RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 TMEM230Q96A57 120 aa7.06□□□□□ -1.28
HDAC3-203ENST00000467533 TMEM70Q9BUB7 260 aa7.06□□□□□ -1.28
HDAC3-203ENST00000467533 SLC35B3Q9H1N7 401 aa7.06□□□□□ -1.28
HDAC3-203ENST00000467533 ELF5Q9UKW6 265 aaPredicted RBP7.06□□□□□ -1.28
HDAC3-203ENST00000467533 A0A087WTM6 91 aa7.05□□□□□ -1.28
HDAC3-203ENST00000467533 UCHL1P09936 223 aa7.05□□□□□ -1.28
HDAC3-203ENST00000467533 RANBP1P43487 201 aa7.05□□□□□ -1.28
HDAC3-203ENST00000467533 NKX2-1P43699 371 aaPredicted RBP7.05□□□□□ -1.28
HDAC3-203ENST00000467533 DEFB1P60022 68 aa7.05□□□□□ -1.28
HDAC3-203ENST00000467533 MSMO1Q15800 293 aa7.05□□□□□ -1.28
HDAC3-203ENST00000467533 HES5Q5TA89 166 aa7.05□□□□□ -1.28
HDAC3-203ENST00000467533 AADACL3Q5VUY0 350 aa7.05□□□□□ -1.28
HDAC3-203ENST00000467533 ZBTB34Q8NCN2 500 aa7.05□□□□□ -1.28
HDAC3-203ENST00000467533 OR13F1Q8NGS4 319 aa7.05□□□□□ -1.28
HDAC3-203ENST00000467533 GLMPQ8WWB7 406 aa7.05□□□□□ -1.28
HDAC3-203ENST00000467533 NRN1Q9NPD7 142 aa7.05□□□□□ -1.28
HDAC3-203ENST00000467533 MRPS16Q9Y3D3 137 aaKnown RBP7.05□□□□□ -1.28
HDAC3-203ENST00000467533 M0QYG6 137 aa7.04□□□□□ -1.28
HDAC3-203ENST00000467533 TMEM50AO95807 157 aa7.04□□□□□ -1.28
HDAC3-203ENST00000467533 RASSF2P50749 326 aa7.04□□□□□ -1.28
HDAC3-203ENST00000467533 C16orf54Q6UWD8 224 aa7.04□□□□□ -1.28
HDAC3-203ENST00000467533 ZNF114Q8NC26 417 aa7.04□□□□□ -1.28
HDAC3-203ENST00000467533 ZNF555Q8NEP9 628 aa7.04□□□□□ -1.28
HDAC3-203ENST00000467533 PYDC1Q8WXC3 89 aa7.04□□□□□ -1.28
HDAC3-203ENST00000467533 FCGR1BQ92637 280 aa7.04□□□□□ -1.28
HDAC3-203ENST00000467533 GNPNAT1Q96EK6 184 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-203ENST00000467533 SLC5A7Q9GZV3 580 aa7.04□□□□□ -1.28
HDAC3-203ENST00000467533 SAV1Q9H4B6 383 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-203ENST00000467533 SEPSECSQ9HD40 501 aaKnown RBP7.04□□□□□ -1.28
HDAC3-203ENST00000467533 FKBP11Q9NYL4 201 aa7.04□□□□□ -1.28
HDAC3-203ENST00000467533 PRNDQ9UKY0 176 aa7.04□□□□□ -1.28
HDAC3-203ENST00000467533 SCGB2A1O75556 95 aa7.03□□□□□ -1.28
HDAC3-203ENST00000467533 KRASP01116 189 aa7.03□□□□□ -1.28
HDAC3-203ENST00000467533 OXTP01178 125 aa7.03□□□□□ -1.28
HDAC3-203ENST00000467533 HNRNPCP07910 306 aaKnown RBP eCLIP7.03□□□□□ -1.28
HDAC3-203ENST00000467533 G6PCP35575 357 aa7.03□□□□□ -1.28
HDAC3-203ENST00000467533 RORCP51449 518 aa7.03□□□□□ -1.28
HDAC3-203ENST00000467533 FXYD4P59646 89 aa7.03□□□□□ -1.28
HDAC3-203ENST00000467533 ARPC4P59998 168 aa7.03□□□□□ -1.28
HDAC3-203ENST00000467533 PSG9Q00887 426 aa7.03□□□□□ -1.28
HDAC3-203ENST00000467533 FCN2Q15485 313 aa7.03□□□□□ -1.28
HDAC3-203ENST00000467533 ESRGQ1W209 222 aa7.03□□□□□ -1.28
HDAC3-203ENST00000467533 LINC00528Q8N1L1 170 aa7.03□□□□□ -1.28
HDAC3-203ENST00000467533 PQLC1Q8N2U9 271 aa7.03□□□□□ -1.28
HDAC3-203ENST00000467533 BPIFB6Q8NFQ5 453 aa7.03□□□□□ -1.28
HDAC3-203ENST00000467533 TSPAN14Q8NG11 270 aa7.03□□□□□ -1.28
HDAC3-203ENST00000467533 NUDCD2Q8WVJ2 157 aa7.03□□□□□ -1.28
HDAC3-203ENST00000467533 LINC00052Q96N35 136 aa7.03□□□□□ -1.28
HDAC3-203ENST00000467533 ANXA10Q9UJ72 324 aa7.03□□□□□ -1.28
HDAC3-203ENST00000467533 METTL21EPA6NDL7 271 aa7.02□□□□□ -1.29
HDAC3-203ENST00000467533 CBY3A6NI87 242 aa7.02□□□□□ -1.29
HDAC3-203ENST00000467533 DBX1A6NMT0 343 aa7.02□□□□□ -1.29
HDAC3-203ENST00000467533 ZNF705GA8MUZ8 300 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-203ENST00000467533 PPYP01298 95 aa7.02□□□□□ -1.29
HDAC3-203ENST00000467533 FCGR2CP31995 323 aa7.02□□□□□ -1.29
HDAC3-203ENST00000467533 ARL6IP1Q15041 203 aa7.02□□□□□ -1.29
HDAC3-203ENST00000467533 SIGLEC15Q6ZMC9 328 aa7.02□□□□□ -1.29
HDAC3-203ENST00000467533 FOXI2Q6ZQN5 318 aa7.02□□□□□ -1.29
HDAC3-203ENST00000467533 C9orf16Q9BUW7 83 aa7.02□□□□□ -1.29
HDAC3-203ENST00000467533 SCPEP1Q9HB40 452 aa7.02□□□□□ -1.29
HDAC3-203ENST00000467533 TRAV26-1A0A087WT03 109 aa7.01□□□□□ -1.29
HDAC3-203ENST00000467533 IGLV5-52A0A0A0MRZ9 124 aa7.01□□□□□ -1.29
HDAC3-203ENST00000467533 A0A0J9YY99 117 aa7.01□□□□□ -1.29
HDAC3-203ENST00000467533 ARL6IP5O75915 188 aa7.01□□□□□ -1.29
HDAC3-203ENST00000467533 PRM2P04554 102 aa7.01□□□□□ -1.29
HDAC3-203ENST00000467533 RLN1P04808 185 aa7.01□□□□□ -1.29
HDAC3-203ENST00000467533 P0C879 139 aa7.01□□□□□ -1.29
HDAC3-203ENST00000467533 ERHP84090 104 aaKnown RBP7.01□□□□□ -1.29
HDAC3-203ENST00000467533 OR5I1Q13606 314 aa7.01□□□□□ -1.29
HDAC3-203ENST00000467533 CDNFQ49AH0 187 aa7.01□□□□□ -1.29
HDAC3-203ENST00000467533 HACD4Q5VWC8 232 aa7.01□□□□□ -1.29
HDAC3-203ENST00000467533 ZNF818PQ6ZRF7 136 aa7.01□□□□□ -1.29
HDAC3-203ENST00000467533 AHSA2Q719I0 299 aa7.01□□□□□ -1.29
HDAC3-203ENST00000467533 NFE4Q86UQ8 179 aa7.01□□□□□ -1.29
HDAC3-203ENST00000467533 TMEM17Q86X19 198 aa7.01□□□□□ -1.29
HDAC3-203ENST00000467533 NANOGP1Q8N7R0 232 aa7.01□□□□□ -1.29
HDAC3-203ENST00000467533 COQ8AQ8NI60 647 aa7.01□□□□□ -1.29
HDAC3-203ENST00000467533 LGALS14Q8TCE9 139 aa7.01□□□□□ -1.29
HDAC3-203ENST00000467533 RXFP4Q8TDU9 374 aa7.01□□□□□ -1.29
HDAC3-203ENST00000467533 TMEM203Q969S6 136 aa7.01□□□□□ -1.29
HDAC3-203ENST00000467533 RNF125Q96EQ8 232 aa7.01□□□□□ -1.29
HDAC3-203ENST00000467533 CLUHP3Q96NS8 147 aa7.01□□□□□ -1.29
HDAC3-203ENST00000467533 TSC22D3Q99576 134 aa7.01□□□□□ -1.29
HDAC3-203ENST00000467533 ATG5Q9H1Y0 275 aa7.01□□□□□ -1.29
HDAC3-203ENST00000467533 TNFRSF18Q9Y5U5 241 aa7.01□□□□□ -1.29
HDAC3-203ENST00000467533 U3KQE9 123 aa7.01□□□□□ -1.29
HDAC3-203ENST00000467533 V9GY05 133 aa7.01□□□□□ -1.29
HDAC3-203ENST00000467533 LRP1Q07954 4544 aaKnown RBP7.01□□□□□ -1.29
HDAC3-203ENST00000467533 CLN5O75503 358 aa7□□□□□ -1.29
HDAC3-203ENST00000467533 PTHLHP12272 177 aa7□□□□□ -1.29
HDAC3-203ENST00000467533 RAB6AP20340 208 aa7□□□□□ -1.29
HDAC3-203ENST00000467533 F2RP25116 425 aa7□□□□□ -1.29
HDAC3-203ENST00000467533 CALRP27797 417 aaKnown RBP7□□□□□ -1.29
HDAC3-203ENST00000467533 LPAR6P43657 344 aa7□□□□□ -1.29
HDAC3-203ENST00000467533 GNG2P59768 71 aa7□□□□□ -1.29
HDAC3-203ENST00000467533 PRCDQ00LT1 54 aa7□□□□□ -1.29
HDAC3-203ENST00000467533 ZNF79Q15937 498 aa7□□□□□ -1.29
HDAC3-203ENST00000467533 TIGITQ495A1 244 aa7□□□□□ -1.29
HDAC3-203ENST00000467533 FAM78BQ5VT40 261 aa7□□□□□ -1.29
HDAC3-203ENST00000467533 CADM3Q8N126 398 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms