RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 DNAJC9Q8WXX5 260 aa2.9□□□□□ -1.95
LSM5-205ENST00000409952 OR8B2Q96RD0 313 aa2.9□□□□□ -1.95
LSM5-205ENST00000409952 TSC22D3Q99576 134 aa2.9□□□□□ -1.95
LSM5-205ENST00000409952 TMEM126AQ9H061 195 aa2.9□□□□□ -1.95
LSM5-205ENST00000409952 RBM7Q9Y580 266 aaKnown RBP2.9□□□□□ -1.95
LSM5-205ENST00000409952 OTOFQ9HC10 1997 aa2.9□□□□□ -1.95
LSM5-205ENST00000409952 DOCK3Q8IZD9 2030 aa2.9□□□□□ -1.95
LSM5-205ENST00000409952 HMGXB3Q12766 1538 aa2.89□□□□□ -1.95
LSM5-205ENST00000409952 A0A0D9SEW6 157 aa2.89□□□□□ -1.95
LSM5-205ENST00000409952 TLCD2A6NGC4 264 aa2.89□□□□□ -1.95
LSM5-205ENST00000409952 A8MU10 97 aa2.89□□□□□ -1.95
LSM5-205ENST00000409952 M0R378 163 aa2.89□□□□□ -1.95
LSM5-205ENST00000409952 TRGC2P03986 189 aa2.89□□□□□ -1.95
LSM5-205ENST00000409952 UCHL1P09936 223 aa2.89□□□□□ -1.95
LSM5-205ENST00000409952 BCL2P10415 239 aa2.89□□□□□ -1.95
LSM5-205ENST00000409952 SRP14P37108 136 aaKnown RBP2.89□□□□□ -1.95
LSM5-205ENST00000409952 CKS1BP61024 79 aa2.89□□□□□ -1.95
LSM5-205ENST00000409952 EIF5AP63241 154 aaKnown RBP2.89□□□□□ -1.95
LSM5-205ENST00000409952 OR8B8Q15620 311 aa2.89□□□□□ -1.95
LSM5-205ENST00000409952 RTL8BQ17RB0 113 aa2.89□□□□□ -1.95
LSM5-205ENST00000409952 SMIM21Q3B7S5 101 aa2.89□□□□□ -1.95
LSM5-205ENST00000409952 BRMS1LQ5PSV4 323 aa2.89□□□□□ -1.95
LSM5-205ENST00000409952 MIR17HGQ75NE6 70 aa2.89□□□□□ -1.95
LSM5-205ENST00000409952 OR8D4Q8NGM9 314 aa2.89□□□□□ -1.95
LSM5-205ENST00000409952 STAG3L4Q8TBR4 150 aa2.89□□□□□ -1.95
LSM5-205ENST00000409952 CANT1Q8WVQ1 401 aa2.89□□□□□ -1.95
LSM5-205ENST00000409952 TEX37Q96LM6 180 aa2.89□□□□□ -1.95
LSM5-205ENST00000409952 CARD19Q96LW7 228 aa2.89□□□□□ -1.95
LSM5-205ENST00000409952 IMMP2LQ96T52 175 aa2.89□□□□□ -1.95
LSM5-205ENST00000409952 DUSP21Q9H596 190 aa2.89□□□□□ -1.95
LSM5-205ENST00000409952 RIMS1Q86UR5 1692 aaKnown RBP2.88□□□□□ -1.95
LSM5-205ENST00000409952 PREX1Q8TCU6 1659 aa2.88□□□□□ -1.95
LSM5-205ENST00000409952 DOCK5Q9H7D0 1870 aa2.88□□□□□ -1.95
LSM5-205ENST00000409952 BCL9O00512 1426 aa2.88□□□□□ -1.95
LSM5-205ENST00000409952 NCOA3Q9Y6Q9 1424 aa2.88□□□□□ -1.95
LSM5-205ENST00000409952 TRAV36DV7A0A075B6V5 113 aa2.88□□□□□ -1.95
LSM5-205ENST00000409952 A0A087X0T9 212 aa2.88□□□□□ -1.95
LSM5-205ENST00000409952 TMEM212A6NML5 194 aa2.88□□□□□ -1.95
LSM5-205ENST00000409952 CREBL2O60519 120 aaPredicted RBP2.88□□□□□ -1.95
LSM5-205ENST00000409952 DBIP07108 87 aaKnown RBP2.88□□□□□ -1.95
LSM5-205ENST00000409952 DNAH10OSP0CZ25 163 aa2.88□□□□□ -1.95
LSM5-205ENST00000409952 EVX1P49640 407 aa2.88□□□□□ -1.95
LSM5-205ENST00000409952 INSL3P51460 131 aa2.88□□□□□ -1.95
LSM5-205ENST00000409952 PLCXD2Q0VAA5 305 aa2.88□□□□□ -1.95
LSM5-205ENST00000409952 EIF4EBP1Q13541 118 aaPredicted RBP2.88□□□□□ -1.95
LSM5-205ENST00000409952 KISS1Q15726 138 aa2.88□□□□□ -1.95
LSM5-205ENST00000409952 BCL2L15Q5TBC7 163 aa2.88□□□□□ -1.95
LSM5-205ENST00000409952 HIST3H2BBQ8N257 126 aa2.88□□□□□ -1.95
LSM5-205ENST00000409952 RPP25LQ8N5L8 163 aaKnown RBP2.88□□□□□ -1.95
LSM5-205ENST00000409952 C1orf64Q8NEQ6 169 aa2.88□□□□□ -1.95
LSM5-205ENST00000409952 OR5A1Q8NGJ0 315 aa2.88□□□□□ -1.95
LSM5-205ENST00000409952 DCANP1Q8TF63 244 aa2.88□□□□□ -1.95
LSM5-205ENST00000409952 FGF13Q92913 245 aa2.88□□□□□ -1.95
LSM5-205ENST00000409952 SCGB3A1Q96QR1 104 aa2.88□□□□□ -1.95
LSM5-205ENST00000409952 OSTCQ9NRP0 149 aa2.88□□□□□ -1.95
LSM5-205ENST00000409952 NAT8Q9UHE5 227 aa2.88□□□□□ -1.95
LSM5-205ENST00000409952 MED31Q9Y3C7 131 aa2.88□□□□□ -1.95
LSM5-205ENST00000409952 FAM215AQ9Y5M1 114 aa2.88□□□□□ -1.95
LSM5-205ENST00000409952 ATRXP46100 2492 aa2.88□□□□□ -1.95
LSM5-205ENST00000409952 TUBGCP6Q96RT7 1819 aa2.88□□□□□ -1.95
LSM5-205ENST00000409952 NLRC5Q86WI3 1866 aa2.88□□□□□ -1.95
LSM5-205ENST00000409952 TECPR2O15040 1411 aa2.87□□□□□ -1.95
LSM5-205ENST00000409952 MADDQ8WXG6 1647 aa2.87□□□□□ -1.95
LSM5-205ENST00000409952 TRDV1A0A1B0GX56 115 aa2.87□□□□□ -1.95
LSM5-205ENST00000409952 TMEM189A5PLL7 270 aa2.87□□□□□ -1.95
LSM5-205ENST00000409952 H3BT86 120 aa2.87□□□□□ -1.95
LSM5-205ENST00000409952 NDUFA2O43678 99 aa2.87□□□□□ -1.95
LSM5-205ENST00000409952 GGCTO75223 188 aaKnown RBP2.87□□□□□ -1.95
LSM5-205ENST00000409952 BPGMP07738 259 aa2.87□□□□□ -1.95
LSM5-205ENST00000409952 MSMBP08118 114 aa2.87□□□□□ -1.95
LSM5-205ENST00000409952 ZNF728P0DKX0 622 aa2.87□□□□□ -1.95
LSM5-205ENST00000409952 S100A11P31949 105 aa2.87□□□□□ -1.95
LSM5-205ENST00000409952 PSG9Q00887 426 aa2.87□□□□□ -1.95
LSM5-205ENST00000409952 EBI3Q14213 229 aa2.87□□□□□ -1.95
LSM5-205ENST00000409952 C1orf140Q5VVS0 124 aa2.87□□□□□ -1.95
LSM5-205ENST00000409952 AMMECR1LQ6DCA0 310 aa2.87□□□□□ -1.95
LSM5-205ENST00000409952 HRCT1Q6UXD1 115 aa2.87□□□□□ -1.95
LSM5-205ENST00000409952 SH2D6Q7Z4S9 175 aa2.87□□□□□ -1.95
LSM5-205ENST00000409952 DYNAPQ8N1N2 210 aa2.87□□□□□ -1.95
LSM5-205ENST00000409952 TMEM229BQ8NBD8 167 aa2.87□□□□□ -1.95
LSM5-205ENST00000409952 OR8J3Q8NGG0 315 aa2.87□□□□□ -1.95
LSM5-205ENST00000409952 WFDC5Q8TCV5 224 aa2.87□□□□□ -1.95
LSM5-205ENST00000409952 BORCS8Q96FH0 119 aa2.87□□□□□ -1.95
LSM5-205ENST00000409952 YIPF3Q9GZM5 350 aa2.87□□□□□ -1.95
LSM5-205ENST00000409952 TRAPPC2LQ9UL33 140 aa2.87□□□□□ -1.95
LSM5-205ENST00000409952 R4GN34 69 aa2.87□□□□□ -1.95
LSM5-205ENST00000409952 IFT140Q96RY7 1462 aa2.87□□□□□ -1.95
LSM5-205ENST00000409952 STRCQ7RTU9 1775 aa2.87□□□□□ -1.95
LSM5-205ENST00000409952 CROCCQ5TZA2 2017 aa2.86□□□□□ -1.95
LSM5-205ENST00000409952 KIAA0556O60303 1618 aa2.86□□□□□ -1.95
LSM5-205ENST00000409952 ADAMTS9Q9P2N4 1935 aa2.86□□□□□ -1.95
LSM5-205ENST00000409952 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.86□□□□□ -1.95
LSM5-205ENST00000409952 IGKV1-9A0A0C4DH69 117 aa2.86□□□□□ -1.95
LSM5-205ENST00000409952 H7BYZ3 331 aa2.86□□□□□ -1.95
LSM5-205ENST00000409952 OVOL1O14753 267 aa2.86□□□□□ -1.95
LSM5-205ENST00000409952 SLC22A1O15245 554 aa2.86□□□□□ -1.95
LSM5-205ENST00000409952 PSCAO43653 123 aa2.86□□□□□ -1.95
LSM5-205ENST00000409952 SYNGR2O43760 224 aa2.86□□□□□ -1.95
LSM5-205ENST00000409952 OR2T1O43869 369 aa2.86□□□□□ -1.95
LSM5-205ENST00000409952 CPSF4O95639 269 aaKnown RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms