RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 CRIM1Q9NZV1 1036 aa14.25□□□□□ -0.13
COL4A3BP-203ENST00000380494 MUC21A0A0G2JKD1 596 aa14.25□□□□□ -0.13
COL4A3BP-203ENST00000380494 TRBV7-9A0A0J9YWB2 115 aa14.25□□□□□ -0.13
COL4A3BP-203ENST00000380494 MUC21A0A140T8X8 626 aa14.25□□□□□ -0.13
COL4A3BP-203ENST00000380494 B9A039 149 aa14.25□□□□□ -0.13
COL4A3BP-203ENST00000380494 MUC21Q5SSG8 566 aa14.25□□□□□ -0.13
COL4A3BP-203ENST00000380494 TIMP4Q99727 224 aa14.25□□□□□ -0.13
COL4A3BP-203ENST00000380494 GGTLC1Q9BX51 225 aa14.25□□□□□ -0.13
COL4A3BP-203ENST00000380494 PLNP26678 52 aa14.24□□□□□ -0.13
COL4A3BP-203ENST00000380494 GAGE1Q13065 139 aa14.24□□□□□ -0.13
COL4A3BP-203ENST00000380494 KIR3DL3Q8N743 410 aa14.24□□□□□ -0.13
COL4A3BP-203ENST00000380494 C8orf46Q8TAG6 207 aa14.24□□□□□ -0.13
COL4A3BP-203ENST00000380494 SAP25Q8TEE9 199 aa14.24□□□□□ -0.13
COL4A3BP-203ENST00000380494 ARPC1AQ92747 370 aa14.24□□□□□ -0.13
COL4A3BP-203ENST00000380494 GREB1LQ9C091 1923 aaPredicted RBP14.24□□□□□ -0.13
COL4A3BP-203ENST00000380494 GAGE12BA1L429 117 aa14.24□□□□□ -0.13
COL4A3BP-203ENST00000380494 Q0VG73 95 aa14.24□□□□□ -0.13
COL4A3BP-203ENST00000380494 C10orf91Q5T1B1 145 aa14.24□□□□□ -0.13
COL4A3BP-203ENST00000380494 TMEM14EPQ6UXP3 125 aa14.24□□□□□ -0.13
COL4A3BP-203ENST00000380494 BCL6BQ8N143 479 aaPredicted RBP14.24□□□□□ -0.13
COL4A3BP-203ENST00000380494 FBXL15Q9H469 300 aa14.24□□□□□ -0.13
COL4A3BP-203ENST00000380494 UBR3Q6ZT12 1888 aa14.24□□□□□ -0.13
COL4A3BP-203ENST00000380494 SYS1-DBNDD2H3BUS1 97 aa14.24□□□□□ -0.13
COL4A3BP-203ENST00000380494 PYYP10082 97 aa14.24□□□□□ -0.13
COL4A3BP-203ENST00000380494 TMPRSS3P57727 454 aa14.24□□□□□ -0.13
COL4A3BP-203ENST00000380494 RHOGP84095 191 aa14.24□□□□□ -0.13
COL4A3BP-203ENST00000380494 LAGE3Q14657 143 aa14.24□□□□□ -0.13
COL4A3BP-203ENST00000380494 GUSBP1Q15486 140 aa14.24□□□□□ -0.13
COL4A3BP-203ENST00000380494 MPV17L2Q567V2 206 aa14.24□□□□□ -0.13
COL4A3BP-203ENST00000380494 CDCP2Q5VXM1 449 aa14.24□□□□□ -0.13
COL4A3BP-203ENST00000380494 ERG28Q9UKR5 140 aa14.24□□□□□ -0.13
COL4A3BP-203ENST00000380494 PSG1P11464 419 aa14.24□□□□□ -0.13
COL4A3BP-203ENST00000380494 A0A0G2JMZ2 1700 aa14.24□□□□□ -0.13
COL4A3BP-203ENST00000380494 LRRC37A2A6NM11 1700 aa14.24□□□□□ -0.13
COL4A3BP-203ENST00000380494 DUTP33316 252 aaKnown RBP14.24□□□□□ -0.13
COL4A3BP-203ENST00000380494 RSPO4Q2I0M5 234 aaPredicted RBP14.24□□□□□ -0.13
COL4A3BP-203ENST00000380494 SHANK3Q9BYB0 1731 aa14.23□□□□□ -0.13
COL4A3BP-203ENST00000380494 DLX4Q92988 240 aaPredicted RBP14.23□□□□□ -0.13
COL4A3BP-203ENST00000380494 DPM3Q9P2X0 92 aa14.23□□□□□ -0.13
COL4A3BP-203ENST00000380494 POLR3KQ9Y2Y1 108 aaPredicted RBP14.23□□□□□ -0.13
COL4A3BP-203ENST00000380494 CFPP27918 469 aa14.23□□□□□ -0.13
COL4A3BP-203ENST00000380494 CCL21O00585 134 aa14.23□□□□□ -0.13
COL4A3BP-203ENST00000380494 RNF115Q9Y4L5 304 aa14.23□□□□□ -0.13
COL4A3BP-203ENST00000380494 MST1LQ2TV78 715 aa14.22□□□□□ -0.13
COL4A3BP-203ENST00000380494 TRAV5A0A0B4J249 113 aa14.22□□□□□ -0.13
COL4A3BP-203ENST00000380494 A0A0G2JMM0 328 aa14.22□□□□□ -0.13
COL4A3BP-203ENST00000380494 A0A1W2PPB8 328 aa14.22□□□□□ -0.13
COL4A3BP-203ENST00000380494 KIR3DP1A8MWS1 328 aa14.22□□□□□ -0.13
COL4A3BP-203ENST00000380494 KLF17Q5JT82 389 aaPredicted RBP14.22□□□□□ -0.13
COL4A3BP-203ENST00000380494 RPP25LQ8N5L8 163 aaKnown RBP14.22□□□□□ -0.13
COL4A3BP-203ENST00000380494 RNF125Q96EQ8 232 aa14.22□□□□□ -0.13
COL4A3BP-203ENST00000380494 PARP14Q460N5 1801 aa14.22□□□□□ -0.13
COL4A3BP-203ENST00000380494 FAM90A2PQ658T7 463 aa14.22□□□□□ -0.13
COL4A3BP-203ENST00000380494 TMEM238C9JI98 176 aa14.21□□□□□ -0.13
COL4A3BP-203ENST00000380494 CECR9P0C854 216 aa14.21□□□□□ -0.13
COL4A3BP-203ENST00000380494 PSG7Q13046 419 aa14.21□□□□□ -0.13
COL4A3BP-203ENST00000380494 KIR3DS1Q14943 382 aa14.21□□□□□ -0.13
COL4A3BP-203ENST00000380494 PATJQ8NI35 1801 aa14.21□□□□□ -0.13
COL4A3BP-203ENST00000380494 RNASE4P34096 147 aaKnown RBP14.21□□□□□ -0.13
COL4A3BP-203ENST00000380494 TRAV2A0A0B4J234 112 aa14.21□□□□□ -0.13
COL4A3BP-203ENST00000380494 PATE3B3GLJ2 98 aa14.21□□□□□ -0.13
COL4A3BP-203ENST00000380494 CRYGSP22914 178 aa14.21□□□□□ -0.13
COL4A3BP-203ENST00000380494 CLEC2AQ6UVW9 174 aa14.21□□□□□ -0.13
COL4A3BP-203ENST00000380494 PPP1R27Q86WC6 154 aa14.21□□□□□ -0.13
COL4A3BP-203ENST00000380494 SLC25A15Q9Y619 301 aa14.21□□□□□ -0.13
COL4A3BP-203ENST00000380494 PSMB11A5LHX3 300 aa14.21□□□□□ -0.14
COL4A3BP-203ENST00000380494 TRAV21A0A0B4J279 112 aa14.2□□□□□ -0.14
COL4A3BP-203ENST00000380494 IGHV2OR16-5A0A0B4J2B6 119 aa14.2□□□□□ -0.14
COL4A3BP-203ENST00000380494 TRGV3P03979 118 aa14.2□□□□□ -0.14
COL4A3BP-203ENST00000380494 OCIAD2Q56VL3 154 aa14.2□□□□□ -0.14
COL4A3BP-203ENST00000380494 PPP1R32Q7Z5V6 425 aa14.2□□□□□ -0.14
COL4A3BP-203ENST00000380494 SLC25A39Q9BZJ4 359 aaPredicted RBP14.2□□□□□ -0.14
COL4A3BP-203ENST00000380494 IGHV3OR16-12A0A075B7B8 117 aa14.2□□□□□ -0.14
COL4A3BP-203ENST00000380494 A0A1W2PR77 199 aa14.2□□□□□ -0.14
COL4A3BP-203ENST00000380494 hDV102S1A0JD36 115 aa14.2□□□□□ -0.14
COL4A3BP-203ENST00000380494 RFPL3SP0C7P2 107 aa14.2□□□□□ -0.14
COL4A3BP-203ENST00000380494 QRFPP83859 136 aa14.2□□□□□ -0.14
COL4A3BP-203ENST00000380494 SRSF6Q13247 344 aaKnown RBP14.2□□□□□ -0.14
COL4A3BP-203ENST00000380494 MGST2Q99735 147 aa14.2□□□□□ -0.14
COL4A3BP-203ENST00000380494 SBF2Q86WG5 1849 aa14.2□□□□□ -0.14
COL4A3BP-203ENST00000380494 A0A087X0K7 114 aa14.2□□□□□ -0.14
COL4A3BP-203ENST00000380494 PIMREGQ9BSJ6 248 aa14.2□□□□□ -0.14
COL4A3BP-203ENST00000380494 ZNF319Q9P2F9 582 aa14.2□□□□□ -0.14
COL4A3BP-203ENST00000380494 FAM71F2Q6NXP2 309 aa14.19□□□□□ -0.14
COL4A3BP-203ENST00000380494 IGKV1D-33P01593 117 aa14.19□□□□□ -0.14
COL4A3BP-203ENST00000380494 IGKV1-33P01594 117 aa14.19□□□□□ -0.14
COL4A3BP-203ENST00000380494 IGHV3-23P01764 117 aa14.19□□□□□ -0.14
COL4A3BP-203ENST00000380494 NUP35Q8NFH5 326 aa14.19□□□□□ -0.14
COL4A3BP-203ENST00000380494 DCTN5Q9BTE1 182 aa14.19□□□□□ -0.14
COL4A3BP-203ENST00000380494 TRBV6-6A0A0A6YYG2 114 aa14.19□□□□□ -0.14
COL4A3BP-203ENST00000380494 Q6ZS49 121 aa14.19□□□□□ -0.14
COL4A3BP-203ENST00000380494 GTSF1LQ9H1H1 148 aa14.19□□□□□ -0.14
COL4A3BP-203ENST00000380494 CCDC88CQ9P219 2028 aa14.19□□□□□ -0.14
COL4A3BP-203ENST00000380494 THSD7AQ9UPZ6 1657 aa14.19□□□□□ -0.14
COL4A3BP-203ENST00000380494 M0R2P5 195 aa14.19□□□□□ -0.14
COL4A3BP-203ENST00000380494 FAM216BQ8N7L0 139 aa14.19□□□□□ -0.14
COL4A3BP-203ENST00000380494 ZNF837Q96EG3 531 aaPredicted RBP14.19□□□□□ -0.14
COL4A3BP-203ENST00000380494 GFRA4Q9GZZ7 299 aa14.19□□□□□ -0.14
COL4A3BP-203ENST00000380494 FAM57AQ8TBR7 257 aa14.18□□□□□ -0.14
COL4A3BP-203ENST00000380494 SNHG12Q9BXW3 62 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms