RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 RNF122Q9H9V4 155 aa1.57□□□□□ -2.16
HMGB1P9-201ENST00000429856 XAGE1AQ9HD64 81 aa1.57□□□□□ -2.16
HMGB1P9-201ENST00000429856 SPANXA1Q9NS26 97 aa1.57□□□□□ -2.16
HMGB1P9-201ENST00000429856 ASF1BQ9NVP2 202 aa1.57□□□□□ -2.16
HMGB1P9-201ENST00000429856 RASL12Q9NYN1 266 aa1.57□□□□□ -2.16
HMGB1P9-201ENST00000429856 HEY1Q9Y5J3 304 aa1.57□□□□□ -2.16
HMGB1P9-201ENST00000429856 LTBP4Q8N2S1 1624 aa1.57□□□□□ -2.16
HMGB1P9-201ENST00000429856 PTPRBP23467 1997 aa1.57□□□□□ -2.16
HMGB1P9-201ENST00000429856 UHRF1BP1Q6BDS2 1440 aa1.57□□□□□ -2.16
HMGB1P9-201ENST00000429856 TAF1LQ8IZX4 1826 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 ARAP1Q96P48 1450 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 ADGBQ8N7X0 1667 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 A0A0D9SEW6 157 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 A0A1W2PQD3 144 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 ARL5CA6NH57 179 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 UBFD1O14562 309 aaKnown RBP1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 TAX1BP3O14907 124 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 DEGS1O15121 323 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 CYB5BO43169 146 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 CPSF4O95639 269 aaKnown RBP1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 IGHV3-7P01780 117 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 C1QAP02745 245 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 OGNP20774 298 aaKnown RBP1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 RPS3P23396 243 aaKnown RBP eCLIP1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 S100A4P26447 101 aaKnown RBP1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 PSMB8P28062 276 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 AKR1C3P42330 323 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 XCL1P47992 114 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 INSL3P51460 131 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 POLR2HP52434 150 aaKnown RBP1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 GTF2A1P52655 376 aaPredicted RBP1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 AKR1C1Q04828 323 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 ZNF141Q15928 474 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 MIAQ16674 131 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 DEFB115Q30KQ5 88 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 LINC01554Q52M75 96 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 FKBP1CQ5VVH2 108 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 ZFAND6Q6FIF0 208 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 BPIFA4PQ86YQ2 179 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 OR4D11Q8NGI4 311 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 TERB2Q8NHR7 220 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 WFDC5Q8TCV5 224 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 DNAJC9Q8WXX5 260 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 FGF13Q92913 245 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 SLAMF6Q96DU3 332 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 TCEAL4Q96EI5 215 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 GPX7Q96SL4 187 aaPredicted RBP1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 AICDAQ9GZX7 198 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 TMEM133Q9H2Q1 129 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 TUBA4BQ9H853 241 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 WDR90Q96KV7 1748 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 TECPR2O15040 1411 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 SCN8AQ9UQD0 1980 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 CCDC88CQ9P219 2028 aa1.56□□□□□ -2.16
HMGB1P9-201ENST00000429856 SLX4Q8IY92 1834 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 IGKV1-9A0A0C4DH69 117 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 H3BT86 120 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 H7BYZ3 331 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 M0R378 163 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 IGLV3-19P01714 112 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 IGKV1-16P04430 117 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 GZMBP10144 247 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 GPX2P18283 190 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 NFYBP25208 207 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 CCR2P41597 374 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 EVX1P49640 407 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 CKS1BP61024 79 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 AP1S1P61966 158 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 HIST1H4AP62805 103 aaKnown RBP1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 RPS28P62857 69 aaKnown RBP1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 FOXF1Q12946 379 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 SMIM21Q3B7S5 101 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 KRTAP21-2Q3LI59 83 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 CCDC58Q4VC31 144 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 SPANXN3Q5MJ09 141 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 HRCT1Q6UXD1 115 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 RPP25LQ8N5L8 163 aaKnown RBP1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 ZC2HC1AQ96GY0 325 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 TEX37Q96LM6 180 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 OR8B2Q96RD0 313 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 IMMP2LQ96T52 175 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 MIEN1Q9BRT3 115 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 SLC39A9Q9NUM3 307 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 CKLFQ9UBR5 152 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 NAT8Q9UHE5 227 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 TRAPPC2LQ9UL33 140 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 NUBP2Q9Y5Y2 271 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 MINOS1-NBL1R4GNA1 71 aa1.55□□□□□ -2.16
HMGB1P9-201ENST00000429856 N4BP2Q86UW6 1770 aaPredicted RBP1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 SDK2Q58EX2 2172 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 TRAV36DV7A0A075B6V5 113 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 A0A0J9YW62 118 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 A0A1W2PNN7 141 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 IRGMA1A4Y4 181 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 H3BPC8 53 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 J3KT08 172 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 NDUFA2O43678 99 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 OR2T1O43869 369 aa1.54□□□□□ -2.16
HMGB1P9-201ENST00000429856 GADD45GO95257 159 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms