RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 C9JCJ5 164 aa14.94□□□□□ -0.02
SIL1-202ENST00000394817 TYMSP04818 313 aa14.94□□□□□ -0.02
SIL1-202ENST00000394817 FAM3BP58499 235 aaPredicted RBP14.94□□□□□ -0.02
SIL1-202ENST00000394817 ITLN2Q8WWU7 325 aaPredicted RBP14.94□□□□□ -0.02
SIL1-202ENST00000394817 SLC25A33Q9BSK2 321 aa14.94□□□□□ -0.02
SIL1-202ENST00000394817 OR7C2O60412 319 aa14.94□□□□□ -0.02
SIL1-202ENST00000394817 LIPFP07098 398 aa14.94□□□□□ -0.02
SIL1-202ENST00000394817 C8orf88P0DMB2 117 aa14.94□□□□□ -0.02
SIL1-202ENST00000394817 RPL27AP46776 148 aaKnown RBP14.94□□□□□ -0.02
SIL1-202ENST00000394817 SSBP2P81877 361 aaPredicted RBP14.94□□□□□ -0.02
SIL1-202ENST00000394817 OR4X1Q8NH49 305 aa14.94□□□□□ -0.02
SIL1-202ENST00000394817 SIGLEC9Q9Y336 463 aa14.94□□□□□ -0.02
SIL1-202ENST00000394817 LY96Q9Y6Y9 160 aa14.94□□□□□ -0.02
SIL1-202ENST00000394817 DCHS2Q6V1P9 2916 aa14.93□□□□□ -0.02
SIL1-202ENST00000394817 IGKV1D-37A0A075B6S9 117 aa14.93□□□□□ -0.02
SIL1-202ENST00000394817 MDFIC2A0A1B0GVS7 189 aa14.93□□□□□ -0.02
SIL1-202ENST00000394817 TCRBV4S1A1TA0A5B7 111 aa14.93□□□□□ -0.02
SIL1-202ENST00000394817 COX7A1P24310 79 aa14.93□□□□□ -0.02
SIL1-202ENST00000394817 CNTFRP26992 372 aa14.93□□□□□ -0.02
SIL1-202ENST00000394817 LCN2P80188 198 aa14.93□□□□□ -0.02
SIL1-202ENST00000394817 PRB3Q04118 309 aaPredicted RBP14.93□□□□□ -0.02
SIL1-202ENST00000394817 NPIPB3Q92617 1050 aa14.93□□□□□ -0.02
SIL1-202ENST00000394817 RPEQ96AT9 228 aa14.93□□□□□ -0.02
SIL1-202ENST00000394817 C22orf46C9J442 243 aa14.92□□□□□ -0.02
SIL1-202ENST00000394817 LY6LH3BQJ8 138 aa14.92□□□□□ -0.02
SIL1-202ENST00000394817 COMPP49747 757 aaPredicted RBP14.92□□□□□ -0.02
SIL1-202ENST00000394817 TNXAQ16473 311 aa14.92□□□□□ -0.02
SIL1-202ENST00000394817 OCC1Q8TAD7 63 aa14.92□□□□□ -0.02
SIL1-202ENST00000394817 TIMD4Q96H15 378 aa14.92□□□□□ -0.02
SIL1-202ENST00000394817 PFDN5Q99471 154 aa14.92□□□□□ -0.02
SIL1-202ENST00000394817 LY6HO94772 140 aa14.92□□□□□ -0.02
SIL1-202ENST00000394817 REG1AP05451 166 aa14.92□□□□□ -0.02
SIL1-202ENST00000394817 CRYGCP07315 174 aa14.92□□□□□ -0.02
SIL1-202ENST00000394817 SELENOTP62341 195 aa14.92□□□□□ -0.02
SIL1-202ENST00000394817 S100A12P80511 92 aa14.92□□□□□ -0.02
SIL1-202ENST00000394817 TEX38Q6PEX7 206 aa14.92□□□□□ -0.02
SIL1-202ENST00000394817 HIST3H2BBQ8N257 126 aa14.92□□□□□ -0.02
SIL1-202ENST00000394817 NEU4Q8WWR8 484 aaPredicted RBP14.92□□□□□ -0.02
SIL1-202ENST00000394817 BTF3L4Q96K17 158 aa14.92□□□□□ -0.02
SIL1-202ENST00000394817 FAM167A-AS1Q96KT0 104 aa14.92□□□□□ -0.02
SIL1-202ENST00000394817 DNAJC4Q9NNZ3 241 aa14.92□□□□□ -0.02
SIL1-202ENST00000394817 MRPL36Q9P0J6 103 aaKnown RBP14.92□□□□□ -0.02
SIL1-202ENST00000394817 ONECUT1Q9UBC0 465 aa14.92□□□□□ -0.02
SIL1-202ENST00000394817 CACNA1BQ00975 2339 aa14.91□□□□□ -0.02
SIL1-202ENST00000394817 SOD3P08294 240 aa14.91□□□□□ -0.02
SIL1-202ENST00000394817 FOXL1Q12952 345 aa14.91□□□□□ -0.02
SIL1-202ENST00000394817 ETFRF1Q6IPR1 90 aa14.91□□□□□ -0.02
SIL1-202ENST00000394817 OR1L4Q8NGR5 311 aa14.91□□□□□ -0.02
SIL1-202ENST00000394817 SLC25A2Q9BXI2 301 aa14.91□□□□□ -0.02
SIL1-202ENST00000394817 GAR1Q9NY12 217 aaKnown RBP14.91□□□□□ -0.02
SIL1-202ENST00000394817 A0A1W2PRE2 83 aa14.9□□□□□ -0.02
SIL1-202ENST00000394817 CLEC12BQ2HXU8 276 aa14.9□□□□□ -0.02
SIL1-202ENST00000394817 PPP1R27Q86WC6 154 aa14.9□□□□□ -0.02
SIL1-202ENST00000394817 RNF5Q99942 180 aa14.9□□□□□ -0.02
SIL1-202ENST00000394817 GGTLC3B5MD39 225 aa14.9□□□□□ -0.02
SIL1-202ENST00000394817 K7EN84 100 aa14.9□□□□□ -0.02
SIL1-202ENST00000394817 COX7A2P2O60397 106 aa14.9□□□□□ -0.02
SIL1-202ENST00000394817 MFAP2P55001 183 aa14.9□□□□□ -0.02
SIL1-202ENST00000394817 BPIFB3P59826 476 aa14.9□□□□□ -0.02
SIL1-202ENST00000394817 PAX2Q02962 417 aa14.9□□□□□ -0.02
SIL1-202ENST00000394817 ZNF90Q03938 601 aa14.9□□□□□ -0.02
SIL1-202ENST00000394817 ACTL10Q5JWF8 245 aa14.9□□□□□ -0.02
SIL1-202ENST00000394817 GFI1BQ5VTD9 330 aa14.9□□□□□ -0.02
SIL1-202ENST00000394817 MORN5Q5VZ52 161 aa14.9□□□□□ -0.02
SIL1-202ENST00000394817 PITPNC1Q9UKF7 332 aa14.9□□□□□ -0.02
SIL1-202ENST00000394817 OR10J4P0C629 311 aa14.89□□□□□ -0.03
SIL1-202ENST00000394817 S100A2P29034 98 aa14.89□□□□□ -0.03
SIL1-202ENST00000394817 HCP5Q6MZN7 132 aa14.89□□□□□ -0.03
SIL1-202ENST00000394817 DTX2Q86UW9 622 aa14.89□□□□□ -0.03
SIL1-202ENST00000394817 OR1P1Q8NH06 330 aa14.89□□□□□ -0.03
SIL1-202ENST00000394817 EAF1Q96JC9 268 aaPredicted RBP14.89□□□□□ -0.03
SIL1-202ENST00000394817 C19orf84I3L1E1 186 aa14.88□□□□□ -0.03
SIL1-202ENST00000394817 CORTO00230 105 aa14.88□□□□□ -0.03
SIL1-202ENST00000394817 IGHV3-48P01763 117 aa14.88□□□□□ -0.03
SIL1-202ENST00000394817 C10orf113Q5VZT2 155 aa14.88□□□□□ -0.03
SIL1-202ENST00000394817 OR11H6Q8NGC7 330 aa14.88□□□□□ -0.03
SIL1-202ENST00000394817 OR10G8Q8NGN5 311 aa14.88□□□□□ -0.03
SIL1-202ENST00000394817 ZFYVE26Q68DK2 2539 aa14.88□□□□□ -0.03
SIL1-202ENST00000394817 A0A1W2PPR1 153 aa14.88□□□□□ -0.03
SIL1-202ENST00000394817 TEX22C9J3V5 150 aa14.88□□□□□ -0.03
SIL1-202ENST00000394817 HNF1AP20823 631 aa14.88□□□□□ -0.03
SIL1-202ENST00000394817 CRYBB3P26998 211 aa14.88□□□□□ -0.03
SIL1-202ENST00000394817 UBE2L3P68036 154 aaKnown RBP14.88□□□□□ -0.03
SIL1-202ENST00000394817 LDLRAD2Q5SZI1 272 aa14.88□□□□□ -0.03
SIL1-202ENST00000394817 TPTE2P1Q5T6R2 138 aa14.88□□□□□ -0.03
SIL1-202ENST00000394817 PATE2Q6UY27 113 aa14.88□□□□□ -0.03
SIL1-202ENST00000394817 OR5AU1Q8NGC0 362 aa14.88□□□□□ -0.03
SIL1-202ENST00000394817 SGMS2Q8NHU3 365 aa14.88□□□□□ -0.03
SIL1-202ENST00000394817 MISP3Q96FF7 219 aa14.88□□□□□ -0.03
SIL1-202ENST00000394817 GPR61Q9BZJ8 451 aa14.88□□□□□ -0.03
SIL1-202ENST00000394817 NIT2Q9NQR4 276 aa14.88□□□□□ -0.03
SIL1-202ENST00000394817 ZNF355PQ9NSJ1 428 aa14.88□□□□□ -0.03
SIL1-202ENST00000394817 ARHGAP32A7KAX9 2087 aa14.88□□□□□ -0.03
SIL1-202ENST00000394817 M0R1W7 72 aa14.87□□□□□ -0.03
SIL1-202ENST00000394817 SSX2Q16385 188 aa14.87□□□□□ -0.03
SIL1-202ENST00000394817 TMEM116Q8NCL8 245 aa14.87□□□□□ -0.03
SIL1-202ENST00000394817 C22orf15Q8WYQ4 148 aa14.87□□□□□ -0.03
SIL1-202ENST00000394817 TRGV9Q99603 122 aa14.87□□□□□ -0.03
SIL1-202ENST00000394817 SSBP3Q9BWW4 388 aaPredicted RBP14.87□□□□□ -0.03
SIL1-202ENST00000394817 FBXL15Q9H469 300 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms