RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 OR4C13Q8NGP0 309 aa20.48■□□□□ 0.87
C9orf40-201ENST00000376854 SAMD10Q9BYL1 202 aa20.48■□□□□ 0.87
C9orf40-201ENST00000376854 INS-IGF2F8WCM5 200 aa20.48■□□□□ 0.87
C9orf40-201ENST00000376854 TMEM167AQ8TBQ9 72 aa20.48■□□□□ 0.87
C9orf40-201ENST00000376854 H1FXQ92522 213 aaKnown RBP20.48■□□□□ 0.87
C9orf40-201ENST00000376854 WT1-ASQ06250 92 aa20.47■□□□□ 0.87
C9orf40-201ENST00000376854 DIAPH2-AS1Q14236 149 aa20.47■□□□□ 0.87
C9orf40-201ENST00000376854 GNB4Q9HAV0 340 aa20.47■□□□□ 0.87
C9orf40-201ENST00000376854 ROS1P08922 2347 aa20.47■□□□□ 0.87
C9orf40-201ENST00000376854 ACACAQ13085 2346 aa20.47■□□□□ 0.87
C9orf40-201ENST00000376854 DPRXA6NFQ7 191 aa20.47■□□□□ 0.87
C9orf40-201ENST00000376854 C16orf97H3BN30 126 aa20.47■□□□□ 0.87
C9orf40-201ENST00000376854 C10orf55Q5SWW7 151 aa20.47■□□□□ 0.87
C9orf40-201ENST00000376854 TMEM136Q6ZRR5 245 aa20.47■□□□□ 0.87
C9orf40-201ENST00000376854 TGIF2LXQ8IUE1 241 aa20.47■□□□□ 0.87
C9orf40-201ENST00000376854 OR4A5Q8NH83 315 aa20.47■□□□□ 0.87
C9orf40-201ENST00000376854 VSTM2AQ8TAG5 236 aa20.47■□□□□ 0.87
C9orf40-201ENST00000376854 SAP30LQ9HAJ7 183 aa20.47■□□□□ 0.87
C9orf40-201ENST00000376854 SERTAD4Q9NUC0 356 aa20.47■□□□□ 0.87
C9orf40-201ENST00000376854 CUL9Q8IWT3 2517 aa20.46■□□□□ 0.87
C9orf40-201ENST00000376854 PPIAL4EA0A075B759 164 aa20.46■□□□□ 0.87
C9orf40-201ENST00000376854 PPIAL4DF5H284 164 aa20.46■□□□□ 0.87
C9orf40-201ENST00000376854 COX7A2P2O60397 106 aa20.46■□□□□ 0.87
C9orf40-201ENST00000376854 PPIAL4FP0DN26 164 aa20.46■□□□□ 0.87
C9orf40-201ENST00000376854 TPTE2P1Q5T6R2 138 aa20.46■□□□□ 0.87
C9orf40-201ENST00000376854 PDPNQ86YL7 162 aa20.46■□□□□ 0.87
C9orf40-201ENST00000376854 SNHG12Q9BXW3 62 aa20.46■□□□□ 0.87
C9orf40-201ENST00000376854 FNDC4Q9H6D8 234 aaPredicted RBP20.46■□□□□ 0.87
C9orf40-201ENST00000376854 PPIAL4AQ9Y536 164 aa20.46■□□□□ 0.87
C9orf40-201ENST00000376854 CGB1A6NKQ9 187 aa20.45■□□□□ 0.87
C9orf40-201ENST00000376854 A0A0G2JNJ9 132 aa20.45■□□□□ 0.86
C9orf40-201ENST00000376854 SMIM27A0A1W2PRY6 76 aa20.45■□□□□ 0.86
C9orf40-201ENST00000376854 COX19Q49B96 90 aa20.45■□□□□ 0.86
C9orf40-201ENST00000376854 NHLRC2Q8NBF2 726 aa20.45■□□□□ 0.86
C9orf40-201ENST00000376854 NPIPB3Q92617 1050 aa20.45■□□□□ 0.86
C9orf40-201ENST00000376854 ZNF430Q9H8G1 570 aaPredicted RBP20.45■□□□□ 0.86
C9orf40-201ENST00000376854 ZNF355PQ9NSJ1 428 aa20.45■□□□□ 0.86
C9orf40-201ENST00000376854 Q9UFV3 132 aa20.45■□□□□ 0.86
C9orf40-201ENST00000376854 DCHS1Q96JQ0 3298 aa20.45■□□□□ 0.86
C9orf40-201ENST00000376854 TMEM178BH3BS89 294 aa20.44■□□□□ 0.86
C9orf40-201ENST00000376854 CDKN1AP38936 164 aa20.44■□□□□ 0.86
C9orf40-201ENST00000376854 BSPH1Q075Z2 132 aa20.44■□□□□ 0.86
C9orf40-201ENST00000376854 CCL17Q92583 94 aa20.44■□□□□ 0.86
C9orf40-201ENST00000376854 SH3BGRL2Q9UJC5 107 aa20.44■□□□□ 0.86
C9orf40-201ENST00000376854 CDC42EP3Q9UKI2 254 aa20.44■□□□□ 0.86
C9orf40-201ENST00000376854 APC2O95996 2303 aa20.44■□□□□ 0.86
C9orf40-201ENST00000376854 IGHV3-48P01763 117 aa20.44■□□□□ 0.86
C9orf40-201ENST00000376854 PYYP10082 97 aa20.44■□□□□ 0.86
C9orf40-201ENST00000376854 KIAA1644Q3SXP7 199 aa20.44■□□□□ 0.86
C9orf40-201ENST00000376854 C10orf113Q5VZT2 155 aa20.44■□□□□ 0.86
C9orf40-201ENST00000376854 TEX43Q6ZNM6 134 aa20.44■□□□□ 0.86
C9orf40-201ENST00000376854 LINC00479Q96M42 142 aa20.44■□□□□ 0.86
C9orf40-201ENST00000376854 MRPL54Q6P161 138 aaKnown RBP20.43■□□□□ 0.86
C9orf40-201ENST00000376854 LYPD2Q6UXB3 125 aa20.43■□□□□ 0.86
C9orf40-201ENST00000376854 OR1L4Q8NGR5 311 aa20.43■□□□□ 0.86
C9orf40-201ENST00000376854 TMEM186Q96B77 213 aa20.43■□□□□ 0.86
C9orf40-201ENST00000376854 ABHD17AQ96GS6 310 aa20.43■□□□□ 0.86
C9orf40-201ENST00000376854 PAXXQ9BUH6 204 aa20.43■□□□□ 0.86
C9orf40-201ENST00000376854 PCNX1Q96RV3 2341 aa20.43■□□□□ 0.86
C9orf40-201ENST00000376854 NDUFB3O43676 98 aa20.43■□□□□ 0.86
C9orf40-201ENST00000376854 IGLV2-23P01705 113 aa20.43■□□□□ 0.86
C9orf40-201ENST00000376854 AMY1AP04745 511 aa20.43■□□□□ 0.86
C9orf40-201ENST00000376854 BRS3P32247 399 aa20.43■□□□□ 0.86
C9orf40-201ENST00000376854 SUB1P53999 127 aaKnown RBP eCLIP20.43■□□□□ 0.865e-7■■□□□ 13.4
C9orf40-201ENST00000376854 NUTF2P61970 127 aaKnown RBP20.43■□□□□ 0.86
C9orf40-201ENST00000376854 TDRG1Q3Y452 100 aa20.43■□□□□ 0.86
C9orf40-201ENST00000376854 SIGLECL1Q8N7X8 197 aa20.43■□□□□ 0.86
C9orf40-201ENST00000376854 AMMECR1Q9Y4X0 333 aaPredicted RBP20.43■□□□□ 0.86
C9orf40-201ENST00000376854 ZGRF1Q86YA3 2104 aa20.43■□□□□ 0.86
C9orf40-201ENST00000376854 TCRBV4S1A1TA0A5B7 111 aa20.42■□□□□ 0.86
C9orf40-201ENST00000376854 M0R143 59 aa20.42■□□□□ 0.86
C9orf40-201ENST00000376854 FAM71F2Q6NXP2 309 aa20.42■□□□□ 0.86
C9orf40-201ENST00000376854 PATE2Q6UY27 113 aa20.42■□□□□ 0.86
C9orf40-201ENST00000376854 WASHC3Q9Y3C0 194 aa20.42■□□□□ 0.86
C9orf40-201ENST00000376854 BPIFB3P59826 476 aa20.42■□□□□ 0.86
C9orf40-201ENST00000376854 LRRC10Q5BKY1 277 aa20.42■□□□□ 0.86
C9orf40-201ENST00000376854 OR10J3Q5JRS4 329 aa20.42■□□□□ 0.86
C9orf40-201ENST00000376854 CA1P00915 261 aaPredicted RBP20.41■□□□□ 0.86
C9orf40-201ENST00000376854 LINC00311Q8N616 119 aa20.41■□□□□ 0.86
C9orf40-201ENST00000376854 VN1R17PQ8TDU5 208 aa20.41■□□□□ 0.86
C9orf40-201ENST00000376854 FAM103A1Q9BTL3 118 aaKnown RBP20.41■□□□□ 0.86
C9orf40-201ENST00000376854 IGKV1D-37A0A075B6S9 117 aa20.41■□□□□ 0.86
C9orf40-201ENST00000376854 HLA-DQA1P01909 254 aa20.41■□□□□ 0.86
C9orf40-201ENST00000376854 GPX1P07203 203 aa20.41■□□□□ 0.86
C9orf40-201ENST00000376854 ST6GALNAC6Q969X2 333 aa20.41■□□□□ 0.86
C9orf40-201ENST00000376854 CEP295Q9C0D2 2601 aa20.4■□□□□ 0.86
C9orf40-201ENST00000376854 THBDP07204 575 aa20.4■□□□□ 0.86
C9orf40-201ENST00000376854 ZNF329Q86UD4 541 aa20.4■□□□□ 0.86
C9orf40-201ENST00000376854 ZNF596Q8TC21 504 aa20.4■□□□□ 0.86
C9orf40-201ENST00000376854 MRPL36Q9P0J6 103 aaKnown RBP20.4■□□□□ 0.86
C9orf40-201ENST00000376854 IZUMO1RA6ND01 250 aa20.39■□□□□ 0.86
C9orf40-201ENST00000376854 PRRG2O14669 202 aa20.39■□□□□ 0.86
C9orf40-201ENST00000376854 TDGF1P3P51864 188 aa20.39■□□□□ 0.86
C9orf40-201ENST00000376854 ASPHD1Q5U4P2 390 aa20.39■□□□□ 0.86
C9orf40-201ENST00000376854 C8orf31Q8N9H6 132 aa20.39■□□□□ 0.86
C9orf40-201ENST00000376854 SLC25A17O43808 307 aa20.39■□□□□ 0.85
C9orf40-201ENST00000376854 TMEM183BQ1AE95 376 aa20.39■□□□□ 0.85
C9orf40-201ENST00000376854 ZNF705AQ6ZN79 300 aaPredicted RBP20.39■□□□□ 0.85
C9orf40-201ENST00000376854 THAP8Q8NA92 274 aa20.39■□□□□ 0.85
C9orf40-201ENST00000376854 FAM168AQ92567 244 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms