RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 ADH4P08319 380 aa19.6■□□□□ 0.73
CSNK1E-203ENST00000396832 CA7P43166 264 aa19.6■□□□□ 0.73
CSNK1E-203ENST00000396832 RASL11AQ6T310 242 aa19.6■□□□□ 0.73
CSNK1E-203ENST00000396832 C1orf210Q8IVY1 113 aa19.6■□□□□ 0.73
CSNK1E-203ENST00000396832 LINC00479Q96M42 142 aa19.6■□□□□ 0.73
CSNK1E-203ENST00000396832 ZPBPQ9BS86 351 aa19.6■□□□□ 0.73
CSNK1E-203ENST00000396832 TMEM70Q9BUB7 260 aa19.6■□□□□ 0.73
CSNK1E-203ENST00000396832 CNOT1A5YKK6 2376 aaKnown RBP19.59■□□□□ 0.73
CSNK1E-203ENST00000396832 C19orf67A6NJJ6 358 aa19.59■□□□□ 0.73
CSNK1E-203ENST00000396832 ZNF596Q8TC21 504 aa19.59■□□□□ 0.73
CSNK1E-203ENST00000396832 ABCA1O95477 2261 aa19.59■□□□□ 0.73
CSNK1E-203ENST00000396832 OR2T8A6NH00 312 aa19.59■□□□□ 0.73
CSNK1E-203ENST00000396832 OR4C46A6NHA9 309 aa19.59■□□□□ 0.73
CSNK1E-203ENST00000396832 TNFSF15O95150 251 aa19.59■□□□□ 0.73
CSNK1E-203ENST00000396832 SRSF6Q13247 344 aaKnown RBP19.59■□□□□ 0.73
CSNK1E-203ENST00000396832 MSMPQ1L6U9 139 aa19.59■□□□□ 0.73
CSNK1E-203ENST00000396832 PEAR1Q5VY43 1037 aaPredicted RBP19.59■□□□□ 0.73
CSNK1E-203ENST00000396832 NUP35Q8NFH5 326 aa19.59■□□□□ 0.73
CSNK1E-203ENST00000396832 KALRNO60229 2985 aa19.58■□□□□ 0.73
CSNK1E-203ENST00000396832 CORO2AQ92828 525 aa19.58■□□□□ 0.73
CSNK1E-203ENST00000396832 ENY2Q9NPA8 101 aa19.58■□□□□ 0.72
CSNK1E-203ENST00000396832 SAA2P0DJI9 122 aaPredicted RBP19.57■□□□□ 0.72
CSNK1E-203ENST00000396832 INO80CQ6PI98 192 aaPredicted RBP19.57■□□□□ 0.72
CSNK1E-203ENST00000396832 Q6ZT83 130 aa19.57■□□□□ 0.72
CSNK1E-203ENST00000396832 DEFB108BQ8NET1 73 aa19.57■□□□□ 0.72
CSNK1E-203ENST00000396832 OR2T6Q8NHC8 308 aa19.57■□□□□ 0.72
CSNK1E-203ENST00000396832 C15orf61A6NNL5 157 aa19.57■□□□□ 0.72
CSNK1E-203ENST00000396832 CAMPP49913 170 aa19.57■□□□□ 0.72
CSNK1E-203ENST00000396832 LOXL3P58215 753 aa19.57■□□□□ 0.72
CSNK1E-203ENST00000396832 RPS20P60866 119 aaKnown RBP19.57■□□□□ 0.72
CSNK1E-203ENST00000396832 BVES-AS1Q5T3Y7 98 aa19.57■□□□□ 0.72
CSNK1E-203ENST00000396832 AMMECR1LQ6DCA0 310 aa19.57■□□□□ 0.72
CSNK1E-203ENST00000396832 PRR7Q8TB68 274 aa19.57■□□□□ 0.72
CSNK1E-203ENST00000396832 J3QW42 95 aa19.56■□□□□ 0.72
CSNK1E-203ENST00000396832 IGHV3-48P01763 117 aa19.56■□□□□ 0.72
CSNK1E-203ENST00000396832 MOGAT3Q86VF5 341 aa19.56■□□□□ 0.72
CSNK1E-203ENST00000396832 NUDT10Q8NFP7 164 aa19.56■□□□□ 0.72
CSNK1E-203ENST00000396832 ST20Q9HBF5 79 aa19.56■□□□□ 0.72
CSNK1E-203ENST00000396832 SH2D7A6NKC9 451 aaPredicted RBP19.56■□□□□ 0.72
CSNK1E-203ENST00000396832 C9orf106Q8NAJ2 232 aa19.56■□□□□ 0.72
CSNK1E-203ENST00000396832 MBD6Q96DN6 1003 aa19.56■□□□□ 0.72
CSNK1E-203ENST00000396832 A0A1W2PRE2 83 aa19.55■□□□□ 0.72
CSNK1E-203ENST00000396832 hDV102S1A0JD36 115 aa19.55■□□□□ 0.72
CSNK1E-203ENST00000396832 IGKV3-15P01624 115 aa19.55■□□□□ 0.72
CSNK1E-203ENST00000396832 FAM90A1Q86YD7 464 aa19.55■□□□□ 0.72
CSNK1E-203ENST00000396832 IGKV1OR2-108A0A075B7D4 117 aa19.55■□□□□ 0.72
CSNK1E-203ENST00000396832 MUC21A0A0G2JKD1 596 aa19.55■□□□□ 0.72
CSNK1E-203ENST00000396832 MUC21A0A140T8X8 626 aa19.55■□□□□ 0.72
CSNK1E-203ENST00000396832 C21orf140B9A014 251 aa19.55■□□□□ 0.72
CSNK1E-203ENST00000396832 SPRY3O43610 288 aa19.55■□□□□ 0.72
CSNK1E-203ENST00000396832 HSPE1P61604 102 aaKnown RBP19.55■□□□□ 0.72
CSNK1E-203ENST00000396832 MUC21Q5SSG8 566 aa19.55■□□□□ 0.72
CSNK1E-203ENST00000396832 DEFB125Q8N687 156 aa19.55■□□□□ 0.72
CSNK1E-203ENST00000396832 OR2V2Q96R30 315 aa19.55■□□□□ 0.72
CSNK1E-203ENST00000396832 S100A7P31151 101 aa19.55■□□□□ 0.72
CSNK1E-203ENST00000396832 TAS2R45P59539 299 aa19.55■□□□□ 0.72
CSNK1E-203ENST00000396832 SNRNP40Q96DI7 357 aaKnown RBP19.55■□□□□ 0.72
CSNK1E-203ENST00000396832 URB1-AS1Q96HZ7 61 aa19.55■□□□□ 0.72
CSNK1E-203ENST00000396832 CALYQ9NYX4 217 aa19.55■□□□□ 0.72
CSNK1E-203ENST00000396832 PKDREJQ9NTG1 2253 aa19.54■□□□□ 0.72
CSNK1E-203ENST00000396832 CT45A1Q5HYN5 189 aa19.54■□□□□ 0.72
CSNK1E-203ENST00000396832 GCSAMQ8N6F7 178 aa19.54■□□□□ 0.72
CSNK1E-203ENST00000396832 CT45A3Q8NHU0 189 aa19.54■□□□□ 0.72
CSNK1E-203ENST00000396832 RND1Q92730 232 aa19.54■□□□□ 0.72
CSNK1E-203ENST00000396832 JPT1Q9UK76 154 aa19.54■□□□□ 0.72
CSNK1E-203ENST00000396832 OR4S2Q8NH73 311 aa19.54■□□□□ 0.72
CSNK1E-203ENST00000396832 NUDT11Q96G61 164 aa19.54■□□□□ 0.72
CSNK1E-203ENST00000396832 GRAMD2BQ96HH9 432 aa19.54■□□□□ 0.72
CSNK1E-203ENST00000396832 TANC2Q9HCD6 1990 aa19.53■□□□□ 0.72
CSNK1E-203ENST00000396832 OR2J3O76001 311 aa19.53■□□□□ 0.72
CSNK1E-203ENST00000396832 KIR2DL2P43627 348 aaPredicted RBP19.53■□□□□ 0.72
CSNK1E-203ENST00000396832 CSTL1Q9H114 145 aa19.53■□□□□ 0.72
CSNK1E-203ENST00000396832 IGKV1-16P04430 117 aa19.53■□□□□ 0.72
CSNK1E-203ENST00000396832 MORN5Q5VZ52 161 aa19.53■□□□□ 0.72
CSNK1E-203ENST00000396832 SLC25A34Q6PIV7 304 aa19.53■□□□□ 0.72
CSNK1E-203ENST00000396832 OR9G1Q8NH87 305 aa19.53■□□□□ 0.72
CSNK1E-203ENST00000396832 CSMD1Q96PZ7 3565 aa19.52■□□□□ 0.72
CSNK1E-203ENST00000396832 TRAV5A0A0B4J249 113 aa19.52■□□□□ 0.72
CSNK1E-203ENST00000396832 IGHV1-18A0A0C4DH31 117 aa19.52■□□□□ 0.72
CSNK1E-203ENST00000396832 TOX4O94842 621 aa19.52■□□□□ 0.72
CSNK1E-203ENST00000396832 CCL11P51671 97 aa19.52■□□□□ 0.72
CSNK1E-203ENST00000396832 FAM120AOSQ5T036 256 aa19.52■□□□□ 0.72
CSNK1E-203ENST00000396832 FER1L6-AS2Q96M78 137 aa19.52■□□□□ 0.72
CSNK1E-203ENST00000396832 TMEM14BQ9NUH8 114 aa19.52■□□□□ 0.72
CSNK1E-203ENST00000396832 IDI2-AS1Q9NZ38 188 aa19.52■□□□□ 0.72
CSNK1E-203ENST00000396832 OR51B2Q9Y5P1 312 aa19.52■□□□□ 0.72
CSNK1E-203ENST00000396832 GVINP1Q7Z2Y8 2422 aa19.52■□□□□ 0.72
CSNK1E-203ENST00000396832 BPIFB3P59826 476 aa19.52■□□□□ 0.72
CSNK1E-203ENST00000396832 RTL8BQ17RB0 113 aa19.52■□□□□ 0.72
CSNK1E-203ENST00000396832 PRR27Q6MZM9 219 aa19.52■□□□□ 0.72
CSNK1E-203ENST00000396832 TRAT1Q6PIZ9 186 aa19.52■□□□□ 0.72
CSNK1E-203ENST00000396832 LINC00173Q6ZV60 143 aa19.52■□□□□ 0.72
CSNK1E-203ENST00000396832 LHFPL4Q7Z7J7 247 aa19.52■□□□□ 0.72
CSNK1E-203ENST00000396832 ATMQ13315 3056 aa19.52■□□□□ 0.71
CSNK1E-203ENST00000396832 LOC102724200A0A096LPH7 203 aaPredicted RBP19.51■□□□□ 0.71
CSNK1E-203ENST00000396832 HIGD1CA8MV81 97 aa19.51■□□□□ 0.71
CSNK1E-203ENST00000396832 CRXO43186 299 aaPredicted RBP19.51■□□□□ 0.71
CSNK1E-203ENST00000396832 C8orf88P0DMB2 117 aa19.51■□□□□ 0.71
CSNK1E-203ENST00000396832 OR10W1Q8NGF6 305 aa19.51■□□□□ 0.71
CSNK1E-203ENST00000396832 SGK494Q96LW2 274 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms