RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 IGHV3-49A0A0A0MS15 119 aa13.13□□□□□ -0.31
NUP50-208ENST00000430547 CEBPZOSA8MTT3 80 aa13.13□□□□□ -0.31
NUP50-208ENST00000430547 ANXA3P12429 323 aa13.13□□□□□ -0.31
NUP50-208ENST00000430547 AKR1C4P17516 323 aa13.13□□□□□ -0.31
NUP50-208ENST00000430547 HTR2BP41595 481 aa13.13□□□□□ -0.31
NUP50-208ENST00000430547 ZNF600Q6ZNG1 722 aa13.13□□□□□ -0.31
NUP50-208ENST00000430547 TOMM5Q8N4H5 51 aa13.13□□□□□ -0.31
NUP50-208ENST00000430547 IL22RA2Q969J5 263 aa13.13□□□□□ -0.31
NUP50-208ENST00000430547 GALNT14Q96FL9 552 aa13.13□□□□□ -0.31
NUP50-208ENST00000430547 CACFD1Q9UGQ2 172 aa13.13□□□□□ -0.31
NUP50-208ENST00000430547 TMEM56-RWDD3S4R434 201 aa13.13□□□□□ -0.31
NUP50-208ENST00000430547 RPS10-NUDT3A0A1W2PQS6 291 aa13.12□□□□□ -0.31
NUP50-208ENST00000430547 CHEK1O14757 476 aa13.12□□□□□ -0.31
NUP50-208ENST00000430547 SULT1A3P0DMM9 295 aa13.12□□□□□ -0.31
NUP50-208ENST00000430547 SULT1A4P0DMN0 295 aa13.12□□□□□ -0.31
NUP50-208ENST00000430547 AARDQ4LEZ3 155 aa13.12□□□□□ -0.31
NUP50-208ENST00000430547 ZFAND6Q6FIF0 208 aa13.12□□□□□ -0.31
NUP50-208ENST00000430547 GPR146Q96CH1 333 aa13.12□□□□□ -0.31
NUP50-208ENST00000430547 RNF2Q99496 336 aa13.12□□□□□ -0.31
NUP50-208ENST00000430547 PIGBOS1A0A0B4J2F0 54 aa13.11□□□□□ -0.31
NUP50-208ENST00000430547 TMEM50AO95807 157 aa13.11□□□□□ -0.31
NUP50-208ENST00000430547 APOC4P55056 127 aa13.11□□□□□ -0.31
NUP50-208ENST00000430547 SRPXP78539 464 aa13.11□□□□□ -0.31
NUP50-208ENST00000430547 TMEM187Q14656 261 aa13.11□□□□□ -0.31
NUP50-208ENST00000430547 PVRIGQ6DKI7 326 aa13.11□□□□□ -0.31
NUP50-208ENST00000430547 TOMM20LQ6UXN7 152 aa13.11□□□□□ -0.31
NUP50-208ENST00000430547 TMEM230Q96A57 120 aa13.11□□□□□ -0.31
NUP50-208ENST00000430547 PUS1Q9Y606 427 aaKnown RBP eCLIP13.11□□□□□ -0.31
NUP50-208ENST00000430547 IGKV3-7A0A075B6H7 116 aa13.1□□□□□ -0.31
NUP50-208ENST00000430547 IGHV3OR16-13A0A075B7E8 117 aa13.1□□□□□ -0.31
NUP50-208ENST00000430547 IGHV3-74A0A0B4J1X5 117 aa13.1□□□□□ -0.31
NUP50-208ENST00000430547 CLN5O75503 358 aa13.1□□□□□ -0.31
NUP50-208ENST00000430547 NXPH3O95157 252 aa13.1□□□□□ -0.31
NUP50-208ENST00000430547 CD5P06127 495 aa13.1□□□□□ -0.31
NUP50-208ENST00000430547 PAFAH1B2P68402 229 aa13.1□□□□□ -0.31
NUP50-208ENST00000430547 BSXQ3C1V8 233 aa13.1□□□□□ -0.31
NUP50-208ENST00000430547 TMED4Q7Z7H5 227 aa13.1□□□□□ -0.31
NUP50-208ENST00000430547 SLC24A4Q8NFF2 622 aa13.1□□□□□ -0.31
NUP50-208ENST00000430547 PRR13Q9NZ81 148 aa13.1□□□□□ -0.31
NUP50-208ENST00000430547 V9GYH0 126 aa13.1□□□□□ -0.31
NUP50-208ENST00000430547 A0A0B4J2A0 478 aa13.09□□□□□ -0.31
NUP50-208ENST00000430547 TFPI2P48307 235 aa13.09□□□□□ -0.31
NUP50-208ENST00000430547 KLF9Q13886 244 aaPredicted RBP13.09□□□□□ -0.31
NUP50-208ENST00000430547 ODF3L2Q3SX64 289 aa13.09□□□□□ -0.31
NUP50-208ENST00000430547 SPANXN2Q5MJ10 180 aa13.09□□□□□ -0.31
NUP50-208ENST00000430547 NOXA1Q86UR1 476 aa13.09□□□□□ -0.31
NUP50-208ENST00000430547 LGI3Q8N145 548 aa13.09□□□□□ -0.31
NUP50-208ENST00000430547 OR4X1Q8NH49 305 aa13.09□□□□□ -0.31
NUP50-208ENST00000430547 IL17DQ8TAD2 202 aa13.09□□□□□ -0.31
NUP50-208ENST00000430547 TRIM63Q969Q1 353 aa13.09□□□□□ -0.31
NUP50-208ENST00000430547 ZNF414Q96IQ9 312 aa13.09□□□□□ -0.31
NUP50-208ENST00000430547 FNDC4Q9H6D8 234 aaPredicted RBP13.09□□□□□ -0.31
NUP50-208ENST00000430547 TMEM231Q9H6L2 316 aa13.09□□□□□ -0.31
NUP50-208ENST00000430547 SHPKQ9UHJ6 478 aa13.09□□□□□ -0.31
NUP50-208ENST00000430547 TRAV30A0A087WSZ9 112 aa13.08□□□□□ -0.32
NUP50-208ENST00000430547 CCR6P51684 374 aa13.08□□□□□ -0.32
NUP50-208ENST00000430547 CMC4P56277 68 aaPredicted RBP13.08□□□□□ -0.32
NUP50-208ENST00000430547 SMCO1Q147U7 214 aa13.08□□□□□ -0.32
NUP50-208ENST00000430547 C2orf83Q53S99 150 aa13.08□□□□□ -0.32
NUP50-208ENST00000430547 TCF24Q7RTU0 167 aa13.08□□□□□ -0.32
NUP50-208ENST00000430547 RNASEH2CQ8TDP1 164 aaKnown RBP13.08□□□□□ -0.32
NUP50-208ENST00000430547 DEDD2Q8WXF8 326 aa13.08□□□□□ -0.32
NUP50-208ENST00000430547 NARS2Q96I59 477 aaKnown RBP13.08□□□□□ -0.32
NUP50-208ENST00000430547 RBM38Q9H0Z9 239 aaKnown RBP13.08□□□□□ -0.32
NUP50-208ENST00000430547 ZFAND3Q9H8U3 227 aa13.08□□□□□ -0.32
NUP50-208ENST00000430547 ZNF701M0R085 212 aaPredicted RBP13.07□□□□□ -0.32
NUP50-208ENST00000430547 SLC25A4P12235 298 aa13.07□□□□□ -0.32
NUP50-208ENST00000430547 NPPCP23582 126 aa13.07□□□□□ -0.32
NUP50-208ENST00000430547 NPY1RP25929 384 aa13.07□□□□□ -0.32
NUP50-208ENST00000430547 INPP1P49441 399 aa13.07□□□□□ -0.32
NUP50-208ENST00000430547 RPL11P62913 178 aaKnown RBP13.07□□□□□ -0.32
NUP50-208ENST00000430547 SUPT4H1P63272 117 aaKnown RBP13.07□□□□□ -0.32
NUP50-208ENST00000430547 ZNF79Q15937 498 aa13.07□□□□□ -0.32
NUP50-208ENST00000430547 MLANAQ16655 118 aa13.07□□□□□ -0.32
NUP50-208ENST00000430547 ETFRF1Q6IPR1 90 aa13.07□□□□□ -0.32
NUP50-208ENST00000430547 LYZL2Q7Z4W2 148 aa13.07□□□□□ -0.32
NUP50-208ENST00000430547 CCDC190Q86UF4 302 aa13.07□□□□□ -0.32
NUP50-208ENST00000430547 GBGT1Q8N5D6 347 aa13.07□□□□□ -0.32
NUP50-208ENST00000430547 ST8SIA2Q92186 375 aa13.07□□□□□ -0.32
NUP50-208ENST00000430547 METTL26Q96S19 204 aa13.07□□□□□ -0.32
NUP50-208ENST00000430547 MRPL36Q9P0J6 103 aaKnown RBP13.07□□□□□ -0.32
NUP50-208ENST00000430547 A0A1B0GU03 582 aa13.06□□□□□ -0.32
NUP50-208ENST00000430547 A0A1W2PS18 150 aa13.06□□□□□ -0.32
NUP50-208ENST00000430547 DNASE2O00115 360 aaPredicted RBP13.06□□□□□ -0.32
NUP50-208ENST00000430547 IFNA10P01566 189 aa13.06□□□□□ -0.32
NUP50-208ENST00000430547 VAMP1P23763 118 aa13.06□□□□□ -0.32
NUP50-208ENST00000430547 TNFRSF9Q07011 255 aa13.06□□□□□ -0.32
NUP50-208ENST00000430547 TMEM128Q5BJH2 165 aa13.06□□□□□ -0.32
NUP50-208ENST00000430547 NMSQ5H8A3 153 aa13.06□□□□□ -0.32
NUP50-208ENST00000430547 STPG3Q8N7X2 389 aa13.06□□□□□ -0.32
NUP50-208ENST00000430547 OR1S1Q8NH92 325 aa13.06□□□□□ -0.32
NUP50-208ENST00000430547 SLC25A21Q9BQT8 299 aaPredicted RBP13.06□□□□□ -0.32
NUP50-208ENST00000430547 VSIRQ9H7M9 311 aa13.06□□□□□ -0.32
NUP50-208ENST00000430547 IGHV3-66A0A0C4DH42 116 aa13.05□□□□□ -0.32
NUP50-208ENST00000430547 DUXBA0A1W2PPF3 345 aa13.05□□□□□ -0.32
NUP50-208ENST00000430547 UBE2CO00762 179 aa13.05□□□□□ -0.32
NUP50-208ENST00000430547 RPL35AP18077 110 aaKnown RBP13.05□□□□□ -0.32
NUP50-208ENST00000430547 RND2P52198 227 aa13.05□□□□□ -0.32
NUP50-208ENST00000430547 TIGITQ495A1 244 aa13.05□□□□□ -0.32
NUP50-208ENST00000430547 FAM90A2PQ658T7 463 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms