RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 LY6LH3BQJ8 138 aa6.54□□□□□ -1.36
CD44-205ENST00000352818 BUB1B-PAK6H3BSN5 160 aa6.54□□□□□ -1.36
CD44-205ENST00000352818 CYB5BO43169 146 aa6.54□□□□□ -1.36
CD44-205ENST00000352818 OPN1MWP04001 364 aa6.54□□□□□ -1.36
CD44-205ENST00000352818 IFNA4P05014 189 aa6.54□□□□□ -1.36
CD44-205ENST00000352818 OPN1MW2P0DN77 364 aa6.54□□□□□ -1.36
CD44-205ENST00000352818 OPN1MW3P0DN78 364 aa6.54□□□□□ -1.36
CD44-205ENST00000352818 RNASE2P10153 161 aaKnown RBP6.54□□□□□ -1.36
CD44-205ENST00000352818 MAS1LP35410 378 aa6.54□□□□□ -1.36
CD44-205ENST00000352818 RPL29P47914 159 aaKnown RBP6.54□□□□□ -1.36
CD44-205ENST00000352818 RPS16P62249 146 aaKnown RBP6.54□□□□□ -1.36
CD44-205ENST00000352818 CASC10Q5T4H9 136 aa6.54□□□□□ -1.36
CD44-205ENST00000352818 PVRIGQ6DKI7 326 aa6.54□□□□□ -1.36
CD44-205ENST00000352818 LCN15Q6UWW0 184 aa6.54□□□□□ -1.36
CD44-205ENST00000352818 RBMS3Q6XE24 437 aaKnown RBP6.54□□□□□ -1.36
CD44-205ENST00000352818 C1orf122Q6ZSJ8 110 aa6.54□□□□□ -1.36
CD44-205ENST00000352818 MRPL41Q8IXM3 137 aaKnown RBP6.54□□□□□ -1.36
CD44-205ENST00000352818 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.54□□□□□ -1.36
CD44-205ENST00000352818 OR11H6Q8NGC7 330 aa6.54□□□□□ -1.36
CD44-205ENST00000352818 OR4P4Q8NGL7 312 aa6.54□□□□□ -1.36
CD44-205ENST00000352818 OR10G9Q8NGN4 311 aa6.54□□□□□ -1.36
CD44-205ENST00000352818 OR10G7Q8NGN6 311 aa6.54□□□□□ -1.36
CD44-205ENST00000352818 C17orf50Q8WW18 174 aa6.54□□□□□ -1.36
CD44-205ENST00000352818 MGST2Q99735 147 aa6.54□□□□□ -1.36
CD44-205ENST00000352818 COMMD5Q9GZQ3 224 aa6.54□□□□□ -1.36
CD44-205ENST00000352818 VAX2Q9UIW0 290 aa6.54□□□□□ -1.36
CD44-205ENST00000352818 PLECQ15149 4684 aaKnown RBP6.54□□□□□ -1.36
CD44-205ENST00000352818 DOCK11Q5JSL3 2073 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 IGHV1-3A0A0C4DH29 117 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 A0A1B0GUS0 222 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 A0A1B0GV50 99 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 SMCO3A2RU48 225 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 ODF3BA8MYP8 253 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 CRYGBP07316 175 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 GPX4P36969 197 aaPredicted RBP6.53□□□□□ -1.36
CD44-205ENST00000352818 REG1BP48304 166 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 CDC34P49427 236 aaPredicted RBP6.53□□□□□ -1.36
CD44-205ENST00000352818 PSMB3P49720 205 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 ERHP84090 104 aaKnown RBP6.53□□□□□ -1.36
CD44-205ENST00000352818 PAX2Q02962 417 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 RAB31Q13636 194 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 DIAPH2-AS1Q14236 149 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 HAGHQ16775 308 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 MRGPRG-AS1Q2M3A8 158 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 ARSJQ5FYB0 599 aaPredicted RBP6.53□□□□□ -1.36
CD44-205ENST00000352818 KLF17Q5JT82 389 aaPredicted RBP6.53□□□□□ -1.36
CD44-205ENST00000352818 TEPPQ6URK8 271 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 TMEM144Q7Z5S9 345 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 SLC35E3Q7Z769 313 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 PNKDQ8N490 385 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 TEX29Q8N6K0 151 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 C15orf54Q8N8G6 183 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 CYB561D1Q8N8Q1 229 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 ZNF114Q8NC26 417 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 RNASEH2CQ8TDP1 164 aaKnown RBP6.53□□□□□ -1.36
CD44-205ENST00000352818 RXFP4Q8TDU9 374 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 CACNG8Q8WXS5 425 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 SSBP3Q9BWW4 388 aaPredicted RBP6.53□□□□□ -1.36
CD44-205ENST00000352818 SLC25A22Q9H936 323 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 SMCO4Q9NRQ5 59 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 C1RLQ9NZP8 487 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 GNG13Q9P2W3 67 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 PXMP4Q9Y6I8 212 aa6.53□□□□□ -1.36
CD44-205ENST00000352818 A0A087WWC5 75 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 A0A1W2PPI3 338 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 CLPSL1A2RUU4 121 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 FAM181BA6NEQ2 426 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 CGB1A6NKQ9 187 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 OOSP1A8MZH6 123 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 B4DEV8 164 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 TMEM250H0YL14 139 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 TSPAN4O14817 238 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 TSPAN9O75954 239 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 YIF1AO95070 293 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 OR13C7P0DN81 318 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 GPR6P46095 362 aaPredicted RBP6.52□□□□□ -1.37
CD44-205ENST00000352818 SUB1P53999 127 aaKnown RBP eCLIP6.52□□□□□ -1.37
CD44-205ENST00000352818 PROK1P58294 105 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 PRR20EP86478 221 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 PRR20CP86479 221 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 PRR20DP86480 221 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 PRR20BP86481 221 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 PRR20AP86496 221 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 MEF2BQ02080 365 aaPredicted RBP6.52□□□□□ -1.37
CD44-205ENST00000352818 CD69Q07108 199 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 PNRC1Q12796 327 aaPredicted RBP6.52□□□□□ -1.37
CD44-205ENST00000352818 HABP2Q14520 560 aaPredicted RBP6.52□□□□□ -1.37
CD44-205ENST00000352818 TPTE2P1Q5T6R2 138 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 FAM90A2PQ658T7 463 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 FAM122CQ6P4D5 195 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 CBLN2Q8IUK8 224 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 MMD2Q8IY49 270 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 RAB24Q969Q5 203 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 SLC35E1Q96K37 410 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 TXNDC17Q9BRA2 123 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 SRSF8Q9BRL6 282 aaKnown RBP6.52□□□□□ -1.37
CD44-205ENST00000352818 ZNF430Q9H8G1 570 aaPredicted RBP6.52□□□□□ -1.37
CD44-205ENST00000352818 ONECUT1Q9UBC0 465 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 INSIG2Q9Y5U4 225 aa6.52□□□□□ -1.37
CD44-205ENST00000352818 ARL2-SNX15V9GYD0 113 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 231.7 ms