61Q9BZJ8 451 aa11.31□□□□□ -0.6
BRAT1-203ENST00000467558 CDX1P47902 265 aaPredicted RBP11.31□□□□□ -0.6
BRAT1-203ENST00000467558 LINC00205P59089 165 aa11.31□□□□□ -0.6
BRAT1-203ENST00000467558 GCSAMLQ5JQS6 135 aa11.31□□□□□ -0.6
BRAT1-203ENST00000467558 VMO1Q7Z5L0 202 aa11.31□□□□□ -0.6
BRAT1-203ENST00000467558 RPP25LQ8N5L8 163 aaKnown RBP11.31□□□□□ -0.6
BRAT1-203ENST00000467558 GPR82Q96P67 336 aa11.31□□□□□ -0.6
BRAT1-203ENST00000467558 DMRTA2Q96SC8 542 aa11.31□□□□□ -0.6
BRAT1-203ENST00000467558 PTPRSQ13332 1948 aa11.31□□□□□ -0.6
BRAT1-203ENST00000467558 A0A087X0M5 115 aa11.31□□□□□ -0.6
BRAT1-203ENST00000467558 A0A1B0GX30 115 aa11.31□□□□□ -0.6
BRAT1-203ENST00000467558 FOXI3A8MTJ6 420 aaPredicted RBP11.31□□□□□ -0.6
BRAT1-203ENST00000467558 DIRC3C9JPN6 131 aa11.31□□□□□ -0.6
BRAT1-203ENST00000467558 SMAD7O15105 426 aaKnown RBP11.31□□□□□ -0.6
BRAT1-203ENST00000467558 G0S2P27469 103 aa11.31□□□□□ -0.6
BRAT1-203ENST00000467558 SRIP30626 198 aa11.31□□□□□ -0.6
BRAT1-203ENST00000467558 MYOZ3Q8TDC0 251 aa11.31□□□□□ -0.6
BRAT1-203ENST00000467558 A0A1W2PNU3 283 aaPredicted RBP11.3□□□□□ -0.6
BRAT1-203ENST00000467558 WNT2P09544 360 aa11.3□□□□□ -0.6
BRAT1-203ENST00000467558 ZNF600Q6ZNG1 722 aa11.3□□□□□ -0.6
BRAT1-203ENST00000467558 Q8NFD4 153 aa11.3□□□□□ -0.6
BRAT1-203ENST00000467558 Q9H3A6 140 aa11.3□□□□□ -0.6
BRAT1-203ENST00000467558 PHLDA3Q9Y5J5 127 aa11.3□□□□□ -0.6
BRAT1-203ENST00000467558 PIEZO1Q92508 2521 aa11.3□□□□□ -0.6
BRAT1-203ENST00000467558 TRAV40A0A0B4J280 105 aa11.3□□□□□ -0.6
BRAT1-203ENST00000467558 BUB1B-PAK6H3BSN5 160 aa11.3□□□□□ -0.6
BRAT1-203ENST00000467558 ZNF207O43670 478 aaKnown RBP11.3□□□□□ -0.6
BRAT1-203ENST00000467558 TSPOP30536 169 aa11.3□□□□□ -0.6
BRAT1-203ENST00000467558 RHOGP84095 191 aa11.3□□□□□ -0.6
BRAT1-203ENST00000467558 KIAA1644Q3SXP7 199 aa11.3□□□□□ -0.6
BRAT1-203ENST00000467558 FMC1Q96HJ9 113 aa11.3□□□□□ -0.6
BRAT1-203ENST00000467558 SPG11Q96JI7 2443 aa11.3□□□□□ -0.6
BRAT1-203ENST00000467558 SLC17A3O00476 420 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 504.5 ms