RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 SLIRPQ9GZT3 109 aaKnown RBP11.91□□□□□ -0.5
CXCL12-206ENST00000395795 NAA60Q9H7X0 242 aa11.91□□□□□ -0.5
CXCL12-206ENST00000395795 A0A0J9YWU9 116 aa11.9□□□□□ -0.5
CXCL12-206ENST00000395795 RGS5O15539 181 aa11.9□□□□□ -0.5
CXCL12-206ENST00000395795 SPRY2O43597 315 aa11.9□□□□□ -0.5
CXCL12-206ENST00000395795 B3GALNT1O75752 331 aa11.9□□□□□ -0.5
CXCL12-206ENST00000395795 YIF1AO95070 293 aa11.9□□□□□ -0.5
CXCL12-206ENST00000395795 IGKV1-17P01599 117 aa11.9□□□□□ -0.5
CXCL12-206ENST00000395795 RPL35AP18077 110 aaKnown RBP11.9□□□□□ -0.5
CXCL12-206ENST00000395795 TNFRSF9Q07011 255 aa11.9□□□□□ -0.5
CXCL12-206ENST00000395795 MEF2DQ14814 521 aa11.9□□□□□ -0.5
CXCL12-206ENST00000395795 SURF2Q15527 256 aaPredicted RBP11.9□□□□□ -0.5
CXCL12-206ENST00000395795 TRIM16LQ309B1 348 aa11.9□□□□□ -0.5
CXCL12-206ENST00000395795 FAM24BQ8N5W8 94 aa11.9□□□□□ -0.5
CXCL12-206ENST00000395795 OR52E5Q8NH55 327 aa11.9□□□□□ -0.5
CXCL12-206ENST00000395795 GPR146Q96CH1 333 aa11.9□□□□□ -0.5
CXCL12-206ENST00000395795 PUS1Q9Y606 427 aaKnown RBP eCLIP11.9□□□□□ -0.5
CXCL12-206ENST00000395795 TEX13DA0A0J9YY54 714 aaPredicted RBP11.89□□□□□ -0.51
CXCL12-206ENST00000395795 ANKRD20A5PA0PJZ0 165 aa11.89□□□□□ -0.51
CXCL12-206ENST00000395795 CRYM-AS1A6NIL9 109 aa11.89□□□□□ -0.51
CXCL12-206ENST00000395795 UBE2CO00762 179 aa11.89□□□□□ -0.51
CXCL12-206ENST00000395795 GSTZ1O43708 216 aaPredicted RBP11.89□□□□□ -0.51
CXCL12-206ENST00000395795 IFNA17P01571 189 aa11.89□□□□□ -0.51
CXCL12-206ENST00000395795 NPBWR1P48145 328 aa11.89□□□□□ -0.51
CXCL12-206ENST00000395795 APOC4P55056 127 aa11.89□□□□□ -0.51
CXCL12-206ENST00000395795 ZNF600Q6ZNG1 722 aa11.89□□□□□ -0.51
CXCL12-206ENST00000395795 LYG2Q86SG7 212 aa11.89□□□□□ -0.51
CXCL12-206ENST00000395795 DUSP18Q8NEJ0 188 aa11.89□□□□□ -0.51
CXCL12-206ENST00000395795 OR4X1Q8NH49 305 aa11.89□□□□□ -0.51
CXCL12-206ENST00000395795 GALNT14Q96FL9 552 aa11.89□□□□□ -0.51
CXCL12-206ENST00000395795 TMEM56-RWDD3S4R434 201 aa11.89□□□□□ -0.51
CXCL12-206ENST00000395795 IGKV3-7A0A075B6H7 116 aa11.88□□□□□ -0.51
CXCL12-206ENST00000395795 CLN5O75503 358 aa11.88□□□□□ -0.51
CXCL12-206ENST00000395795 DFFBO76075 338 aa11.88□□□□□ -0.51
CXCL12-206ENST00000395795 BMI1P35226 326 aa11.88□□□□□ -0.51
CXCL12-206ENST00000395795 SNCAP37840 140 aa11.88□□□□□ -0.51
CXCL12-206ENST00000395795 TFPI2P48307 235 aa11.88□□□□□ -0.51
CXCL12-206ENST00000395795 SPCS3P61009 180 aa11.88□□□□□ -0.51
CXCL12-206ENST00000395795 TCF24Q7RTU0 167 aa11.88□□□□□ -0.51
CXCL12-206ENST00000395795 FAM219AQ8IW50 185 aa11.88□□□□□ -0.51
CXCL12-206ENST00000395795 GBGT1Q8N5D6 347 aa11.88□□□□□ -0.51
CXCL12-206ENST00000395795 OR51S1Q8NGJ8 323 aa11.88□□□□□ -0.51
CXCL12-206ENST00000395795 MCFD2Q8NI22 146 aa11.88□□□□□ -0.51
CXCL12-206ENST00000395795 RBPMSQ93062 196 aaKnown RBP11.88□□□□□ -0.51
CXCL12-206ENST00000395795 DIRAS2Q96HU8 199 aa11.88□□□□□ -0.51
CXCL12-206ENST00000395795 PRR13Q9NZ81 148 aa11.88□□□□□ -0.51
CXCL12-206ENST00000395795 IGHV3-66A0A0C4DH42 116 aa11.87□□□□□ -0.51
CXCL12-206ENST00000395795 ATG12O94817 140 aa11.87□□□□□ -0.51
CXCL12-206ENST00000395795 NXPH3O95157 252 aa11.87□□□□□ -0.51
CXCL12-206ENST00000395795 AKAIN1P0CW23 69 aa11.87□□□□□ -0.51
CXCL12-206ENST00000395795 HOXA1P49639 335 aaPredicted RBP11.87□□□□□ -0.51
CXCL12-206ENST00000395795 SUPT4H1P63272 117 aaKnown RBP11.87□□□□□ -0.51
CXCL12-206ENST00000395795 TMEM187Q14656 261 aa11.87□□□□□ -0.51
CXCL12-206ENST00000395795 RRNAD1Q96FB5 475 aaKnown RBP11.87□□□□□ -0.51
CXCL12-206ENST00000395795 C6orf62Q9GZU0 229 aaPredicted RBP11.87□□□□□ -0.51
CXCL12-206ENST00000395795 MS4A6AQ9H2W1 248 aa11.87□□□□□ -0.51
CXCL12-206ENST00000395795 CACNG5Q9UF02 275 aa11.87□□□□□ -0.51
CXCL12-206ENST00000395795 BIRC6Q9NR09 4857 aa11.87□□□□□ -0.51
CXCL12-206ENST00000395795 CORTO00230 105 aa11.86□□□□□ -0.51
CXCL12-206ENST00000395795 ATF4P18848 351 aaPredicted RBP11.86□□□□□ -0.51
CXCL12-206ENST00000395795 CRYBB3P26998 211 aa11.86□□□□□ -0.51
CXCL12-206ENST00000395795 TNFSF8P32971 234 aa11.86□□□□□ -0.51
CXCL12-206ENST00000395795 IL18Q14116 193 aa11.86□□□□□ -0.51
CXCL12-206ENST00000395795 C2orf83Q53S99 150 aa11.86□□□□□ -0.51
CXCL12-206ENST00000395795 NMSQ5H8A3 153 aa11.86□□□□□ -0.51
CXCL12-206ENST00000395795 PRSS54Q6PEW0 395 aa11.86□□□□□ -0.51
CXCL12-206ENST00000395795 STPG3Q8N7X2 389 aa11.86□□□□□ -0.51
CXCL12-206ENST00000395795 GINS3Q9BRX5 216 aa11.86□□□□□ -0.51
CXCL12-206ENST00000395795 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.86□□□□□ -0.51
CXCL12-206ENST00000395795 U3KQE9 123 aa11.86□□□□□ -0.51
CXCL12-206ENST00000395795 DISC1C4P0D8 188 aa11.85□□□□□ -0.51
CXCL12-206ENST00000395795 GIG44P09565 113 aaPredicted RBP11.85□□□□□ -0.51
CXCL12-206ENST00000395795 IGLC1P0CG04 106 aa11.85□□□□□ -0.51
CXCL12-206ENST00000395795 DHODHQ02127 395 aa11.85□□□□□ -0.51
CXCL12-206ENST00000395795 CNPY1Q3B7I2 92 aa11.85□□□□□ -0.51
CXCL12-206ENST00000395795 TIGITQ495A1 244 aa11.85□□□□□ -0.51
CXCL12-206ENST00000395795 TMEM268Q5VZI3 342 aa11.85□□□□□ -0.51
CXCL12-206ENST00000395795 C14orf166Q9Y224 244 aaKnown RBP11.85□□□□□ -0.51
CXCL12-206ENST00000395795 TRAV2A0A0B4J234 112 aa11.84□□□□□ -0.51
CXCL12-206ENST00000395795 S100A5P33763 92 aa11.84□□□□□ -0.51
CXCL12-206ENST00000395795 OPRK1P41145 380 aa11.84□□□□□ -0.51
CXCL12-206ENST00000395795 SUB1P53999 127 aaKnown RBP eCLIP11.84□□□□□ -0.51
CXCL12-206ENST00000395795 TRIM63Q969Q1 353 aa11.84□□□□□ -0.51
CXCL12-206ENST00000395795 PRRT1Q99946 306 aa11.84□□□□□ -0.51
CXCL12-206ENST00000395795 PDCD10Q9BUL8 212 aa11.84□□□□□ -0.51
CXCL12-206ENST00000395795 CSTL1Q9H114 145 aa11.84□□□□□ -0.51
CXCL12-206ENST00000395795 RABL2AQ9UBK7 228 aaPredicted RBP11.84□□□□□ -0.51
CXCL12-206ENST00000395795 RABL2BQ9UNT1 228 aa11.84□□□□□ -0.51
CXCL12-206ENST00000395795 K7EQG2 157 aa11.83□□□□□ -0.52
CXCL12-206ENST00000395795 JTBO76095 146 aa11.83□□□□□ -0.52
CXCL12-206ENST00000395795 CD5P06127 495 aa11.83□□□□□ -0.52
CXCL12-206ENST00000395795 HTR2BP41595 481 aa11.83□□□□□ -0.52
CXCL12-206ENST00000395795 KLF9Q13886 244 aaPredicted RBP11.83□□□□□ -0.52
CXCL12-206ENST00000395795 RBMS2Q15434 407 aaKnown RBP11.83□□□□□ -0.52
CXCL12-206ENST00000395795 DCANP1Q8TF63 244 aa11.83□□□□□ -0.52
CXCL12-206ENST00000395795 LINC00476Q8WZB0 136 aa11.83□□□□□ -0.52
CXCL12-206ENST00000395795 IL22RA2Q969J5 263 aa11.83□□□□□ -0.52
CXCL12-206ENST00000395795 AGRNO00468 2067 aa11.83□□□□□ -0.52
CXCL12-206ENST00000395795 NPPCP23582 126 aa11.82□□□□□ -0.52
CXCL12-206ENST00000395795 CMC4P56277 68 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms