RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 PGPEP1LA6NFU8 196 aa8.91□□□□□ -0.98
SVIP-201ENST00000354193 NUDT19A8MXV4 375 aa8.91□□□□□ -0.98
SVIP-201ENST00000354193 IGLV1-47P01700 117 aa8.91□□□□□ -0.98
SVIP-201ENST00000354193 RNASE2P10153 161 aaKnown RBP8.91□□□□□ -0.98
SVIP-201ENST00000354193 SSX3Q99909 188 aa8.91□□□□□ -0.98
SVIP-201ENST00000354193 ZNF320A2RRD8 509 aa8.91□□□□□ -0.98
SVIP-201ENST00000354193 MEF2BQ02080 365 aaPredicted RBP8.91□□□□□ -0.98
SVIP-201ENST00000354193 CD69Q07108 199 aa8.91□□□□□ -0.98
SVIP-201ENST00000354193 C10orf113Q5VZT2 155 aa8.91□□□□□ -0.98
SVIP-201ENST00000354193 BSNQ9UPA5 3926 aa8.91□□□□□ -0.98
SVIP-201ENST00000354193 IGHV2-70DA0A0C4DH43 119 aa8.91□□□□□ -0.98
SVIP-201ENST00000354193 H3BUX3 64 aa8.91□□□□□ -0.98
SVIP-201ENST00000354193 IGHV3-11P01762 117 aa8.91□□□□□ -0.98
SVIP-201ENST00000354193 ADCYAP1P18509 176 aa8.91□□□□□ -0.98
SVIP-201ENST00000354193 TAS2R45P59539 299 aa8.91□□□□□ -0.98
SVIP-201ENST00000354193 DLK1P80370 383 aa8.91□□□□□ -0.98
SVIP-201ENST00000354193 LDLRAD2Q5SZI1 272 aa8.91□□□□□ -0.98
SVIP-201ENST00000354193 DYNAPQ8N1N2 210 aa8.91□□□□□ -0.98
SVIP-201ENST00000354193 VAX2Q9UIW0 290 aa8.91□□□□□ -0.98
SVIP-201ENST00000354193 PF4V1P10720 104 aa8.9□□□□□ -0.98
SVIP-201ENST00000354193 BPIFB3P59826 476 aa8.9□□□□□ -0.98
SVIP-201ENST00000354193 SSBP2P81877 361 aaPredicted RBP8.9□□□□□ -0.98
SVIP-201ENST00000354193 RHEBQ15382 184 aa8.9□□□□□ -0.98
SVIP-201ENST00000354193 IL17RELQ6ZVW7 336 aa8.9□□□□□ -0.98
SVIP-201ENST00000354193 NHLRC2Q8NBF2 726 aa8.9□□□□□ -0.98
SVIP-201ENST00000354193 FRZBQ92765 325 aa8.9□□□□□ -0.98
SVIP-201ENST00000354193 PSMG3Q9BT73 122 aaPredicted RBP8.9□□□□□ -0.98
SVIP-201ENST00000354193 SEC11CQ9BY50 192 aa8.9□□□□□ -0.98
SVIP-201ENST00000354193 DSCAML1Q8TD84 2053 aa8.9□□□□□ -0.98
SVIP-201ENST00000354193 NPFFO15130 113 aa8.9□□□□□ -0.98
SVIP-201ENST00000354193 RAB4BP61018 213 aa8.9□□□□□ -0.98
SVIP-201ENST00000354193 PAX5Q02548 391 aa8.9□□□□□ -0.98
SVIP-201ENST00000354193 EIF4EBP1Q13541 118 aaPredicted RBP8.9□□□□□ -0.98
SVIP-201ENST00000354193 COMMD1Q8N668 190 aa8.9□□□□□ -0.98
SVIP-201ENST00000354193 ARPC1AQ92747 370 aa8.9□□□□□ -0.98
SVIP-201ENST00000354193 TNFRSF14Q92956 283 aa8.9□□□□□ -0.98
SVIP-201ENST00000354193 TET2Q6N021 2002 aaPredicted RBP8.9□□□□□ -0.98
SVIP-201ENST00000354193 G3V318 75 aa8.9□□□□□ -0.98
SVIP-201ENST00000354193 PYYP10082 97 aa8.9□□□□□ -0.98
SVIP-201ENST00000354193 DLX6P56179 175 aa8.9□□□□□ -0.98
SVIP-201ENST00000354193 M0R1W7 72 aa8.9□□□□□ -0.99
SVIP-201ENST00000354193 IGHV4-38-2P0DP08 117 aa8.9□□□□□ -0.99
SVIP-201ENST00000354193 SRP14P37108 136 aaKnown RBP8.9□□□□□ -0.99
SVIP-201ENST00000354193 LMO4P61968 165 aa8.9□□□□□ -0.99
SVIP-201ENST00000354193 ZNF726P1Q15940 193 aa8.9□□□□□ -0.99
SVIP-201ENST00000354193 BEND2Q8NDZ0 799 aa8.9□□□□□ -0.99
SVIP-201ENST00000354193 OR52E5Q8NH55 327 aa8.9□□□□□ -0.99
SVIP-201ENST00000354193 MARVELD3Q96A59 401 aa8.9□□□□□ -0.99
SVIP-201ENST00000354193 SMCO4Q9NRQ5 59 aa8.9□□□□□ -0.99
SVIP-201ENST00000354193 A0A1W2PPQ1 181 aa8.89□□□□□ -0.99
SVIP-201ENST00000354193 OR2T8A6NH00 312 aa8.89□□□□□ -0.99
SVIP-201ENST00000354193 LY86O95711 162 aa8.89□□□□□ -0.99
SVIP-201ENST00000354193 C5orf64Q2M2E5 130 aa8.89□□□□□ -0.99
SVIP-201ENST00000354193 ETFRF1Q6IPR1 90 aa8.89□□□□□ -0.99
SVIP-201ENST00000354193 SPSB3Q6PJ21 355 aa8.89□□□□□ -0.99
SVIP-201ENST00000354193 TMEM144Q7Z5S9 345 aa8.89□□□□□ -0.99
SVIP-201ENST00000354193 ST6GALNAC6Q969X2 333 aa8.89□□□□□ -0.99
SVIP-201ENST00000354193 TOLLIPQ9H0E2 274 aa8.89□□□□□ -0.99
SVIP-201ENST00000354193 FNDC4Q9H6D8 234 aaPredicted RBP8.89□□□□□ -0.99
SVIP-201ENST00000354193 NDUFA4L2Q9NRX3 87 aa8.89□□□□□ -0.99
SVIP-201ENST00000354193 TEX45Q8NA69 505 aa8.89□□□□□ -0.99
SVIP-201ENST00000354193 GCN1Q92616 2671 aaKnown RBP8.89□□□□□ -0.99
SVIP-201ENST00000354193 TEP1Q99973 2627 aaKnown RBP8.89□□□□□ -0.99
SVIP-201ENST00000354193 MDFIC2A0A1B0GVS7 189 aa8.89□□□□□ -0.99
SVIP-201ENST00000354193 MPDU1O75352 247 aa8.89□□□□□ -0.99
SVIP-201ENST00000354193 IL4P05112 153 aa8.89□□□□□ -0.99
SVIP-201ENST00000354193 RD3LP0DJH9 198 aa8.89□□□□□ -0.99
SVIP-201ENST00000354193 FCGR2BP31994 310 aaPredicted RBP8.89□□□□□ -0.99
SVIP-201ENST00000354193 TIGITQ495A1 244 aa8.89□□□□□ -0.99
SVIP-201ENST00000354193 LCNL1Q6ZST4 164 aa8.89□□□□□ -0.99
SVIP-201ENST00000354193 ZNF329Q86UD4 541 aa8.89□□□□□ -0.99
SVIP-201ENST00000354193 LINC00311Q8N616 119 aa8.89□□□□□ -0.99
SVIP-201ENST00000354193 DNAJC4Q9NNZ3 241 aa8.89□□□□□ -0.99
SVIP-201ENST00000354193 ZNF257Q9Y2Q1 563 aa8.89□□□□□ -0.99
SVIP-201ENST00000354193 H7BYZ3 331 aa8.88□□□□□ -0.99
SVIP-201ENST00000354193 MSMBP08118 114 aa8.88□□□□□ -0.99
SVIP-201ENST00000354193 GPR183P32249 361 aa8.88□□□□□ -0.99
SVIP-201ENST00000354193 Q5PR19 223 aa8.88□□□□□ -0.99
SVIP-201ENST00000354193 TMEM170AQ8WVE7 144 aa8.88□□□□□ -0.99
SVIP-201ENST00000354193 TECRQ9NZ01 308 aaKnown RBP8.88□□□□□ -0.99
SVIP-201ENST00000354193 THYN1Q9P016 225 aa8.88□□□□□ -0.99
SVIP-201ENST00000354193 SLC45A2Q9UMX9 530 aa8.88□□□□□ -0.99
SVIP-201ENST00000354193 HOXB4P17483 251 aaPredicted RBP8.88□□□□□ -0.99
SVIP-201ENST00000354193 ICAM4Q14773 271 aa8.88□□□□□ -0.99
SVIP-201ENST00000354193 CYP2G1PQ6ZSU1 146 aa8.88□□□□□ -0.99
SVIP-201ENST00000354193 LINC00305Q7Z4B0 112 aa8.88□□□□□ -0.99
SVIP-201ENST00000354193 CMTM2Q8TAZ6 248 aa8.88□□□□□ -0.99
SVIP-201ENST00000354193 C11orf1Q9H5F2 150 aa8.88□□□□□ -0.99
SVIP-201ENST00000354193 TEX15Q9BXT5 2789 aa8.88□□□□□ -0.99
SVIP-201ENST00000354193 KHDC3LQ587J8 217 aa8.88□□□□□ -0.99
SVIP-201ENST00000354193 ZNF343Q6P1L6 599 aa8.88□□□□□ -0.99
SVIP-201ENST00000354193 J3QKU1 62 aa8.88□□□□□ -0.99
SVIP-201ENST00000354193 SLC25A5P05141 298 aaKnown RBP8.88□□□□□ -0.99
SVIP-201ENST00000354193 P0C879 139 aa8.88□□□□□ -0.99
SVIP-201ENST00000354193 CRYBB3P26998 211 aa8.88□□□□□ -0.99
SVIP-201ENST00000354193 C16orf82Q7Z2V1 217 aa8.88□□□□□ -0.99
SVIP-201ENST00000354193 Q96MF0 132 aa8.88□□□□□ -0.99
SVIP-201ENST00000354193 TPPP3Q9BW30 176 aa8.88□□□□□ -0.99
SVIP-201ENST00000354193 FBXL7Q9UJT9 491 aa8.88□□□□□ -0.99
SVIP-201ENST00000354193 PCP4L1A6NKN8 68 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms