RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 TSPAN32Q96QS1 320 aa0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 TMEM147Q9BVK8 224 aa0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 TAS2R4Q9NYW5 299 aa0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 SBF1O95248 1867 aa0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 DOCK5Q9H7D0 1870 aa0.32□□□□□ -2.36
RNU6-440P-201ENST00000390882 NCOA1Q15788 1441 aa0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 ROS1P08922 2347 aa0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 TGIF2-C20orf24A0A0A6YYL0 155 aa0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 BUB1B-PAK6H3BSN5 160 aa0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 FAAHO00519 579 aa0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 PIRO00625 290 aa0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 CHP2O43745 196 aa0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 PROSCO94903 275 aa0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 UBL3O95164 117 aa0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 AHSA1O95433 338 aa0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 CRYZL1O95825 349 aa0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 IFNA16P05015 189 aa0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 SERPINA6P08185 405 aa0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 S100A4P26447 101 aaKnown RBP0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 ZNF93P35789 620 aaPredicted RBP0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 SSR2P43308 183 aa0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 IMPG1Q17R60 797 aa0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 ACOT6Q3I5F7 207 aaPredicted RBP0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 SFT2D1Q8WV19 159 aa0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 GPR146Q96CH1 333 aa0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 DCUN1D1Q96GG9 259 aa0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 C20orf27Q9GZN8 174 aa0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 RASL12Q9NYN1 266 aa0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 HS3ST2Q9Y278 367 aa0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 PKIGQ9Y2B9 76 aa0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 ZFP30Q9Y2G7 519 aa0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 MED1Q15648 1581 aaPredicted RBP0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 LAMA4Q16363 1823 aa0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 TAF1LQ8IZX4 1826 aa0.31□□□□□ -2.36
RNU6-440P-201ENST00000390882 E9PCH4 1651 aa0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 PIK3C2GO75747 1445 aa0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 EXPH5Q8NEV8 1989 aa0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 POLEQ07864 2286 aa0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 TRBV6-8A0A0A6YYG3 113 aa0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 TRAV12-1A0A0B4J245 112 aa0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 TRAV26-2A0A0B4J265 109 aa0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 CLDN24A6NM45 220 aa0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 M0R2N4 97 aa0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 SULT1B1O43704 296 aa0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 OR2J2O76002 312 aa0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 RBP1P09455 135 aa0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 SMIM10L2AP0DMW4 78 aa0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 SMIM10L2BP0DMW5 78 aa0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 MGST1P10620 155 aaKnown RBP0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 RPS20P60866 119 aaKnown RBP0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 YPEL3P61236 119 aaPredicted RBP0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 RNASE10Q5GAN6 216 aaKnown RBP0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 GDF5OSQ5U4N7 250 aa0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 PTRHD1Q6GMV3 140 aaKnown RBP0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 TRAPPC6BQ86SZ2 158 aa0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 KRT222Q8N1A0 295 aa0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 CLDN22Q8N7P3 220 aa0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 Q8N814 137 aa0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 OR10J5Q8NHC4 309 aa0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 PPP1R2P1Q96PQ5 205 aa0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 CMSS1Q9BQ75 279 aaKnown RBP0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 OR51V1Q9H2C8 321 aa0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 OSTCQ9NRP0 149 aa0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 NHP2Q9NX24 153 aaKnown RBP0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 MRPL27Q9P0M9 148 aaKnown RBP0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 VPS29Q9UBQ0 182 aa0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 SLC35A3Q9Y2D2 325 aa0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 DENND4CQ5VZ89 1909 aa0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 MCM3APO60318 1980 aa0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 ROBO3Q96MS0 1386 aa0.3□□□□□ -2.36
RNU6-440P-201ENST00000390882 ARFGEF3Q5TH69 2177 aa0.29□□□□□ -2.36
RNU6-440P-201ENST00000390882 AHNAKQ09666 5890 aaKnown RBP0.29□□□□□ -2.36
RNU6-440P-201ENST00000390882 C7orf71A4D174 169 aa0.29□□□□□ -2.36
RNU6-440P-201ENST00000390882 OR4C46A6NHA9 309 aa0.29□□□□□ -2.36
RNU6-440P-201ENST00000390882 INE1O15225 51 aa0.29□□□□□ -2.36
RNU6-440P-201ENST00000390882 LYZL6O75951 148 aa0.29□□□□□ -2.36
RNU6-440P-201ENST00000390882 TTRP02766 147 aa0.29□□□□□ -2.36
RNU6-440P-201ENST00000390882 OMPP47874 163 aa0.29□□□□□ -2.36
RNU6-440P-201ENST00000390882 CEBPGP53567 150 aa0.29□□□□□ -2.36
RNU6-440P-201ENST00000390882 DEFA1P59665 94 aa0.29□□□□□ -2.36
RNU6-440P-201ENST00000390882 LINC01554Q52M75 96 aa0.29□□□□□ -2.36
RNU6-440P-201ENST00000390882 C1orf137Q5JT78 98 aa0.29□□□□□ -2.36
RNU6-440P-201ENST00000390882 OR6V1Q8N148 313 aa0.29□□□□□ -2.36
RNU6-440P-201ENST00000390882 C3orf56Q8N813 242 aa0.29□□□□□ -2.36
RNU6-440P-201ENST00000390882 GDPD1Q8N9F7 314 aa0.29□□□□□ -2.36
RNU6-440P-201ENST00000390882 LINC00301Q8NCQ3 95 aa0.29□□□□□ -2.36
RNU6-440P-201ENST00000390882 OR13D1Q8NGV5 346 aa0.29□□□□□ -2.36
RNU6-440P-201ENST00000390882 C4orf3Q8WVX3 66 aa0.29□□□□□ -2.36
RNU6-440P-201ENST00000390882 ITFG2Q969R8 447 aa0.29□□□□□ -2.36
RNU6-440P-201ENST00000390882 C8orf76Q96K31 380 aa0.29□□□□□ -2.36
RNU6-440P-201ENST00000390882 CCDC42Q96M95 316 aa0.29□□□□□ -2.36
RNU6-440P-201ENST00000390882 CCDC90BQ9GZT6 254 aa0.29□□□□□ -2.36
RNU6-440P-201ENST00000390882 DCSTAMPQ9H295 470 aa0.29□□□□□ -2.36
RNU6-440P-201ENST00000390882 EPDR1Q9UM22 224 aa0.29□□□□□ -2.36
RNU6-440P-201ENST00000390882 CYSLTR1Q9Y271 337 aa0.29□□□□□ -2.36
RNU6-440P-201ENST00000390882 NOSIPQ9Y314 301 aaKnown RBP0.29□□□□□ -2.36
RNU6-440P-201ENST00000390882 RTL1A6NKG5 1358 aa0.29□□□□□ -2.36
RNU6-440P-201ENST00000390882 TECTAO75443 2155 aa0.29□□□□□ -2.36
RNU6-440P-201ENST00000390882 CEP192Q8TEP8 1941 aa0.28□□□□□ -2.36
RNU6-440P-201ENST00000390882 A0A087X0T9 212 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms