RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 DUSP18Q8NEJ0 188 aa11.88□□□□□ -0.51
ACTB-206ENST00000443528 SLC24A4Q8NFF2 622 aa11.88□□□□□ -0.51
ACTB-206ENST00000443528 OR2K2Q8NGT1 345 aa11.88□□□□□ -0.51
ACTB-206ENST00000443528 DTD1Q8TEA8 209 aa11.88□□□□□ -0.51
ACTB-206ENST00000443528 WDR12Q9GZL7 423 aaKnown RBP11.88□□□□□ -0.51
ACTB-206ENST00000443528 HIPK2Q9H2X6 1198 aa11.88□□□□□ -0.51
ACTB-206ENST00000443528 PALMDQ9NP74 551 aa11.88□□□□□ -0.51
ACTB-206ENST00000443528 UFC1Q9Y3C8 167 aa11.88□□□□□ -0.51
ACTB-206ENST00000443528 NUPL2O15504 423 aaKnown RBP11.87□□□□□ -0.51
ACTB-206ENST00000443528 GNG7O60262 68 aa11.87□□□□□ -0.51
ACTB-206ENST00000443528 TMEM50AO95807 157 aa11.87□□□□□ -0.51
ACTB-206ENST00000443528 OPRK1P41145 380 aa11.87□□□□□ -0.51
ACTB-206ENST00000443528 NPBWR1P48145 328 aa11.87□□□□□ -0.51
ACTB-206ENST00000443528 IFITM3Q01628 133 aa11.87□□□□□ -0.51
ACTB-206ENST00000443528 DCTN2Q13561 401 aaKnown RBP11.87□□□□□ -0.51
ACTB-206ENST00000443528 C4orf46Q504U0 113 aa11.87□□□□□ -0.51
ACTB-206ENST00000443528 Q8N1Y9 231 aa11.87□□□□□ -0.51
ACTB-206ENST00000443528 OR52B4Q8NGK2 314 aa11.87□□□□□ -0.51
ACTB-206ENST00000443528 COQ8AQ8NI60 647 aa11.87□□□□□ -0.51
ACTB-206ENST00000443528 DYNLRB2Q8TF09 96 aa11.87□□□□□ -0.51
ACTB-206ENST00000443528 TECRQ9NZ01 308 aaKnown RBP11.87□□□□□ -0.51
ACTB-206ENST00000443528 MLXQ9UH92 298 aa11.87□□□□□ -0.51
ACTB-206ENST00000443528 SELENOKQ9Y6D0 94 aa11.87□□□□□ -0.51
ACTB-206ENST00000443528 SORL1Q92673 2214 aa11.86□□□□□ -0.51
ACTB-206ENST00000443528 TRAV6A0A075B6T7 132 aa11.86□□□□□ -0.51
ACTB-206ENST00000443528 IGHV3OR16-8A0A075B7F1 116 aa11.86□□□□□ -0.51
ACTB-206ENST00000443528 ZNF785A8K8V0 405 aa11.86□□□□□ -0.51
ACTB-206ENST00000443528 MPTX1A8MV57 137 aa11.86□□□□□ -0.51
ACTB-206ENST00000443528 UPK1BO75841 260 aa11.86□□□□□ -0.51
ACTB-206ENST00000443528 NPY1RP25929 384 aa11.86□□□□□ -0.51
ACTB-206ENST00000443528 RELQ04864 619 aaPredicted RBP11.86□□□□□ -0.51
ACTB-206ENST00000443528 ASAH1Q13510 395 aa11.86□□□□□ -0.51
ACTB-206ENST00000443528 OR4X1Q8NH49 305 aa11.86□□□□□ -0.51
ACTB-206ENST00000443528 RNASEH2CQ8TDP1 164 aaKnown RBP11.86□□□□□ -0.51
ACTB-206ENST00000443528 MARC2Q969Z3 335 aa11.86□□□□□ -0.51
ACTB-206ENST00000443528 B9D2Q9BPU9 175 aa11.86□□□□□ -0.51
ACTB-206ENST00000443528 NUDT15Q9NV35 164 aa11.86□□□□□ -0.51
ACTB-206ENST00000443528 MRPL27Q9P0M9 148 aaKnown RBP11.86□□□□□ -0.51
ACTB-206ENST00000443528 SMAD5-AS1Q9Y6J3 95 aa11.86□□□□□ -0.51
ACTB-206ENST00000443528 U3KQ87 197 aa11.86□□□□□ -0.51
ACTB-206ENST00000443528 FAM90A26D6RGX4 464 aa11.85□□□□□ -0.51
ACTB-206ENST00000443528 K7EMT4 169 aa11.85□□□□□ -0.51
ACTB-206ENST00000443528 IFNA10P01566 189 aa11.85□□□□□ -0.51
ACTB-206ENST00000443528 BTNL8Q6UX41 500 aa11.85□□□□□ -0.51
ACTB-206ENST00000443528 MITD1Q8WV92 249 aa11.85□□□□□ -0.51
ACTB-206ENST00000443528 C20orf24Q9BUV8 137 aa11.85□□□□□ -0.51
ACTB-206ENST00000443528 DAZ1Q9NQZ3 744 aaKnown RBP11.85□□□□□ -0.51
ACTB-206ENST00000443528 COL7A1Q02388 2944 aa11.85□□□□□ -0.51
ACTB-206ENST00000443528 FAM240BA0A1B0GVZ2 78 aa11.84□□□□□ -0.51
ACTB-206ENST00000443528 C15orf62A8K5M9 175 aa11.84□□□□□ -0.51
ACTB-206ENST00000443528 ZNF207O43670 478 aaKnown RBP11.84□□□□□ -0.51
ACTB-206ENST00000443528 CLN5O75503 358 aa11.84□□□□□ -0.51
ACTB-206ENST00000443528 IAPPP10997 89 aa11.84□□□□□ -0.51
ACTB-206ENST00000443528 MZT2BQ6NZ67 158 aa11.84□□□□□ -0.51
ACTB-206ENST00000443528 PRSS54Q6PEW0 395 aa11.84□□□□□ -0.51
ACTB-206ENST00000443528 NOXA1Q86UR1 476 aa11.84□□□□□ -0.51
ACTB-206ENST00000443528 TMEM61Q8N0U2 210 aa11.84□□□□□ -0.51
ACTB-206ENST00000443528 WDR89Q96FK6 387 aaPredicted RBP11.84□□□□□ -0.51
ACTB-206ENST00000443528 OR10C1Q96KK4 312 aa11.84□□□□□ -0.51
ACTB-206ENST00000443528 RPS10-NUDT3A0A1W2PQS6 291 aa11.83□□□□□ -0.52
ACTB-206ENST00000443528 YIF1AO95070 293 aa11.83□□□□□ -0.52
ACTB-206ENST00000443528 H2AFB2P0C5Z0 115 aa11.83□□□□□ -0.52
ACTB-206ENST00000443528 CD69Q07108 199 aa11.83□□□□□ -0.52
ACTB-206ENST00000443528 OR4D5Q8NGN0 318 aa11.83□□□□□ -0.52
ACTB-206ENST00000443528 SEC22CQ9BRL7 303 aa11.83□□□□□ -0.52
ACTB-206ENST00000443528 MAGT1Q9H0U3 335 aa11.83□□□□□ -0.52
ACTB-206ENST00000443528 DNAH9Q9NYC9 4486 aa11.83□□□□□ -0.52
ACTB-206ENST00000443528 SYNGR2O43760 224 aa11.82□□□□□ -0.52
ACTB-206ENST00000443528 MED6O75586 246 aa11.82□□□□□ -0.52
ACTB-206ENST00000443528 IFNA21P01568 189 aa11.82□□□□□ -0.52
ACTB-206ENST00000443528 IGKV1-17P01599 117 aa11.82□□□□□ -0.52
ACTB-206ENST00000443528 SLC25A4P12235 298 aa11.82□□□□□ -0.52
ACTB-206ENST00000443528 RND2P52198 227 aa11.82□□□□□ -0.52
ACTB-206ENST00000443528 ATP5IP56385 69 aaPredicted RBP11.82□□□□□ -0.52
ACTB-206ENST00000443528 ID3Q02535 119 aa11.82□□□□□ -0.52
ACTB-206ENST00000443528 TOMM20LQ6UXN7 152 aa11.82□□□□□ -0.52
ACTB-206ENST00000443528 ZNF600Q6ZNG1 722 aa11.82□□□□□ -0.52
ACTB-206ENST00000443528 TMEM116Q8NCL8 245 aa11.82□□□□□ -0.52
ACTB-206ENST00000443528 ZFAND3Q9H8U3 227 aa11.82□□□□□ -0.52
ACTB-206ENST00000443528 SMPXQ9UHP9 88 aa11.82□□□□□ -0.52
ACTB-206ENST00000443528 PUS1Q9Y606 427 aaKnown RBP eCLIP11.82□□□□□ -0.523e-13■□□□□ 8.3
ACTB-206ENST00000443528 WRBO00258 174 aa11.81□□□□□ -0.52
ACTB-206ENST00000443528 CD7P09564 240 aa11.81□□□□□ -0.52
ACTB-206ENST00000443528 IGLC1P0CG04 106 aa11.81□□□□□ -0.52
ACTB-206ENST00000443528 IGHV4-30-4P0DP06 118 aa11.81□□□□□ -0.52
ACTB-206ENST00000443528 GUCA2BQ16661 112 aa11.81□□□□□ -0.52
ACTB-206ENST00000443528 TIGITQ495A1 244 aa11.81□□□□□ -0.52
ACTB-206ENST00000443528 ETFRF1Q6IPR1 90 aa11.81□□□□□ -0.52
ACTB-206ENST00000443528 ZNF431Q8TF32 576 aaPredicted RBP11.81□□□□□ -0.52
ACTB-206ENST00000443528 NPIPB3Q92617 1050 aa11.81□□□□□ -0.52
ACTB-206ENST00000443528 TRAV30A0A087WSZ9 112 aa11.8□□□□□ -0.52
ACTB-206ENST00000443528 IGHV7-4-1A0A0J9YVY3 117 aa11.8□□□□□ -0.52
ACTB-206ENST00000443528 SCAF4O95104 1147 aaKnown RBP11.8□□□□□ -0.52
ACTB-206ENST00000443528 IFNA4P05014 189 aa11.8□□□□□ -0.52
ACTB-206ENST00000443528 FRMD6-AS1P0C7T7 363 aa11.8□□□□□ -0.52
ACTB-206ENST00000443528 POLR2GP62487 172 aaKnown RBP eCLIP11.8□□□□□ -0.52
ACTB-206ENST00000443528 SLC16A13Q7RTY0 426 aa11.8□□□□□ -0.52
ACTB-206ENST00000443528 GTSCR1Q86UQ5 136 aa11.8□□□□□ -0.52
ACTB-206ENST00000443528 CIB3Q96Q77 187 aaPredicted RBP11.8□□□□□ -0.52
ACTB-206ENST00000443528 C19orf73Q9NVV2 129 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms