RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 GNG12Q9UBI6 72 aa9.97□□□□□ -0.81
VRK3-202ENST00000377011 SLC25A10Q9UBX3 287 aaPredicted RBP9.97□□□□□ -0.81
VRK3-202ENST00000377011 A0A1W2PRD5 423 aa9.96□□□□□ -0.81
VRK3-202ENST00000377011 A0A1W2PRF3 423 aa9.96□□□□□ -0.81
VRK3-202ENST00000377011 A0A1W2PRM7 423 aa9.96□□□□□ -0.81
VRK3-202ENST00000377011 OR9G9P0C7N8 305 aa9.96□□□□□ -0.81
VRK3-202ENST00000377011 NDUFB7P17568 137 aa9.96□□□□□ -0.81
VRK3-202ENST00000377011 DDTP30046 118 aa9.96□□□□□ -0.81
VRK3-202ENST00000377011 VDAC2P45880 294 aaPredicted RBP9.96□□□□□ -0.81
VRK3-202ENST00000377011 HILS1P60008 231 aa9.96□□□□□ -0.81
VRK3-202ENST00000377011 PRAMEF5Q5TYX0 476 aa9.96□□□□□ -0.81
VRK3-202ENST00000377011 KCNIP4Q6PIL6 250 aa9.96□□□□□ -0.81
VRK3-202ENST00000377011 C11orf94C9JXX5 98 aa9.96□□□□□ -0.82
VRK3-202ENST00000377011 PRSS46E5RG02 174 aa9.96□□□□□ -0.82
VRK3-202ENST00000377011 FNDC10F2Z333 226 aa9.96□□□□□ -0.82
VRK3-202ENST00000377011 PAGE4O60829 102 aa9.96□□□□□ -0.82
VRK3-202ENST00000377011 TOX4O94842 621 aa9.96□□□□□ -0.82
VRK3-202ENST00000377011 PPIAL4GP0DN37 164 aa9.96□□□□□ -0.82
VRK3-202ENST00000377011 GAMTQ14353 236 aa9.96□□□□□ -0.82
VRK3-202ENST00000377011 DEFB112Q30KQ8 113 aa9.96□□□□□ -0.82
VRK3-202ENST00000377011 VMO1Q7Z5L0 202 aa9.96□□□□□ -0.82
VRK3-202ENST00000377011 C11orf42Q8N5U0 333 aa9.96□□□□□ -0.82
VRK3-202ENST00000377011 OR2T10Q8NGZ9 312 aa9.96□□□□□ -0.82
VRK3-202ENST00000377011 OR4S2Q8NH73 311 aa9.96□□□□□ -0.82
VRK3-202ENST00000377011 TNFRSF14Q92956 283 aa9.96□□□□□ -0.82
VRK3-202ENST00000377011 C14orf144Q96I85 54 aa9.96□□□□□ -0.82
VRK3-202ENST00000377011 ADTRPQ96IZ2 230 aa9.96□□□□□ -0.82
VRK3-202ENST00000377011 ONECUT1Q9UBC0 465 aa9.96□□□□□ -0.82
VRK3-202ENST00000377011 TRRAPQ9Y4A5 3859 aa9.95□□□□□ -0.82
VRK3-202ENST00000377011 IGHV3-43A0A0B4J1X8 118 aa9.95□□□□□ -0.82
VRK3-202ENST00000377011 M0R1X1 148 aa9.95□□□□□ -0.82
VRK3-202ENST00000377011 FCGR3BO75015 233 aa9.95□□□□□ -0.82
VRK3-202ENST00000377011 CGB3P0DN86 165 aa9.95□□□□□ -0.82
VRK3-202ENST00000377011 CGB7P0DN87 165 aa9.95□□□□□ -0.82
VRK3-202ENST00000377011 IGHV3-43DP0DP04 118 aa9.95□□□□□ -0.82
VRK3-202ENST00000377011 LOXL3P58215 753 aa9.95□□□□□ -0.82
VRK3-202ENST00000377011 LRRC10Q5BKY1 277 aa9.95□□□□□ -0.82
VRK3-202ENST00000377011 PDZD11Q5EBL8 140 aa9.95□□□□□ -0.82
VRK3-202ENST00000377011 HCP5Q6MZN7 132 aa9.95□□□□□ -0.82
VRK3-202ENST00000377011 FAM53AQ6NSI3 398 aaPredicted RBP9.95□□□□□ -0.82
VRK3-202ENST00000377011 TCF23Q7RTU1 214 aa9.95□□□□□ -0.82
VRK3-202ENST00000377011 TPRX1Q8N7U7 411 aa9.95□□□□□ -0.82
VRK3-202ENST00000377011 DDB2Q92466 427 aa9.95□□□□□ -0.82
VRK3-202ENST00000377011 S1PR3Q99500 378 aa9.95□□□□□ -0.82
VRK3-202ENST00000377011 IFI27L2Q9H2X8 130 aa9.95□□□□□ -0.82
VRK3-202ENST00000377011 KIAA2026Q5HYC2 2103 aa9.95□□□□□ -0.82
VRK3-202ENST00000377011 A0A1W2PPV4 95 aa9.94□□□□□ -0.82
VRK3-202ENST00000377011 NKX6-3A6NJ46 265 aa9.94□□□□□ -0.82
VRK3-202ENST00000377011 PROP1O75360 226 aa9.94□□□□□ -0.82
VRK3-202ENST00000377011 CCL3L1P16619 93 aa9.94□□□□□ -0.82
VRK3-202ENST00000377011 THBS3P49746 956 aa9.94□□□□□ -0.82
VRK3-202ENST00000377011 ATP5IP56385 69 aaPredicted RBP9.94□□□□□ -0.82
VRK3-202ENST00000377011 RELBQ01201 579 aa9.94□□□□□ -0.82
VRK3-202ENST00000377011 EDDM3AQ14507 147 aa9.94□□□□□ -0.82
VRK3-202ENST00000377011 POU2AF1Q16633 256 aa9.94□□□□□ -0.82
VRK3-202ENST00000377011 ACTL10Q5JWF8 245 aa9.94□□□□□ -0.82
VRK3-202ENST00000377011 RFESDQ8TAC1 157 aa9.94□□□□□ -0.82
VRK3-202ENST00000377011 C8orf46Q8TAG6 207 aa9.94□□□□□ -0.82
VRK3-202ENST00000377011 TMEM158Q8WZ71 300 aa9.94□□□□□ -0.82
VRK3-202ENST00000377011 CALYQ9NYX4 217 aa9.94□□□□□ -0.82
VRK3-202ENST00000377011 FOXA2Q9Y261 457 aaPredicted RBP9.94□□□□□ -0.82
VRK3-202ENST00000377011 ARL2-SNX15V9GYD0 113 aa9.94□□□□□ -0.82
VRK3-202ENST00000377011 A0A087X0M5 115 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 A0A1B0GX30 115 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 XKRY2A2RUG3 117 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 DNAJC9-AS1A6NH13 148 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 C15orf61A6NNL5 157 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 CXorf1O96002 111 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 AMBPP02760 352 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 STAG3L2P0CL84 134 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 STAG3L3P0CL85 134 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 TMEM200BQ69YZ2 307 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 CDPF1Q6NVV7 123 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 TREML4Q6UXN2 200 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 SSX9Q7RTT3 188 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 BEND2Q8NDZ0 799 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 TMEM18Q96B42 140 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 HEYLQ9NQ87 328 aaPredicted RBP9.93□□□□□ -0.82
VRK3-202ENST00000377011 TNFRSF19Q9NS68 423 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 A0A0U1RQK1 487 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 HMGB3O15347 200 aaKnown RBP9.93□□□□□ -0.82
VRK3-202ENST00000377011 RD3LP0DJH9 198 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 HNF4GQ14541 408 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 SSX2Q16385 188 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 C9orf139Q6ZV77 190 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 LINC01551Q86U37 167 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 ZNF418Q8TF45 676 aaPredicted RBP9.93□□□□□ -0.82
VRK3-202ENST00000377011 CORO2AQ92828 525 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 GGTLC1Q9BX51 225 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 FAM234AQ9H0X4 552 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 LINC00574Q9H8X3 128 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 NPVFQ9HCQ7 196 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 TMEM140Q9NV12 185 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 TCF19Q9Y242 345 aa9.93□□□□□ -0.82
VRK3-202ENST00000377011 LSM4Q9Y4Z0 139 aaKnown RBP9.93□□□□□ -0.82
VRK3-202ENST00000377011 PKD1L1Q8TDX9 2849 aa9.92□□□□□ -0.82
VRK3-202ENST00000377011 TRAV9-1A0A075B6T8 112 aa9.92□□□□□ -0.82
VRK3-202ENST00000377011 IGHV1-69DA0A0B4J2H0 117 aa9.92□□□□□ -0.82
VRK3-202ENST00000377011 MT-CO2P00403 227 aa9.92□□□□□ -0.82
VRK3-202ENST00000377011 IGHV1-69P01742 117 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms