RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 PIP4P2Q8N4L2 257 aa7.36□□□□□ -1.23
MSH5-205ENST00000395853 CT45A3Q8NHU0 189 aa7.36□□□□□ -1.23
MSH5-205ENST00000395853 ZNF524Q96C55 264 aa7.36□□□□□ -1.23
MSH5-205ENST00000395853 PRELID3AQ96N28 172 aa7.36□□□□□ -1.23
MSH5-205ENST00000395853 NUDT22Q9BRQ3 303 aa7.36□□□□□ -1.23
MSH5-205ENST00000395853 GAGE2DQ9UEU5 116 aa7.36□□□□□ -1.23
MSH5-205ENST00000395853 U3KQA8 63 aa7.36□□□□□ -1.23
MSH5-205ENST00000395853 MED12LQ86YW9 2145 aa7.36□□□□□ -1.23
MSH5-205ENST00000395853 SPTA1P02549 2419 aa7.36□□□□□ -1.23
MSH5-205ENST00000395853 A0A0A6YYD4 124 aa7.36□□□□□ -1.23
MSH5-205ENST00000395853 A0A1W2PP11 408 aa7.36□□□□□ -1.23
MSH5-205ENST00000395853 H3BMG7 143 aa7.36□□□□□ -1.23
MSH5-205ENST00000395853 CX3CL1P78423 397 aa7.36□□□□□ -1.23
MSH5-205ENST00000395853 EIF3IQ13347 325 aaKnown RBP7.36□□□□□ -1.23
MSH5-205ENST00000395853 FNDC7Q5VTL7 733 aa7.36□□□□□ -1.23
MSH5-205ENST00000395853 TMEM178AQ8NBL3 297 aa7.36□□□□□ -1.23
MSH5-205ENST00000395853 OR5AN1Q8NGI8 311 aa7.36□□□□□ -1.23
MSH5-205ENST00000395853 KIR2DL5BQ8NHK3 375 aa7.36□□□□□ -1.23
MSH5-205ENST00000395853 ARHGAP5-AS1Q96IT6 56 aa7.36□□□□□ -1.23
MSH5-205ENST00000395853 CTXND1A0A1B0GTU2 59 aa7.36□□□□□ -1.23
MSH5-205ENST00000395853 APCSP02743 223 aa7.36□□□□□ -1.23
MSH5-205ENST00000395853 EGR1P18146 543 aa7.36□□□□□ -1.23
MSH5-205ENST00000395853 BLVRBP30043 206 aaPredicted RBP7.36□□□□□ -1.23
MSH5-205ENST00000395853 TMEM50BP56557 158 aa7.36□□□□□ -1.23
MSH5-205ENST00000395853 RPS4XP62701 263 aaKnown RBP7.36□□□□□ -1.23
MSH5-205ENST00000395853 CBLN3Q6UW01 205 aa7.36□□□□□ -1.23
MSH5-205ENST00000395853 OR10G7Q8NGN6 311 aa7.36□□□□□ -1.23
MSH5-205ENST00000395853 OR1L8Q8NGR8 309 aa7.36□□□□□ -1.23
MSH5-205ENST00000395853 MCRIP2Q9BUT9 160 aaKnown RBP7.36□□□□□ -1.23
MSH5-205ENST00000395853 AKIRIN1Q9H9L7 192 aaPredicted RBP7.36□□□□□ -1.23
MSH5-205ENST00000395853 TMEM160Q9NX00 188 aa7.36□□□□□ -1.23
MSH5-205ENST00000395853 LOC107984640A0A0U1RRK4 108 aa7.35□□□□□ -1.23
MSH5-205ENST00000395853 C17orf51A8MQB3 221 aa7.35□□□□□ -1.23
MSH5-205ENST00000395853 MPIG6BO95866 241 aa7.35□□□□□ -1.23
MSH5-205ENST00000395853 LINC00694P0DN24 101 aa7.35□□□□□ -1.23
MSH5-205ENST00000395853 HERV-K104P61576 105 aa7.35□□□□□ -1.23
MSH5-205ENST00000395853 PLXDC1Q8IUK5 500 aa7.35□□□□□ -1.23
MSH5-205ENST00000395853 OR4X2Q8NGF9 303 aa7.35□□□□□ -1.23
MSH5-205ENST00000395853 NAT6Q93015 286 aa7.35□□□□□ -1.23
MSH5-205ENST00000395853 SLC25A22Q9H936 323 aa7.35□□□□□ -1.23
MSH5-205ENST00000395853 TECRQ9NZ01 308 aaKnown RBP7.35□□□□□ -1.23
MSH5-205ENST00000395853 ALPK2Q86TB3 2170 aa7.35□□□□□ -1.23
MSH5-205ENST00000395853 IGKV3D-11A0A0A0MRZ8 115 aa7.35□□□□□ -1.23
MSH5-205ENST00000395853 A1L4Q6 167 aa7.35□□□□□ -1.23
MSH5-205ENST00000395853 CHST1O43916 411 aa7.35□□□□□ -1.23
MSH5-205ENST00000395853 NAPSAO96009 420 aa7.35□□□□□ -1.23
MSH5-205ENST00000395853 AMY1AP04745 511 aa7.35□□□□□ -1.23
MSH5-205ENST00000395853 CSN3P07498 182 aa7.35□□□□□ -1.23
MSH5-205ENST00000395853 CLRN1P58418 232 aa7.35□□□□□ -1.23
MSH5-205ENST00000395853 PSG5Q15238 335 aa7.35□□□□□ -1.23
MSH5-205ENST00000395853 EFNB3Q15768 340 aa7.35□□□□□ -1.23
MSH5-205ENST00000395853 DMRTC1Q5HYR2 192 aa7.35□□□□□ -1.23
MSH5-205ENST00000395853 TEPPQ6URK8 271 aa7.35□□□□□ -1.23
MSH5-205ENST00000395853 OR9G4Q8NGQ1 327 aa7.35□□□□□ -1.23
MSH5-205ENST00000395853 SAP30LQ9HAJ7 183 aa7.35□□□□□ -1.23
MSH5-205ENST00000395853 TNFRSF19Q9NS68 423 aa7.35□□□□□ -1.23
MSH5-205ENST00000395853 MPC1Q9Y5U8 109 aa7.35□□□□□ -1.23
MSH5-205ENST00000395853 CELSR3Q9NYQ7 3312 aa7.35□□□□□ -1.23
MSH5-205ENST00000395853 TRBV20OR9-2A0A075B6H5 130 aa7.34□□□□□ -1.23
MSH5-205ENST00000395853 IGKV1D-42A0A075B6H8 117 aa7.34□□□□□ -1.23
MSH5-205ENST00000395853 TRAV5A0A0B4J249 113 aa7.34□□□□□ -1.23
MSH5-205ENST00000395853 FAM90A26D6RGX4 464 aa7.34□□□□□ -1.23
MSH5-205ENST00000395853 J3KT08 172 aa7.34□□□□□ -1.23
MSH5-205ENST00000395853 SPINK4O60575 86 aa7.34□□□□□ -1.23
MSH5-205ENST00000395853 IGKV3-11P04433 115 aa7.34□□□□□ -1.23
MSH5-205ENST00000395853 SLC25A5P05141 298 aaKnown RBP7.34□□□□□ -1.23
MSH5-205ENST00000395853 FAM106CPP0CH98 169 aa7.34□□□□□ -1.23
MSH5-205ENST00000395853 MGST1P10620 155 aaKnown RBP7.34□□□□□ -1.23
MSH5-205ENST00000395853 SEC61GP60059 68 aa7.34□□□□□ -1.23
MSH5-205ENST00000395853 FAM106AQ4KMX7 169 aa7.34□□□□□ -1.23
MSH5-205ENST00000395853 PHLDA2Q53GA4 152 aa7.34□□□□□ -1.23
MSH5-205ENST00000395853 FAM57BQ71RH2 274 aa7.34□□□□□ -1.23
MSH5-205ENST00000395853 H2BFWTQ7Z2G1 175 aa7.34□□□□□ -1.23
MSH5-205ENST00000395853 LRRC75A-AS1Q8N1F1 130 aa7.34□□□□□ -1.23
MSH5-205ENST00000395853 B9D1Q9UPM9 204 aa7.34□□□□□ -1.23
MSH5-205ENST00000395853 NCKAP5O14513 1909 aa7.34□□□□□ -1.23
MSH5-205ENST00000395853 A0A1W2PNU3 283 aaPredicted RBP7.34□□□□□ -1.23
MSH5-205ENST00000395853 IGKV1D-33P01593 117 aa7.34□□□□□ -1.23
MSH5-205ENST00000395853 IGKV1-33P01594 117 aa7.34□□□□□ -1.23
MSH5-205ENST00000395853 FGF6P10767 208 aa7.34□□□□□ -1.23
MSH5-205ENST00000395853 GP1BBP13224 206 aa7.34□□□□□ -1.23
MSH5-205ENST00000395853 ID3Q02535 119 aa7.34□□□□□ -1.23
MSH5-205ENST00000395853 NMSQ5H8A3 153 aa7.34□□□□□ -1.23
MSH5-205ENST00000395853 HLA-DQA1Q5Y7H0 255 aa7.34□□□□□ -1.23
MSH5-205ENST00000395853 OTOSQ8NHW6 89 aa7.34□□□□□ -1.23
MSH5-205ENST00000395853 OCC1Q8TAD7 63 aa7.34□□□□□ -1.23
MSH5-205ENST00000395853 SGK494Q96LW2 274 aa7.34□□□□□ -1.23
MSH5-205ENST00000395853 TMEM59Q9BXS4 323 aa7.34□□□□□ -1.23
MSH5-205ENST00000395853 PRO0461Q9UI25 63 aa7.34□□□□□ -1.23
MSH5-205ENST00000395853 C15orf65H3BRN8 121 aa7.33□□□□□ -1.24
MSH5-205ENST00000395853 LEPROTL1O95214 131 aa7.33□□□□□ -1.24
MSH5-205ENST00000395853 CRYAAP02489 173 aa7.33□□□□□ -1.24
MSH5-205ENST00000395853 SLC35B1P78383 322 aa7.33□□□□□ -1.24
MSH5-205ENST00000395853 PRR30Q53SZ7 412 aaPredicted RBP7.33□□□□□ -1.24
MSH5-205ENST00000395853 IBA57Q5T440 356 aaKnown RBP7.33□□□□□ -1.24
MSH5-205ENST00000395853 SLC25A47Q6Q0C1 308 aa7.33□□□□□ -1.24
MSH5-205ENST00000395853 H1FNTQ75WM6 255 aaPredicted RBP7.33□□□□□ -1.24
MSH5-205ENST00000395853 FADS6Q8N9I5 356 aa7.33□□□□□ -1.24
MSH5-205ENST00000395853 H1FXQ92522 213 aaKnown RBP7.33□□□□□ -1.24
MSH5-205ENST00000395853 LOC107986453A0A1B0GWG9 222 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms