RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 KIR2DL4Q99706 377 aa8.61□□□□□ -1.03
LIN54-202ENST00000442461 PIMREGQ9BSJ6 248 aa8.61□□□□□ -1.03
LIN54-202ENST00000442461 PNRC2Q9NPJ4 139 aaKnown RBP8.61□□□□□ -1.03
LIN54-202ENST00000442461 PROCRQ9UNN8 238 aa8.61□□□□□ -1.03
LIN54-202ENST00000442461 SAA2-SAA4A0A096LPE2 208 aa8.61□□□□□ -1.03
LIN54-202ENST00000442461 CELA2BP08218 269 aaPredicted RBP8.61□□□□□ -1.03
LIN54-202ENST00000442461 SP9P0CG40 484 aa8.61□□□□□ -1.03
LIN54-202ENST00000442461 C1orf122Q6ZSJ8 110 aa8.61□□□□□ -1.03
LIN54-202ENST00000442461 PPP1R27Q86WC6 154 aa8.61□□□□□ -1.03
LIN54-202ENST00000442461 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.61□□□□□ -1.03
LIN54-202ENST00000442461 BADQ92934 168 aa8.61□□□□□ -1.03
LIN54-202ENST00000442461 AKAP6Q13023 2319 aa8.61□□□□□ -1.03
LIN54-202ENST00000442461 TRBV20-1A0A075B6N2 111 aa8.61□□□□□ -1.03
LIN54-202ENST00000442461 TRAV24A0A0B4J272 114 aa8.61□□□□□ -1.03
LIN54-202ENST00000442461 FCN3O75636 299 aa8.61□□□□□ -1.03
LIN54-202ENST00000442461 PRSS8Q16651 343 aa8.61□□□□□ -1.03
LIN54-202ENST00000442461 TIMD4Q96H15 378 aa8.61□□□□□ -1.03
LIN54-202ENST00000442461 RCHY1Q96PM5 261 aa8.61□□□□□ -1.03
LIN54-202ENST00000442461 PHF7Q9BWX1 381 aaPredicted RBP8.61□□□□□ -1.03
LIN54-202ENST00000442461 Q9H3A6 140 aa8.61□□□□□ -1.03
LIN54-202ENST00000442461 ANAPC10Q9UM13 185 aa8.61□□□□□ -1.03
LIN54-202ENST00000442461 WNK2Q9Y3S1 2297 aa8.6□□□□□ -1.03
LIN54-202ENST00000442461 IGHV1OR21-1A0A087WYE8 117 aa8.6□□□□□ -1.03
LIN54-202ENST00000442461 F2Z2F3 143 aa8.6□□□□□ -1.03
LIN54-202ENST00000442461 EVI2AP22794 236 aa8.6□□□□□ -1.03
LIN54-202ENST00000442461 VEGFBP49765 207 aa8.6□□□□□ -1.03
LIN54-202ENST00000442461 COL11A1P12107 1806 aaPredicted RBP8.6□□□□□ -1.03
LIN54-202ENST00000442461 PDCD11Q14690 1871 aaKnown RBP8.6□□□□□ -1.03
LIN54-202ENST00000442461 LRRK1Q38SD2 2015 aa8.6□□□□□ -1.03
LIN54-202ENST00000442461 PYYP10082 97 aa8.6□□□□□ -1.03
LIN54-202ENST00000442461 HERV-K104P63124 156 aa8.6□□□□□ -1.03
LIN54-202ENST00000442461 SRSF7Q16629 238 aaKnown RBP eCLIP8.6□□□□□ -1.03
LIN54-202ENST00000442461 SPATA31B1PQ5VZV4 182 aa8.6□□□□□ -1.03
LIN54-202ENST00000442461 PLA2G2EQ9NZK7 142 aa8.6□□□□□ -1.03
LIN54-202ENST00000442461 AHDC1Q5TGY3 1603 aaPredicted RBP8.6□□□□□ -1.03
LIN54-202ENST00000442461 C9JAW5 83 aa8.6□□□□□ -1.03
LIN54-202ENST00000442461 LYZL6O75951 148 aa8.6□□□□□ -1.03
LIN54-202ENST00000442461 CCL3P10147 92 aa8.6□□□□□ -1.03
LIN54-202ENST00000442461 REG1BP48304 166 aa8.6□□□□□ -1.03
LIN54-202ENST00000442461 PRR31Q5SQ13 230 aa8.6□□□□□ -1.03
LIN54-202ENST00000442461 CDCP2Q5VXM1 449 aa8.6□□□□□ -1.03
LIN54-202ENST00000442461 PHLDA3Q9Y5J5 127 aa8.6□□□□□ -1.03
LIN54-202ENST00000442461 ZNF236Q9UL36 1845 aa8.6□□□□□ -1.03
LIN54-202ENST00000442461 LINC00271P0C7V0 271 aa8.6□□□□□ -1.03
LIN54-202ENST00000442461 TNFAIP6P98066 277 aaPredicted RBP8.6□□□□□ -1.03
LIN54-202ENST00000442461 C2orf82Q6UX34 121 aa8.6□□□□□ -1.03
LIN54-202ENST00000442461 ZNF501Q96CX3 271 aaPredicted RBP8.6□□□□□ -1.03
LIN54-202ENST00000442461 LYZL4Q96KX0 146 aa8.6□□□□□ -1.03
LIN54-202ENST00000442461 ANXA2RQ3ZCQ2 193 aa8.59□□□□□ -1.03
LIN54-202ENST00000442461 CALYQ9NYX4 217 aa8.59□□□□□ -1.03
LIN54-202ENST00000442461 A0A0G2JRQ6 117 aa8.59□□□□□ -1.03
LIN54-202ENST00000442461 SIVA1O15304 175 aa8.59□□□□□ -1.03
LIN54-202ENST00000442461 PPP1R17O96001 155 aa8.59□□□□□ -1.03
LIN54-202ENST00000442461 ZNF826PQ6ZT77 177 aa8.59□□□□□ -1.03
LIN54-202ENST00000442461 C5orf24Q7Z6I8 188 aa8.59□□□□□ -1.03
LIN54-202ENST00000442461 SPACA3Q8IXA5 215 aa8.59□□□□□ -1.03
LIN54-202ENST00000442461 ZNF114Q8NC26 417 aa8.59□□□□□ -1.03
LIN54-202ENST00000442461 SARAFQ96BY9 339 aa8.59□□□□□ -1.03
LIN54-202ENST00000442461 DUSP15Q9H1R2 295 aaPredicted RBP8.59□□□□□ -1.03
LIN54-202ENST00000442461 LIME1Q9H400 295 aa8.59□□□□□ -1.03
LIN54-202ENST00000442461 ATG2BQ96BY7 2078 aa8.59□□□□□ -1.03
LIN54-202ENST00000442461 D6R8Y8 96 aa8.59□□□□□ -1.03
LIN54-202ENST00000442461 ATXN8Q156A1 80 aa8.59□□□□□ -1.03
LIN54-202ENST00000442461 FAM53AQ6NSI3 398 aaPredicted RBP8.59□□□□□ -1.03
LIN54-202ENST00000442461 AMTNQ6UX39 209 aa8.59□□□□□ -1.03
LIN54-202ENST00000442461 ZNF562Q6V9R5 426 aa8.59□□□□□ -1.03
LIN54-202ENST00000442461 Q6ZRM9 215 aa8.59□□□□□ -1.03
LIN54-202ENST00000442461 RNF144BQ7Z419 303 aa8.59□□□□□ -1.03
LIN54-202ENST00000442461 ABHD17AQ96GS6 310 aa8.59□□□□□ -1.03
LIN54-202ENST00000442461 SPANXDQ9BXN6 97 aa8.59□□□□□ -1.03
LIN54-202ENST00000442461 V9GYV3 84 aa8.59□□□□□ -1.03
LIN54-202ENST00000442461 IGKV3-11P04433 115 aa8.58□□□□□ -1.04
LIN54-202ENST00000442461 PAX9P55771 341 aa8.58□□□□□ -1.04
LIN54-202ENST00000442461 CLUHP3Q96NS8 147 aa8.58□□□□□ -1.04
LIN54-202ENST00000442461 JMJD8Q96S16 334 aa8.58□□□□□ -1.04
LIN54-202ENST00000442461 OTORQ9NRC9 128 aa8.58□□□□□ -1.04
LIN54-202ENST00000442461 FANCMQ8IYD8 2048 aa8.58□□□□□ -1.04
LIN54-202ENST00000442461 SRSF1Q07955 248 aaKnown RBP eCLIP8.58□□□□□ -1.04
LIN54-202ENST00000442461 ZNF56Q15929 161 aa8.58□□□□□ -1.04
LIN54-202ENST00000442461 SH2D6Q7Z4S9 175 aa8.58□□□□□ -1.04
LIN54-202ENST00000442461 MDP1Q86V88 176 aa8.58□□□□□ -1.04
LIN54-202ENST00000442461 ZNF441Q8N8Z8 693 aa8.58□□□□□ -1.04
LIN54-202ENST00000442461 TMEM54Q969K7 222 aa8.58□□□□□ -1.04
LIN54-202ENST00000442461 TMEM74BQ9NUR3 256 aa8.58□□□□□ -1.04
LIN54-202ENST00000442461 LOC102723996A0A087X1L8 192 aa8.58□□□□□ -1.04
LIN54-202ENST00000442461 IGKV1-12A0A0C4DH73 117 aa8.58□□□□□ -1.04
LIN54-202ENST00000442461 C22orf46C9J442 243 aa8.58□□□□□ -1.04
LIN54-202ENST00000442461 SYNGR3O43761 229 aa8.58□□□□□ -1.04
LIN54-202ENST00000442461 IGKV1D-12P01611 117 aa8.58□□□□□ -1.04
LIN54-202ENST00000442461 ZNF688P0C7X2 276 aa8.58□□□□□ -1.04
LIN54-202ENST00000442461 RPL39P5Q59GN2 51 aa8.58□□□□□ -1.04
LIN54-202ENST00000442461 OR10J6PQ8NGY7 276 aa8.58□□□□□ -1.04
LIN54-202ENST00000442461 RNF7Q9UBF6 113 aa8.58□□□□□ -1.04
LIN54-202ENST00000442461 SDK2Q58EX2 2172 aa8.58□□□□□ -1.04
LIN54-202ENST00000442461 TRGV5A0A0B4J1U4 118 aa8.57□□□□□ -1.04
LIN54-202ENST00000442461 IGHV1-24A0A0C4DH33 117 aa8.57□□□□□ -1.04
LIN54-202ENST00000442461 F2RL2O00254 374 aa8.57□□□□□ -1.04
LIN54-202ENST00000442461 CXCL10P02778 98 aa8.57□□□□□ -1.04
LIN54-202ENST00000442461 RHOGP84095 191 aa8.57□□□□□ -1.04
LIN54-202ENST00000442461 VWC2Q2TAL6 325 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms