RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 IGLV11-55A0A075B6I3 123 aa10.75□□□□□ -0.69
VAPB-202ENST00000395802 LINC01548A6NM66 108 aa10.75□□□□□ -0.69
VAPB-202ENST00000395802 CRLF1O75462 422 aa10.75□□□□□ -0.69
VAPB-202ENST00000395802 RUNX1Q01196 453 aa10.75□□□□□ -0.69
VAPB-202ENST00000395802 KLK9Q2XQG4 91 aa10.75□□□□□ -0.69
VAPB-202ENST00000395802 Q71RC1 249 aaPredicted RBP10.75□□□□□ -0.69
VAPB-202ENST00000395802 Q8N2B8 174 aa10.75□□□□□ -0.69
VAPB-202ENST00000395802 NECAP1Q8NC96 275 aa10.75□□□□□ -0.69
VAPB-202ENST00000395802 OR2T6Q8NHC8 308 aa10.75□□□□□ -0.69
VAPB-202ENST00000395802 GAR1Q9NY12 217 aaKnown RBP10.75□□□□□ -0.69
VAPB-202ENST00000395802 KLK9Q9UKQ9 250 aa10.75□□□□□ -0.69
VAPB-202ENST00000395802 G3V318 75 aa10.74□□□□□ -0.69
VAPB-202ENST00000395802 TCF21O43680 179 aa10.74□□□□□ -0.69
VAPB-202ENST00000395802 MT-CO2P00403 227 aa10.74□□□□□ -0.69
VAPB-202ENST00000395802 TMEM116Q8NCL8 245 aa10.74□□□□□ -0.69
VAPB-202ENST00000395802 TAF15Q92804 592 aaKnown RBP eCLIP10.74□□□□□ -0.69
VAPB-202ENST00000395802 DUX5Q96PT3 197 aa10.74□□□□□ -0.69
VAPB-202ENST00000395802 WDR83OSQ9Y284 106 aa10.74□□□□□ -0.69
VAPB-202ENST00000395802 TIMM9Q9Y5J7 89 aa10.74□□□□□ -0.69
VAPB-202ENST00000395802 TMEM89A2RUT3 159 aa10.74□□□□□ -0.69
VAPB-202ENST00000395802 FAM181BA6NEQ2 426 aa10.74□□□□□ -0.69
VAPB-202ENST00000395802 ZNF705EA8MWA4 302 aaPredicted RBP10.74□□□□□ -0.69
VAPB-202ENST00000395802 FGF7P21781 194 aa10.74□□□□□ -0.69
VAPB-202ENST00000395802 S100A1P23297 94 aa10.74□□□□□ -0.69
VAPB-202ENST00000395802 NPBWR1P48145 328 aa10.74□□□□□ -0.69
VAPB-202ENST00000395802 MFAP2P55001 183 aa10.74□□□□□ -0.69
VAPB-202ENST00000395802 SERF2P84101 59 aa10.74□□□□□ -0.69
VAPB-202ENST00000395802 GAMTQ14353 236 aa10.74□□□□□ -0.69
VAPB-202ENST00000395802 BTNL8Q6UX41 500 aa10.74□□□□□ -0.69
VAPB-202ENST00000395802 TREML4Q6UXN2 200 aa10.74□□□□□ -0.69
VAPB-202ENST00000395802 VN1R17PQ8TDU5 208 aa10.74□□□□□ -0.69
VAPB-202ENST00000395802 SAT2Q96F10 170 aaPredicted RBP10.74□□□□□ -0.69
VAPB-202ENST00000395802 FANCD2OSQ96PS1 177 aa10.74□□□□□ -0.69
VAPB-202ENST00000395802 CITED4Q96RK1 184 aa10.74□□□□□ -0.69
VAPB-202ENST00000395802 PSMG3Q9BT73 122 aaPredicted RBP10.74□□□□□ -0.69
VAPB-202ENST00000395802 RFNGQ9Y644 331 aa10.74□□□□□ -0.69
VAPB-202ENST00000395802 FAM223BA6NKX1 122 aa10.73□□□□□ -0.69
VAPB-202ENST00000395802 I3L2K1 104 aa10.73□□□□□ -0.69
VAPB-202ENST00000395802 C19orf54Q5BKX5 351 aa10.73□□□□□ -0.69
VAPB-202ENST00000395802 FAM223AQ8IWN6 122 aa10.73□□□□□ -0.69
VAPB-202ENST00000395802 OR4X1Q8NH49 305 aa10.73□□□□□ -0.69
VAPB-202ENST00000395802 TXN2Q99757 166 aa10.73□□□□□ -0.69
VAPB-202ENST00000395802 ZNF702PQ9H963 129 aa10.73□□□□□ -0.69
VAPB-202ENST00000395802 FBXL7Q9UJT9 491 aa10.73□□□□□ -0.69
VAPB-202ENST00000395802 TRAV30A0A087WSZ9 112 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 TRBV9A0A0B4J1U6 114 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 A0A0G2JLM5 398 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 MFSD2BA6NFX1 497 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 TEX46H3BTG2 121 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 FABP1P07148 127 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 PPIFP30405 207 aaKnown RBP10.72□□□□□ -0.69
VAPB-202ENST00000395802 RAB5CP51148 216 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 FAM209BQ5JX69 171 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 PXDC1Q5TGL8 231 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 ACSM6Q6P461 480 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 TMEM182Q6ZP80 229 aaPredicted RBP10.72□□□□□ -0.69
VAPB-202ENST00000395802 OR2G3Q8NGZ4 309 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 ACY3Q96HD9 319 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 USMG5Q96IX5 58 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 ATP6V0BQ99437 205 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 NPCDR1Q9BY65 106 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 FNDC4Q9H6D8 234 aaPredicted RBP10.72□□□□□ -0.69
VAPB-202ENST00000395802 ESM1Q9NQ30 184 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 PFDN2Q9UHV9 154 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 LSM4Q9Y4Z0 139 aaKnown RBP10.72□□□□□ -0.69
VAPB-202ENST00000395802 NSD1Q96L73 2696 aaPredicted RBP10.72□□□□□ -0.69
VAPB-202ENST00000395802 ZFP92A6NM28 416 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 UMAD1C9J7I0 102 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 OR2J3O76001 311 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 MBP02144 154 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 PRH1P02810 166 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 MDKP21741 143 aaPredicted RBP10.72□□□□□ -0.69
VAPB-202ENST00000395802 CAMLGP49069 296 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 MFAP4P55083 255 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 TEX38Q6PEX7 206 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 CENPVQ7Z7K6 275 aaPredicted RBP10.72□□□□□ -0.69
VAPB-202ENST00000395802 COMMD1Q8N668 190 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 NOL4LQ96MY1 436 aaPredicted RBP10.72□□□□□ -0.69
VAPB-202ENST00000395802 RSG1Q9BU20 258 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 C21orf62Q9NYP8 219 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 LINC00527Q9UJ94 153 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 DMRT1Q9Y5R6 373 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 F8P00451 2351 aa10.72□□□□□ -0.69
VAPB-202ENST00000395802 TRBV7-1A0A0A6YYK4 115 aa10.71□□□□□ -0.69
VAPB-202ENST00000395802 K7EIM0 57 aa10.71□□□□□ -0.69
VAPB-202ENST00000395802 IGLV1-40P01703 118 aa10.71□□□□□ -0.69
VAPB-202ENST00000395802 TRGV3P03979 118 aa10.71□□□□□ -0.69
VAPB-202ENST00000395802 FCGR2BP31994 310 aaPredicted RBP10.71□□□□□ -0.69
VAPB-202ENST00000395802 FHITP49789 147 aa10.71□□□□□ -0.69
VAPB-202ENST00000395802 RND2P52198 227 aa10.71□□□□□ -0.69
VAPB-202ENST00000395802 SELENOTP62341 195 aa10.71□□□□□ -0.69
VAPB-202ENST00000395802 RHOGP84095 191 aa10.71□□□□□ -0.69
VAPB-202ENST00000395802 C15orf32Q32M92 178 aa10.71□□□□□ -0.69
VAPB-202ENST00000395802 Q6ZRG5 221 aa10.71□□□□□ -0.69
VAPB-202ENST00000395802 Q6ZS46 218 aa10.71□□□□□ -0.69
VAPB-202ENST00000395802 C19orf35Q6ZS72 473 aa10.71□□□□□ -0.69
VAPB-202ENST00000395802 NPIPB3Q92617 1050 aa10.71□□□□□ -0.69
VAPB-202ENST00000395802 EEF1AKMT3Q96AZ1 226 aa10.71□□□□□ -0.69
VAPB-202ENST00000395802 PSMB11A5LHX3 300 aa10.7□□□□□ -0.7
VAPB-202ENST00000395802 CLN5O75503 358 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms