RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 GBGT1Q8N5D6 347 aa13.53□□□□□ -0.24
SNX9-201ENST00000392185 CACNG8Q8WXS5 425 aa13.53□□□□□ -0.24
SNX9-201ENST00000392185 EPG5Q9HCE0 2579 aa13.53□□□□□ -0.24
SNX9-201ENST00000392185 IGHV1-3A0A0C4DH29 117 aa13.53□□□□□ -0.24
SNX9-201ENST00000392185 CD81P60033 236 aa13.53□□□□□ -0.24
SNX9-201ENST00000392185 ICAM4Q14773 271 aa13.53□□□□□ -0.24
SNX9-201ENST00000392185 VMO1Q7Z5L0 202 aa13.53□□□□□ -0.24
SNX9-201ENST00000392185 WDR83OSQ9Y284 106 aa13.53□□□□□ -0.24
SNX9-201ENST00000392185 SRP19P09132 144 aaKnown RBP13.53□□□□□ -0.24
SNX9-201ENST00000392185 CD69Q07108 199 aa13.53□□□□□ -0.24
SNX9-201ENST00000392185 CLEC19AQ6UXS0 136 aa13.53□□□□□ -0.24
SNX9-201ENST00000392185 MAPK1IP1LQ8NDC0 245 aa13.53□□□□□ -0.24
SNX9-201ENST00000392185 HIVEP2P31629 2446 aa13.52□□□□□ -0.24
SNX9-201ENST00000392185 RPL7P18124 248 aaKnown RBP13.52□□□□□ -0.24
SNX9-201ENST00000392185 SLC25A48Q6ZT89 311 aaKnown RBP13.52□□□□□ -0.24
SNX9-201ENST00000392185 NPPCP23582 126 aa13.52□□□□□ -0.25
SNX9-201ENST00000392185 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.52□□□□□ -0.25
SNX9-201ENST00000392185 SH2D7A6NKC9 451 aaPredicted RBP13.52□□□□□ -0.25
SNX9-201ENST00000392185 MLANAQ16655 118 aa13.52□□□□□ -0.25
SNX9-201ENST00000392185 TGIF2-C20orf24A0A0A6YYL0 155 aa13.51□□□□□ -0.25
SNX9-201ENST00000392185 OR2T8A6NH00 312 aa13.51□□□□□ -0.25
SNX9-201ENST00000392185 ZNF738Q8NE65 137 aa13.51□□□□□ -0.25
SNX9-201ENST00000392185 DUX5Q96PT3 197 aa13.51□□□□□ -0.25
SNX9-201ENST00000392185 GATA4P43694 442 aa13.51□□□□□ -0.25
SNX9-201ENST00000392185 RNASEH2CQ8TDP1 164 aaKnown RBP13.51□□□□□ -0.25
SNX9-201ENST00000392185 JMJD1CQ15652 2540 aa13.51□□□□□ -0.25
SNX9-201ENST00000392185 SCO2A0A1W2PP80 73 aa13.51□□□□□ -0.25
SNX9-201ENST00000392185 TMEM250H0YL14 139 aa13.51□□□□□ -0.25
SNX9-201ENST00000392185 PAFAH1B2P68402 229 aa13.51□□□□□ -0.25
SNX9-201ENST00000392185 WDR73Q6P4I2 378 aa13.51□□□□□ -0.25
SNX9-201ENST00000392185 TEX45Q8NA69 505 aa13.51□□□□□ -0.25
SNX9-201ENST00000392185 EEF1AKMT3Q96AZ1 226 aa13.51□□□□□ -0.25
SNX9-201ENST00000392185 BET1LQ9NYM9 111 aa13.51□□□□□ -0.25
SNX9-201ENST00000392185 H0YJW9 148 aa13.5□□□□□ -0.25
SNX9-201ENST00000392185 RELBQ01201 579 aa13.5□□□□□ -0.25
SNX9-201ENST00000392185 CENPWQ5EE01 88 aa13.5□□□□□ -0.25
SNX9-201ENST00000392185 TMEM78Q5T7P6 136 aa13.5□□□□□ -0.25
SNX9-201ENST00000392185 TREML4Q6UXN2 200 aa13.5□□□□□ -0.25
SNX9-201ENST00000392185 TOMM20LQ6UXN7 152 aa13.5□□□□□ -0.25
SNX9-201ENST00000392185 C19orf24Q9BVV8 132 aa13.5□□□□□ -0.25
SNX9-201ENST00000392185 ANAPC10Q9UM13 185 aa13.5□□□□□ -0.25
SNX9-201ENST00000392185 PRSS8Q16651 343 aa13.5□□□□□ -0.25
SNX9-201ENST00000392185 TNFRSF14Q92956 283 aa13.5□□□□□ -0.25
SNX9-201ENST00000392185 C11orf53Q8IXP5 236 aa13.5□□□□□ -0.25
SNX9-201ENST00000392185 OR4B1Q8NGF8 309 aa13.5□□□□□ -0.25
SNX9-201ENST00000392185 OR52E5Q8NH55 327 aa13.5□□□□□ -0.25
SNX9-201ENST00000392185 CLDND2Q8NHS1 167 aa13.5□□□□□ -0.25
SNX9-201ENST00000392185 ARL2-SNX15V9GYD0 113 aa13.5□□□□□ -0.25
SNX9-201ENST00000392185 A8MWL6 223 aa13.5□□□□□ -0.25
SNX9-201ENST00000392185 TMEM50AO95807 157 aa13.5□□□□□ -0.25
SNX9-201ENST00000392185 PYYP10082 97 aa13.5□□□□□ -0.25
SNX9-201ENST00000392185 TM4SF20Q53R12 229 aa13.5□□□□□ -0.25
SNX9-201ENST00000392185 LYPD6Q86Y78 171 aa13.5□□□□□ -0.25
SNX9-201ENST00000392185 IFT22Q9H7X7 185 aa13.5□□□□□ -0.25
SNX9-201ENST00000392185 NAV3Q8IVL0 2385 aa13.49□□□□□ -0.25
SNX9-201ENST00000392185 KIAA1644Q3SXP7 199 aa13.49□□□□□ -0.25
SNX9-201ENST00000392185 FAM106AQ4KMX7 169 aa13.49□□□□□ -0.25
SNX9-201ENST00000392185 TMEM177Q53S58 311 aa13.49□□□□□ -0.25
SNX9-201ENST00000392185 MRPL32Q9BYC8 188 aaKnown RBP13.49□□□□□ -0.25
SNX9-201ENST00000392185 GSX1Q9H4S2 264 aaPredicted RBP13.49□□□□□ -0.25
SNX9-201ENST00000392185 FGF16O43320 207 aa13.49□□□□□ -0.25
SNX9-201ENST00000392185 IGKV3-20P01619 116 aa13.49□□□□□ -0.25
SNX9-201ENST00000392185 PRB1P04280 392 aa13.49□□□□□ -0.25
SNX9-201ENST00000392185 AGAP20933 346 aa13.49□□□□□ -0.25
SNX9-201ENST00000392185 TPTE2P1Q5T6R2 138 aa13.49□□□□□ -0.25
SNX9-201ENST00000392185 TMEM14EPQ6UXP3 125 aa13.49□□□□□ -0.25
SNX9-201ENST00000392185 RPP25LQ8N5L8 163 aaKnown RBP13.49□□□□□ -0.25
SNX9-201ENST00000392185 BUB1B-PAK6H3BSN5 160 aa13.48□□□□□ -0.25
SNX9-201ENST00000392185 SOD3P08294 240 aa13.48□□□□□ -0.25
SNX9-201ENST00000392185 LOXP28300 417 aaPredicted RBP13.48□□□□□ -0.25
SNX9-201ENST00000392185 SELENOKQ9Y6D0 94 aa13.48□□□□□ -0.25
SNX9-201ENST00000392185 PGPEP1LA6NFU8 196 aa13.48□□□□□ -0.25
SNX9-201ENST00000392185 ZNF134P52741 427 aa13.48□□□□□ -0.25
SNX9-201ENST00000392185 Q8NA96 180 aa13.48□□□□□ -0.25
SNX9-201ENST00000392185 GGTLC1Q9BX51 225 aa13.48□□□□□ -0.25
SNX9-201ENST00000392185 A0A1W2PS18 150 aa13.47□□□□□ -0.25
SNX9-201ENST00000392185 RHOGP84095 191 aa13.47□□□□□ -0.25
SNX9-201ENST00000392185 SSC4DQ8WTU2 575 aa13.47□□□□□ -0.25
SNX9-201ENST00000392185 SLC17A3O00476 420 aa13.47□□□□□ -0.25
SNX9-201ENST00000392185 IGKV1-39P01597 117 aa13.47□□□□□ -0.25
SNX9-201ENST00000392185 IGKV1D-39P04432 117 aa13.47□□□□□ -0.25
SNX9-201ENST00000392185 TMEM155Q4W5P6 130 aa13.47□□□□□ -0.25
SNX9-201ENST00000392185 FAM162BQ5T6X4 162 aa13.47□□□□□ -0.25
SNX9-201ENST00000392185 C11orf42Q8N5U0 333 aa13.47□□□□□ -0.25
SNX9-201ENST00000392185 C11orf44Q8N8P7 122 aa13.47□□□□□ -0.25
SNX9-201ENST00000392185 CFHR2P36980 270 aa13.47□□□□□ -0.25
SNX9-201ENST00000392185 RIGQ13278 110 aa13.47□□□□□ -0.25
SNX9-201ENST00000392185 EFNB3Q15768 340 aa13.47□□□□□ -0.25
SNX9-201ENST00000392185 C17orf58Q2M2W7 97 aa13.47□□□□□ -0.25
SNX9-201ENST00000392185 YAE1D1Q9NRH1 226 aa13.47□□□□□ -0.25
SNX9-201ENST00000392185 TRAV5A0A0B4J249 113 aa13.46□□□□□ -0.25
SNX9-201ENST00000392185 DLX6P56179 175 aa13.46□□□□□ -0.25
SNX9-201ENST00000392185 SEC14L6B5MCN3 397 aa13.46□□□□□ -0.25
SNX9-201ENST00000392185 AREGP15514 252 aa13.46□□□□□ -0.25
SNX9-201ENST00000392185 GPX4P36969 197 aaPredicted RBP13.46□□□□□ -0.25
SNX9-201ENST00000392185 C15orf62A8K5M9 175 aa13.46□□□□□ -0.25
SNX9-201ENST00000392185 C3orf36Q3SXR2 165 aa13.46□□□□□ -0.25
SNX9-201ENST00000392185 SPANXN1Q5VSR9 72 aa13.46□□□□□ -0.26
SNX9-201ENST00000392185 TMEM167AQ8TBQ9 72 aa13.46□□□□□ -0.26
SNX9-201ENST00000392185 Q8TCH9 128 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms