RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 IGHV3-48P01763 117 aa16.42■□□□□ 0.22
VPS13B-204ENST00000441350 TRGV3P03979 118 aa16.42■□□□□ 0.22
VPS13B-204ENST00000441350 RPL7L1Q6DKI1 246 aaKnown RBP16.42■□□□□ 0.22
VPS13B-204ENST00000441350 CENPVQ7Z7K6 275 aaPredicted RBP16.42■□□□□ 0.22
VPS13B-204ENST00000441350 WIPF2Q8TF74 440 aaPredicted RBP16.42■□□□□ 0.22
VPS13B-204ENST00000441350 FAM223BA6NKX1 122 aa16.41■□□□□ 0.22
VPS13B-204ENST00000441350 PF4V1P10720 104 aa16.41■□□□□ 0.22
VPS13B-204ENST00000441350 MDKP21741 143 aaPredicted RBP16.41■□□□□ 0.22
VPS13B-204ENST00000441350 DEFA5Q01523 94 aa16.41■□□□□ 0.22
VPS13B-204ENST00000441350 FOXE3Q13461 319 aa16.41■□□□□ 0.22
VPS13B-204ENST00000441350 ZNF266Q14584 549 aa16.41■□□□□ 0.22
VPS13B-204ENST00000441350 C15orf32Q32M92 178 aa16.41■□□□□ 0.22
VPS13B-204ENST00000441350 TEX38Q6PEX7 206 aa16.41■□□□□ 0.22
VPS13B-204ENST00000441350 FAM223AQ8IWN6 122 aa16.41■□□□□ 0.22
VPS13B-204ENST00000441350 OR4F5Q8NH21 305 aa16.41■□□□□ 0.22
VPS13B-204ENST00000441350 VN1R17PQ8TDU5 208 aa16.41■□□□□ 0.22
VPS13B-204ENST00000441350 MFSD2BA6NFX1 497 aa16.41■□□□□ 0.22
VPS13B-204ENST00000441350 RAB9AP51151 201 aa16.41■□□□□ 0.22
VPS13B-204ENST00000441350 TPPP2P59282 170 aa16.41■□□□□ 0.22
VPS13B-204ENST00000441350 RNF152Q8N8N0 203 aa16.41■□□□□ 0.22
VPS13B-204ENST00000441350 UBAC2Q8NBM4 344 aa16.41■□□□□ 0.22
VPS13B-204ENST00000441350 TMEM116Q8NCL8 245 aa16.41■□□□□ 0.22
VPS13B-204ENST00000441350 SLC35E1Q96K37 410 aa16.41■□□□□ 0.22
VPS13B-204ENST00000441350 NPVFQ9HCQ7 196 aa16.41■□□□□ 0.22
VPS13B-204ENST00000441350 UBE2L5PA0A1B0GUS4 154 aa16.4■□□□□ 0.22
VPS13B-204ENST00000441350 JTBO76095 146 aa16.4■□□□□ 0.22
VPS13B-204ENST00000441350 ELANEP08246 267 aa16.4■□□□□ 0.22
VPS13B-204ENST00000441350 TREML4Q6UXN2 200 aa16.4■□□□□ 0.22
VPS13B-204ENST00000441350 TMEM144Q7Z5S9 345 aa16.4■□□□□ 0.22
VPS13B-204ENST00000441350 COMMD1Q8N668 190 aa16.4■□□□□ 0.22
VPS13B-204ENST00000441350 KLHDC1Q8N7A1 406 aa16.4■□□□□ 0.22
VPS13B-204ENST00000441350 ZNF471Q9BX82 626 aaPredicted RBP16.4■□□□□ 0.22
VPS13B-204ENST00000441350 PARD6GQ9BYG4 376 aaPredicted RBP16.4■□□□□ 0.22
VPS13B-204ENST00000441350 WDR83OSQ9Y284 106 aa16.4■□□□□ 0.22
VPS13B-204ENST00000441350 BORCS7-ASMTA0A0B4J1R7 106 aa16.39■□□□□ 0.21
VPS13B-204ENST00000441350 SMCO3A2RU48 225 aa16.39■□□□□ 0.21
VPS13B-204ENST00000441350 LCNL1Q6ZST4 164 aa16.39■□□□□ 0.21
VPS13B-204ENST00000441350 OR4X1Q8NH49 305 aa16.39■□□□□ 0.21
VPS13B-204ENST00000441350 NPIPB3Q92617 1050 aa16.39■□□□□ 0.21
VPS13B-204ENST00000441350 ACY3Q96HD9 319 aa16.39■□□□□ 0.21
VPS13B-204ENST00000441350 USMG5Q96IX5 58 aa16.39■□□□□ 0.21
VPS13B-204ENST00000441350 CXorf58Q96LI9 332 aa16.39■□□□□ 0.21
VPS13B-204ENST00000441350 LSM4Q9Y4Z0 139 aaKnown RBP16.39■□□□□ 0.21
VPS13B-204ENST00000441350 IFNA5P01569 189 aa16.38■□□□□ 0.21
VPS13B-204ENST00000441350 RND2P52198 227 aa16.38■□□□□ 0.21
VPS13B-204ENST00000441350 AKR1C1Q04828 323 aa16.38■□□□□ 0.21
VPS13B-204ENST00000441350 ATP5G2Q06055 141 aa16.38■□□□□ 0.21
VPS13B-204ENST00000441350 KIAA0141Q14154 515 aaPredicted RBP16.38■□□□□ 0.21
VPS13B-204ENST00000441350 ACSM6Q6P461 480 aa16.38■□□□□ 0.21
VPS13B-204ENST00000441350 SLC51BQ86UW2 128 aa16.38■□□□□ 0.21
VPS13B-204ENST00000441350 OR5AU1Q8NGC0 362 aa16.38■□□□□ 0.21
VPS13B-204ENST00000441350 MYOZ3Q8TDC0 251 aa16.38■□□□□ 0.21
VPS13B-204ENST00000441350 WDR61Q9GZS3 305 aaKnown RBP16.38■□□□□ 0.21
VPS13B-204ENST00000441350 ARV1Q9H2C2 271 aa16.38■□□□□ 0.21
VPS13B-204ENST00000441350 C21orf62Q9NYP8 219 aa16.38■□□□□ 0.21
VPS13B-204ENST00000441350 S4R3C0 116 aa16.38■□□□□ 0.21
VPS13B-204ENST00000441350 IGKV1OR2-108A0A075B7D4 117 aa16.37■□□□□ 0.21
VPS13B-204ENST00000441350 CLPSL1A2RUU4 121 aa16.37■□□□□ 0.21
VPS13B-204ENST00000441350 F8W735 103 aaPredicted RBP16.37■□□□□ 0.21
VPS13B-204ENST00000441350 FCGR2BP31994 310 aaPredicted RBP16.37■□□□□ 0.21
VPS13B-204ENST00000441350 MFAP4P55083 255 aa16.37■□□□□ 0.21
VPS13B-204ENST00000441350 STOML3Q8TAV4 291 aa16.37■□□□□ 0.21
VPS13B-204ENST00000441350 ZNF502Q8TBZ5 544 aa16.37■□□□□ 0.21
VPS13B-204ENST00000441350 TEPPQ6URK8 271 aa16.37■□□□□ 0.21
VPS13B-204ENST00000441350 THAP8Q8NA92 274 aa16.37■□□□□ 0.21
VPS13B-204ENST00000441350 RNF114Q9Y508 228 aa16.37■□□□□ 0.21
VPS13B-204ENST00000441350 SETD2Q9BYW2 2564 aaPredicted RBP16.36■□□□□ 0.21
VPS13B-204ENST00000441350 A0A0G2JLM5 398 aa16.36■□□□□ 0.21
VPS13B-204ENST00000441350 RPLP1P05386 114 aaKnown RBP16.36■□□□□ 0.21
VPS13B-204ENST00000441350 FGF7P21781 194 aa16.36■□□□□ 0.21
VPS13B-204ENST00000441350 PROK1P58294 105 aa16.36■□□□□ 0.21
VPS13B-204ENST00000441350 BTNL8Q6UX41 500 aa16.36■□□□□ 0.21
VPS13B-204ENST00000441350 SCGB1C1Q8TD33 95 aa16.36■□□□□ 0.21
VPS13B-204ENST00000441350 TXN2Q99757 166 aa16.36■□□□□ 0.21
VPS13B-204ENST00000441350 IGKV1D-37A0A075B6S9 117 aa16.35■□□□□ 0.21
VPS13B-204ENST00000441350 TRBV7-1A0A0A6YYK4 115 aa16.35■□□□□ 0.21
VPS13B-204ENST00000441350 MPDU1O75352 247 aa16.35■□□□□ 0.21
VPS13B-204ENST00000441350 CLN5O75503 358 aa16.35■□□□□ 0.21
VPS13B-204ENST00000441350 NPBWR1P48145 328 aa16.35■□□□□ 0.21
VPS13B-204ENST00000441350 TCTEX1D4Q5JR98 221 aa16.35■□□□□ 0.21
VPS13B-204ENST00000441350 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.35■□□□□ 0.21
VPS13B-204ENST00000441350 EEF1AKMT3Q96AZ1 226 aa16.35■□□□□ 0.21
VPS13B-204ENST00000441350 CCDC140Q96MF4 163 aa16.35■□□□□ 0.21
VPS13B-204ENST00000441350 GINS3Q9BRX5 216 aa16.35■□□□□ 0.21
VPS13B-204ENST00000441350 IGHV3-23P01764 117 aa16.34■□□□□ 0.21
VPS13B-204ENST00000441350 TPT1P13693 172 aaKnown RBP16.34■□□□□ 0.21
VPS13B-204ENST00000441350 EIF5AP63241 154 aaKnown RBP16.34■□□□□ 0.21
VPS13B-204ENST00000441350 ZNF491Q8N8L2 437 aa16.34■□□□□ 0.21
VPS13B-204ENST00000441350 HSD17B11Q8NBQ5 300 aa16.34■□□□□ 0.21
VPS13B-204ENST00000441350 ST8SIA2Q92186 375 aa16.34■□□□□ 0.21
VPS13B-204ENST00000441350 ATP6V0BQ99437 205 aa16.34■□□□□ 0.21
VPS13B-204ENST00000441350 MGST2Q99735 147 aa16.34■□□□□ 0.21
VPS13B-204ENST00000441350 IGLC1P0CG04 106 aa16.34■□□□□ 0.21
VPS13B-204ENST00000441350 RUNX1Q01196 453 aa16.34■□□□□ 0.21
VPS13B-204ENST00000441350 PRIMA1Q86XR5 153 aa16.34■□□□□ 0.21
VPS13B-204ENST00000441350 BAP18Q8IXM2 172 aa16.34■□□□□ 0.21
VPS13B-204ENST00000441350 OR4X2Q8NGF9 303 aa16.34■□□□□ 0.21
VPS13B-204ENST00000441350 NPCDR1Q9BY65 106 aa16.34■□□□□ 0.21
VPS13B-204ENST00000441350 A0A1B0GUS0 222 aa16.33■□□□□ 0.2
VPS13B-204ENST00000441350 ATP6V0CP27449 155 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 493.8 ms