RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 PNKDQ8N490 385 aa17.32■□□□□ 0.36
USP48-205ENST00000421625 SAP30LQ9HAJ7 183 aa17.32■□□□□ 0.36
USP48-205ENST00000421625 IGHV2-70DA0A0C4DH43 119 aa17.31■□□□□ 0.36
USP48-205ENST00000421625 CORTO00230 105 aa17.31■□□□□ 0.36
USP48-205ENST00000421625 CD59P13987 128 aa17.31■□□□□ 0.36
USP48-205ENST00000421625 PRCDQ00LT1 54 aa17.31■□□□□ 0.36
USP48-205ENST00000421625 TRIB1Q96RU8 372 aa17.31■□□□□ 0.36
USP48-205ENST00000421625 C21orf140B9A014 251 aa17.31■□□□□ 0.36
USP48-205ENST00000421625 Q6ZT83 130 aa17.31■□□□□ 0.36
USP48-205ENST00000421625 GCSAMQ8N6F7 178 aa17.31■□□□□ 0.36
USP48-205ENST00000421625 OR4C5Q8NGB2 326 aa17.31■□□□□ 0.36
USP48-205ENST00000421625 URB1-AS1Q96HZ7 61 aa17.31■□□□□ 0.36
USP48-205ENST00000421625 AMMECR1Q9Y4X0 333 aaPredicted RBP17.31■□□□□ 0.36
USP48-205ENST00000421625 VWC2LB2RUY7 222 aa17.3■□□□□ 0.36
USP48-205ENST00000421625 RASL11AQ6T310 242 aa17.3■□□□□ 0.36
USP48-205ENST00000421625 GRAMD2BQ96HH9 432 aa17.3■□□□□ 0.36
USP48-205ENST00000421625 LOXL4Q96JB6 756 aa17.3■□□□□ 0.36
USP48-205ENST00000421625 HEATR1Q9H583 2144 aaKnown RBP17.3■□□□□ 0.36
USP48-205ENST00000421625 SRRM4A7MD48 611 aaKnown RBP17.3■□□□□ 0.36
USP48-205ENST00000421625 IGKV1-16P04430 117 aa17.3■□□□□ 0.36
USP48-205ENST00000421625 HOXC12P31275 282 aa17.3■□□□□ 0.36
USP48-205ENST00000421625 CDKN1BP46527 198 aa17.3■□□□□ 0.36
USP48-205ENST00000421625 RTL8BQ17RB0 113 aa17.3■□□□□ 0.36
USP48-205ENST00000421625 OR10W1Q8NGF6 305 aa17.3■□□□□ 0.36
USP48-205ENST00000421625 ZPBPQ9BS86 351 aa17.3■□□□□ 0.36
USP48-205ENST00000421625 PRNDQ9UKY0 176 aa17.3■□□□□ 0.36
USP48-205ENST00000421625 RIF1Q5UIP0 2472 aaKnown RBP17.3■□□□□ 0.36
USP48-205ENST00000421625 M0QZ24 198 aa17.29■□□□□ 0.36
USP48-205ENST00000421625 ITGB1BP1O14713 200 aa17.29■□□□□ 0.36
USP48-205ENST00000421625 SAPCD1Q5SSQ6 148 aa17.29■□□□□ 0.36
USP48-205ENST00000421625 FAM201AQ5SY85 155 aa17.29■□□□□ 0.36
USP48-205ENST00000421625 DHRS13Q6UX07 377 aa17.29■□□□□ 0.36
USP48-205ENST00000421625 OR2V2Q96R30 315 aa17.29■□□□□ 0.36
USP48-205ENST00000421625 HIGD1CA8MV81 97 aa17.29■□□□□ 0.36
USP48-205ENST00000421625 SSBP2P81877 361 aaPredicted RBP17.29■□□□□ 0.36
USP48-205ENST00000421625 OR2T6Q8NHC8 308 aa17.29■□□□□ 0.36
USP48-205ENST00000421625 PPP1R35Q8TAP8 253 aa17.29■□□□□ 0.36
USP48-205ENST00000421625 TEX50A0A1B0GTY4 177 aa17.29■□□□□ 0.36
USP48-205ENST00000421625 PSMB11A5LHX3 300 aa17.29■□□□□ 0.36
USP48-205ENST00000421625 CGB3P0DN86 165 aa17.29■□□□□ 0.36
USP48-205ENST00000421625 CGB7P0DN87 165 aa17.29■□□□□ 0.36
USP48-205ENST00000421625 CD24P25063 80 aa17.29■□□□□ 0.36
USP48-205ENST00000421625 DUX4L9Q6RFH8 374 aaPredicted RBP17.29■□□□□ 0.36
USP48-205ENST00000421625 C19orf24Q9BVV8 132 aa17.29■□□□□ 0.36
USP48-205ENST00000421625 ZNRD1Q9P1U0 126 aa17.29■□□□□ 0.36
USP48-205ENST00000421625 OTOGLQ3ZCN5 2332 aa17.28■□□□□ 0.36
USP48-205ENST00000421625 UPK2O00526 184 aa17.28■□□□□ 0.36
USP48-205ENST00000421625 VWA1Q6PCB0 445 aa17.28■□□□□ 0.36
USP48-205ENST00000421625 FAM231DQ6ZW35 169 aa17.28■□□□□ 0.36
USP48-205ENST00000421625 RNASE2P10153 161 aaKnown RBP17.28■□□□□ 0.36
USP48-205ENST00000421625 CD46P15529 392 aa17.28■□□□□ 0.36
USP48-205ENST00000421625 VAMP3Q15836 100 aa17.28■□□□□ 0.36
USP48-205ENST00000421625 MSMPQ1L6U9 139 aa17.28■□□□□ 0.36
USP48-205ENST00000421625 MPV17L2Q567V2 206 aa17.28■□□□□ 0.36
USP48-205ENST00000421625 ZNF841Q6ZN19 808 aa17.28■□□□□ 0.36
USP48-205ENST00000421625 LINC00173Q6ZV60 143 aa17.28■□□□□ 0.36
USP48-205ENST00000421625 ZNF329Q86UD4 541 aa17.28■□□□□ 0.36
USP48-205ENST00000421625 SGK494Q96LW2 274 aa17.28■□□□□ 0.36
USP48-205ENST00000421625 PEX7O00628 323 aa17.27■□□□□ 0.36
USP48-205ENST00000421625 OR2J3O76001 311 aa17.27■□□□□ 0.36
USP48-205ENST00000421625 PLA2G2CQ5R387 149 aa17.27■□□□□ 0.36
USP48-205ENST00000421625 FAM120AOSQ5T036 256 aa17.27■□□□□ 0.36
USP48-205ENST00000421625 OR4C46A6NHA9 309 aa17.27■□□□□ 0.35
USP48-205ENST00000421625 ZNF883P0CG24 379 aa17.27■□□□□ 0.35
USP48-205ENST00000421625 CA7P43166 264 aa17.27■□□□□ 0.35
USP48-205ENST00000421625 GNG5P63218 68 aa17.27■□□□□ 0.35
USP48-205ENST00000421625 POU2AF1Q16633 256 aa17.27■□□□□ 0.35
USP48-205ENST00000421625 C2orf83Q53S99 150 aa17.27■□□□□ 0.35
USP48-205ENST00000421625 ATP1A1-AS1Q5TC04 95 aa17.27■□□□□ 0.35
USP48-205ENST00000421625 OR2D3Q8NGH3 330 aa17.27■□□□□ 0.35
USP48-205ENST00000421625 ZNF596Q8TC21 504 aa17.27■□□□□ 0.35
USP48-205ENST00000421625 TMEM70Q9BUB7 260 aa17.27■□□□□ 0.35
USP48-205ENST00000421625 SPENQ96T58 3664 aaKnown RBP17.27■□□□□ 0.35
USP48-205ENST00000421625 DSCAMO60469 2012 aa17.26■□□□□ 0.35
USP48-205ENST00000421625 CD69Q07108 199 aa17.26■□□□□ 0.35
USP48-205ENST00000421625 MOGAT3Q86VF5 341 aa17.26■□□□□ 0.35
USP48-205ENST00000421625 ZNF257Q9Y2Q1 563 aa17.26■□□□□ 0.35
USP48-205ENST00000421625 ZFHX4Q86UP3 3567 aa17.26■□□□□ 0.35
USP48-205ENST00000421625 MRPL32Q9BYC8 188 aaKnown RBP17.26■□□□□ 0.35
USP48-205ENST00000421625 hDV102S1A0JD36 115 aa17.25■□□□□ 0.35
USP48-205ENST00000421625 FOXA3P55318 350 aaPredicted RBP17.25■□□□□ 0.35
USP48-205ENST00000421625 MBNL2Q5VZF2 373 aaKnown RBP17.25■□□□□ 0.35
USP48-205ENST00000421625 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.25■□□□□ 0.35
USP48-205ENST00000421625 LAMA5O15230 3695 aa17.25■□□□□ 0.35
USP48-205ENST00000421625 TCF24Q7RTU0 167 aa17.25■□□□□ 0.35
USP48-205ENST00000421625 DSCAML1Q8TD84 2053 aa17.25■□□□□ 0.35
USP48-205ENST00000421625 KBTBD11-OT1A0A1B0GTJ5 212 aa17.25■□□□□ 0.35
USP48-205ENST00000421625 IGHV3-48P01763 117 aa17.25■□□□□ 0.35
USP48-205ENST00000421625 VHLLQ6RSH7 139 aa17.25■□□□□ 0.35
USP48-205ENST00000421625 PAXXQ9BUH6 204 aa17.25■□□□□ 0.35
USP48-205ENST00000421625 RNF24Q9Y225 148 aa17.25■□□□□ 0.35
USP48-205ENST00000421625 IGHV1-18A0A0C4DH31 117 aa17.24■□□□□ 0.35
USP48-205ENST00000421625 C7orf69Q9H7B7 122 aa17.24■□□□□ 0.35
USP48-205ENST00000421625 A0A1B0GXF2 115 aa17.24■□□□□ 0.35
USP48-205ENST00000421625 CT45A6P0DMU7 189 aa17.24■□□□□ 0.35
USP48-205ENST00000421625 CT45A5P0DMU8 189 aa17.24■□□□□ 0.35
USP48-205ENST00000421625 CT45A7P0DMV0 189 aa17.24■□□□□ 0.35
USP48-205ENST00000421625 ADTRPQ96IZ2 230 aa17.24■□□□□ 0.35
USP48-205ENST00000421625 COX7A2P2O60397 106 aa17.23■□□□□ 0.35
USP48-205ENST00000421625 PLAUP00749 431 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 702.2 ms