RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 EGR4Q05215 589 aa9.97□□□□□ -0.81
TRAF3-201ENST00000347662 STPG2Q8N412 459 aa9.97□□□□□ -0.81
TRAF3-201ENST00000347662 THAP8Q8NA92 274 aa9.97□□□□□ -0.81
TRAF3-201ENST00000347662 C21orf62Q9NYP8 219 aa9.97□□□□□ -0.81
TRAF3-201ENST00000347662 SIPA1L1O43166 1804 aa9.97□□□□□ -0.81
TRAF3-201ENST00000347662 H0YL77 283 aa9.97□□□□□ -0.81
TRAF3-201ENST00000347662 VSIG8P0DPA2 414 aa9.97□□□□□ -0.81
TRAF3-201ENST00000347662 VWCEQ96DN2 955 aa9.97□□□□□ -0.81
TRAF3-201ENST00000347662 SIGLEC12Q96PQ1 595 aa9.97□□□□□ -0.81
TRAF3-201ENST00000347662 ARFGEF3Q5TH69 2177 aa9.96□□□□□ -0.81
TRAF3-201ENST00000347662 TMEM91Q6ZNR0 172 aa9.96□□□□□ -0.81
TRAF3-201ENST00000347662 MGST2Q99735 147 aa9.96□□□□□ -0.81
TRAF3-201ENST00000347662 hADV29S1A0JD25 119 aa9.96□□□□□ -0.81
TRAF3-201ENST00000347662 TCRAP04437 139 aa9.96□□□□□ -0.81
TRAF3-201ENST00000347662 GLIPR1P48060 266 aa9.96□□□□□ -0.81
TRAF3-201ENST00000347662 SRSF1Q07955 248 aaKnown RBP eCLIP9.96□□□□□ -0.81
TRAF3-201ENST00000347662 WNT2BQ93097 391 aa9.96□□□□□ -0.81
TRAF3-201ENST00000347662 FMC1Q96HJ9 113 aa9.96□□□□□ -0.81
TRAF3-201ENST00000347662 LTBP1Q14766 1721 aa9.96□□□□□ -0.81
TRAF3-201ENST00000347662 CHKB-CPT1BH3BT56 60 aa9.96□□□□□ -0.81
TRAF3-201ENST00000347662 GCHFRP30047 84 aa9.96□□□□□ -0.81
TRAF3-201ENST00000347662 GPX4P36969 197 aaPredicted RBP9.96□□□□□ -0.81
TRAF3-201ENST00000347662 KLF14Q8TD94 323 aaPredicted RBP9.96□□□□□ -0.81
TRAF3-201ENST00000347662 PRB1P04280 392 aa9.96□□□□□ -0.82
TRAF3-201ENST00000347662 SIGMAR1Q99720 223 aa9.96□□□□□ -0.82
TRAF3-201ENST00000347662 TRGV1A0A0A0MS02 117 aa9.96□□□□□ -0.82
TRAF3-201ENST00000347662 RPL39P5Q59GN2 51 aa9.96□□□□□ -0.82
TRAF3-201ENST00000347662 GAGE2AQ6NT46 116 aa9.96□□□□□ -0.82
TRAF3-201ENST00000347662 ZNRF1Q8ND25 227 aa9.96□□□□□ -0.82
TRAF3-201ENST00000347662 TNFRSF14Q92956 283 aa9.96□□□□□ -0.82
TRAF3-201ENST00000347662 SLC17A3O00476 420 aa9.96□□□□□ -0.82
TRAF3-201ENST00000347662 RCHY1Q96PM5 261 aa9.96□□□□□ -0.82
TRAF3-201ENST00000347662 TMEM8BA6NDV4 472 aa9.95□□□□□ -0.82
TRAF3-201ENST00000347662 CGAP01215 116 aa9.95□□□□□ -0.82
TRAF3-201ENST00000347662 HMGA2P52926 109 aa9.95□□□□□ -0.82
TRAF3-201ENST00000347662 TCTEX1D4Q5JR98 221 aa9.95□□□□□ -0.82
TRAF3-201ENST00000347662 SLC25A28Q96A46 364 aa9.95□□□□□ -0.82
TRAF3-201ENST00000347662 TRAV14DV4A0A0A6YYC5 116 aa9.95□□□□□ -0.82
TRAF3-201ENST00000347662 DUSP14O95147 198 aaKnown RBP9.95□□□□□ -0.82
TRAF3-201ENST00000347662 C19orf24Q9BVV8 132 aa9.95□□□□□ -0.82
TRAF3-201ENST00000347662 C1QTNF12Q5T7M4 302 aa9.95□□□□□ -0.82
TRAF3-201ENST00000347662 DTX1Q86Y01 620 aa9.95□□□□□ -0.82
TRAF3-201ENST00000347662 OR52E5Q8NH55 327 aa9.95□□□□□ -0.82
TRAF3-201ENST00000347662 TCF19Q9Y242 345 aa9.95□□□□□ -0.82
TRAF3-201ENST00000347662 PLCE1Q9P212 2302 aa9.95□□□□□ -0.82
TRAF3-201ENST00000347662 PPP1R32Q7Z5V6 425 aa9.95□□□□□ -0.82
TRAF3-201ENST00000347662 RPP21Q9H633 154 aaKnown RBP9.95□□□□□ -0.82
TRAF3-201ENST00000347662 CDKN1AP38936 164 aa9.95□□□□□ -0.82
TRAF3-201ENST00000347662 NKAPP1Q8N9T2 125 aa9.95□□□□□ -0.82
TRAF3-201ENST00000347662 SLIRPQ9GZT3 109 aaKnown RBP9.95□□□□□ -0.82
TRAF3-201ENST00000347662 SPG11Q96JI7 2443 aa9.95□□□□□ -0.82
TRAF3-201ENST00000347662 C22orf46C9J442 243 aa9.95□□□□□ -0.82
TRAF3-201ENST00000347662 DPM2O94777 84 aa9.95□□□□□ -0.82
TRAF3-201ENST00000347662 CD300EQ496F6 205 aaPredicted RBP9.95□□□□□ -0.82
TRAF3-201ENST00000347662 PSMG4Q5JS54 123 aa9.95□□□□□ -0.82
TRAF3-201ENST00000347662 HIST1H2BAQ96A08 127 aa9.95□□□□□ -0.82
TRAF3-201ENST00000347662 DNAJC30Q96LL9 226 aa9.95□□□□□ -0.82
TRAF3-201ENST00000347662 Q9H3A6 140 aa9.95□□□□□ -0.82
TRAF3-201ENST00000347662 EPDR1Q9UM22 224 aa9.95□□□□□ -0.82
TRAF3-201ENST00000347662 EFEMP2O95967 443 aa9.94□□□□□ -0.82
TRAF3-201ENST00000347662 GAGE2BQ13066 116 aa9.94□□□□□ -0.82
TRAF3-201ENST00000347662 IMMP2LQ96T52 175 aa9.94□□□□□ -0.82
TRAF3-201ENST00000347662 DLL3Q9NYJ7 618 aa9.94□□□□□ -0.82
TRAF3-201ENST00000347662 SONP18583 2426 aaKnown RBP9.94□□□□□ -0.82
TRAF3-201ENST00000347662 TRGV11A0A075B6L2 103 aa9.94□□□□□ -0.82
TRAF3-201ENST00000347662 DPM3Q9P2X0 92 aa9.94□□□□□ -0.82
TRAF3-201ENST00000347662 MRPL52Q86TS9 123 aaKnown RBP9.94□□□□□ -0.82
TRAF3-201ENST00000347662 ZNF729A6NN14 1252 aaPredicted RBP9.94□□□□□ -0.82
TRAF3-201ENST00000347662 TMEM222Q9H0R3 208 aa9.94□□□□□ -0.82
TRAF3-201ENST00000347662 LEPROTO15243 131 aa9.94□□□□□ -0.82
TRAF3-201ENST00000347662 CD24P25063 80 aa9.94□□□□□ -0.82
TRAF3-201ENST00000347662 XAF1Q6GPH4 301 aa9.94□□□□□ -0.82
TRAF3-201ENST00000347662 PTPN13Q12923 2485 aa9.94□□□□□ -0.82
TRAF3-201ENST00000347662 C5orf30Q96GV9 206 aa9.94□□□□□ -0.82
TRAF3-201ENST00000347662 WDFY2Q96P53 400 aa9.94□□□□□ -0.82
TRAF3-201ENST00000347662 SLC50A1Q9BRV3 221 aa9.94□□□□□ -0.82
TRAF3-201ENST00000347662 ERCC8Q13216 396 aa9.93□□□□□ -0.82
TRAF3-201ENST00000347662 GREB1LQ9C091 1923 aaPredicted RBP9.93□□□□□ -0.82
TRAF3-201ENST00000347662 C4orf51C9J302 202 aa9.93□□□□□ -0.82
TRAF3-201ENST00000347662 LOC285556D6RIA3 1793 aa9.93□□□□□ -0.82
TRAF3-201ENST00000347662 ZNF561-AS1K7EIQ3 104 aa9.93□□□□□ -0.82
TRAF3-201ENST00000347662 PRB2P02812 416 aaPredicted RBP9.93□□□□□ -0.82
TRAF3-201ENST00000347662 CELA3AP09093 270 aa9.93□□□□□ -0.82
TRAF3-201ENST00000347662 MSGN1A6NI15 193 aa9.93□□□□□ -0.82
TRAF3-201ENST00000347662 PUSL1Q8N0Z8 303 aaKnown RBP9.93□□□□□ -0.82
TRAF3-201ENST00000347662 SMDT1Q9H4I9 107 aa9.93□□□□□ -0.82
TRAF3-201ENST00000347662 JPT1Q9UK76 154 aa9.93□□□□□ -0.82
TRAF3-201ENST00000347662 TRAV8-3A0A0A6YYJ7 113 aa9.93□□□□□ -0.82
TRAF3-201ENST00000347662 DMKNQ6E0U4 476 aaPredicted RBP9.93□□□□□ -0.82
TRAF3-201ENST00000347662 OTOGLQ3ZCN5 2332 aa9.93□□□□□ -0.82
TRAF3-201ENST00000347662 RFPL3SP0C7P2 107 aa9.93□□□□□ -0.82
TRAF3-201ENST00000347662 FAM27E3Q08E93 113 aa9.93□□□□□ -0.82
TRAF3-201ENST00000347662 NEU4Q8WWR8 484 aaPredicted RBP9.93□□□□□ -0.82
TRAF3-201ENST00000347662 SS18Q15532 418 aa9.93□□□□□ -0.82
TRAF3-201ENST00000347662 CD300LDQ6UXZ3 194 aa9.93□□□□□ -0.82
TRAF3-201ENST00000347662 UBE2E2Q96LR5 201 aa9.93□□□□□ -0.82
TRAF3-201ENST00000347662 ZNF236Q9UL36 1845 aa9.92□□□□□ -0.82
TRAF3-201ENST00000347662 SCO2A0A1W2PP80 73 aa9.92□□□□□ -0.82
TRAF3-201ENST00000347662 BSPH1Q075Z2 132 aa9.92□□□□□ -0.82
TRAF3-201ENST00000347662 ZIC4Q8N9L1 334 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms