RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 LINC01548A6NM66 108 aa10.74□□□□□ -0.69
CDC42-202ENST00000344548 B4DSR2 109 aa10.74□□□□□ -0.69
CDC42-202ENST00000344548 SEC14L6B5MCN3 397 aa10.74□□□□□ -0.69
CDC42-202ENST00000344548 NUPL2O15504 423 aaKnown RBP10.74□□□□□ -0.69
CDC42-202ENST00000344548 MBP02144 154 aa10.74□□□□□ -0.69
CDC42-202ENST00000344548 CRYGCP07315 174 aa10.74□□□□□ -0.69
CDC42-202ENST00000344548 SRP19P09132 144 aaKnown RBP10.74□□□□□ -0.69
CDC42-202ENST00000344548 CTRB1P17538 263 aa10.74□□□□□ -0.69
CDC42-202ENST00000344548 GPX4P36969 197 aaPredicted RBP10.74□□□□□ -0.69
CDC42-202ENST00000344548 RND2P52198 227 aa10.74□□□□□ -0.69
CDC42-202ENST00000344548 DEFB113Q30KQ7 82 aa10.74□□□□□ -0.69
CDC42-202ENST00000344548 ZNF506Q5JVG8 444 aa10.74□□□□□ -0.69
CDC42-202ENST00000344548 CTRB2Q6GPI1 263 aa10.74□□□□□ -0.69
CDC42-202ENST00000344548 KRTAP1-3Q8IUG1 177 aa10.74□□□□□ -0.69
CDC42-202ENST00000344548 OR1P1Q8NH06 330 aa10.74□□□□□ -0.69
CDC42-202ENST00000344548 CR1P17927 2039 aa10.74□□□□□ -0.69
CDC42-202ENST00000344548 IGHV7-81A0A0B4J1V7 117 aa10.73□□□□□ -0.69
CDC42-202ENST00000344548 SLC25A16P16260 332 aa10.73□□□□□ -0.69
CDC42-202ENST00000344548 SUB1P53999 127 aaKnown RBP eCLIP10.73□□□□□ -0.69
CDC42-202ENST00000344548 DSCR9P59020 149 aa10.73□□□□□ -0.69
CDC42-202ENST00000344548 ZNF562Q6V9R5 426 aa10.73□□□□□ -0.69
CDC42-202ENST00000344548 TMEM219Q86XT9 240 aa10.73□□□□□ -0.69
CDC42-202ENST00000344548 PBDC1Q9BVG4 233 aa10.73□□□□□ -0.69
CDC42-202ENST00000344548 CCDC168Q8NDH2 2452 aa10.73□□□□□ -0.69
CDC42-202ENST00000344548 TEX15Q9BXT5 2789 aa10.73□□□□□ -0.69
CDC42-202ENST00000344548 CYB5BO43169 146 aa10.73□□□□□ -0.69
CDC42-202ENST00000344548 SOX15O60248 233 aa10.73□□□□□ -0.69
CDC42-202ENST00000344548 MT-CO2P00403 227 aa10.73□□□□□ -0.69
CDC42-202ENST00000344548 FAM106CPP0CH98 169 aa10.73□□□□□ -0.69
CDC42-202ENST00000344548 CEBPGP53567 150 aa10.73□□□□□ -0.69
CDC42-202ENST00000344548 MORN5Q5VZ52 161 aa10.73□□□□□ -0.69
CDC42-202ENST00000344548 CYB561D1Q8N8Q1 229 aa10.73□□□□□ -0.69
CDC42-202ENST00000344548 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.73□□□□□ -0.69
CDC42-202ENST00000344548 SLC35E1Q96K37 410 aa10.73□□□□□ -0.69
CDC42-202ENST00000344548 SLC35B3Q9H1N7 401 aa10.73□□□□□ -0.69
CDC42-202ENST00000344548 S4R3C0 116 aa10.73□□□□□ -0.69
CDC42-202ENST00000344548 ITPR2Q14571 2701 aa10.73□□□□□ -0.69
CDC42-202ENST00000344548 FAM74A7A6NL05 159 aa10.72□□□□□ -0.69
CDC42-202ENST00000344548 BCL2P10415 239 aa10.72□□□□□ -0.69
CDC42-202ENST00000344548 FAM74A3Q4VXF1 159 aa10.72□□□□□ -0.69
CDC42-202ENST00000344548 IQCF2Q8IXL9 164 aa10.72□□□□□ -0.69
CDC42-202ENST00000344548 TMEM37Q8WXS4 190 aa10.72□□□□□ -0.69
CDC42-202ENST00000344548 PDZD2O15018 2839 aa10.72□□□□□ -0.69
CDC42-202ENST00000344548 I3L2K1 104 aa10.72□□□□□ -0.69
CDC42-202ENST00000344548 MIR17HGQ75NE6 70 aa10.72□□□□□ -0.69
CDC42-202ENST00000344548 ARPC1AQ92747 370 aa10.72□□□□□ -0.69
CDC42-202ENST00000344548 C20orf24Q9BUV8 137 aa10.72□□□□□ -0.69
CDC42-202ENST00000344548 A0A1W2PPV4 95 aa10.71□□□□□ -0.69
CDC42-202ENST00000344548 PSMB11A5LHX3 300 aa10.71□□□□□ -0.69
CDC42-202ENST00000344548 ARL14EPLP0DKL9 152 aa10.71□□□□□ -0.69
CDC42-202ENST00000344548 BRS3P32247 399 aa10.71□□□□□ -0.69
CDC42-202ENST00000344548 AKR1C3P42330 323 aa10.71□□□□□ -0.69
CDC42-202ENST00000344548 CD81P60033 236 aa10.71□□□□□ -0.69
CDC42-202ENST00000344548 Q5PR19 223 aa10.71□□□□□ -0.69
CDC42-202ENST00000344548 C22orf15Q8WYQ4 148 aa10.71□□□□□ -0.69
CDC42-202ENST00000344548 FANCD2OSQ96PS1 177 aa10.71□□□□□ -0.69
CDC42-202ENST00000344548 NKX6-2Q9C056 277 aaPredicted RBP10.71□□□□□ -0.69
CDC42-202ENST00000344548 MDFIC2A0A1B0GVS7 189 aa10.7□□□□□ -0.7
CDC42-202ENST00000344548 K7EIM0 57 aa10.7□□□□□ -0.7
CDC42-202ENST00000344548 AMY1AP04745 511 aa10.7□□□□□ -0.7
CDC42-202ENST00000344548 RAB31Q13636 194 aa10.7□□□□□ -0.7
CDC42-202ENST00000344548 KHDC3LQ587J8 217 aa10.7□□□□□ -0.7
CDC42-202ENST00000344548 FAM78BQ5VT40 261 aa10.7□□□□□ -0.7
CDC42-202ENST00000344548 TMEM88Q6PEY1 159 aa10.7□□□□□ -0.7
CDC42-202ENST00000344548 CYP2G1PQ6ZSU1 146 aa10.7□□□□□ -0.7
CDC42-202ENST00000344548 SVBPQ8N300 66 aa10.7□□□□□ -0.7
CDC42-202ENST00000344548 DOK5Q9P104 306 aa10.7□□□□□ -0.7
CDC42-202ENST00000344548 CREBBPQ92793 2442 aa10.7□□□□□ -0.7
CDC42-202ENST00000344548 DNASE2O00115 360 aaPredicted RBP10.7□□□□□ -0.7
CDC42-202ENST00000344548 PAGE4O60829 102 aa10.7□□□□□ -0.7
CDC42-202ENST00000344548 TGFAP01135 160 aa10.7□□□□□ -0.7
CDC42-202ENST00000344548 HSPB1P04792 205 aaKnown RBP10.7□□□□□ -0.7
CDC42-202ENST00000344548 STAG3L2P0CL84 134 aa10.7□□□□□ -0.7
CDC42-202ENST00000344548 STAG3L3P0CL85 134 aa10.7□□□□□ -0.7
CDC42-202ENST00000344548 PATE2Q6UY27 113 aa10.7□□□□□ -0.7
CDC42-202ENST00000344548 SLC35E3Q7Z769 313 aa10.7□□□□□ -0.7
CDC42-202ENST00000344548 THAP8Q8NA92 274 aa10.7□□□□□ -0.7
CDC42-202ENST00000344548 OR5T1Q8NG75 326 aa10.7□□□□□ -0.7
CDC42-202ENST00000344548 ZNF503Q96F45 646 aa10.7□□□□□ -0.7
CDC42-202ENST00000344548 UHRF2Q96PU4 802 aa10.7□□□□□ -0.7
CDC42-202ENST00000344548 ITPR3Q14573 2671 aa10.7□□□□□ -0.7
CDC42-202ENST00000344548 MXRA5Q9NR99 2828 aa10.69□□□□□ -0.7
CDC42-202ENST00000344548 KIAA0141Q14154 515 aaPredicted RBP10.69□□□□□ -0.7
CDC42-202ENST00000344548 FAM90A2PQ658T7 463 aa10.69□□□□□ -0.7
CDC42-202ENST00000344548 BCL6BQ8N143 479 aaPredicted RBP10.69□□□□□ -0.7
CDC42-202ENST00000344548 LINC01356Q8N9X3 169 aa10.69□□□□□ -0.7
CDC42-202ENST00000344548 TMEM116Q8NCL8 245 aa10.69□□□□□ -0.7
CDC42-202ENST00000344548 TRAV5A0A0B4J249 113 aa10.69□□□□□ -0.7
CDC42-202ENST00000344548 TCRBV4S1A1TA0A5B7 111 aa10.69□□□□□ -0.7
CDC42-202ENST00000344548 UBE2G2P60604 165 aa10.69□□□□□ -0.7
CDC42-202ENST00000344548 AKIRIN2Q53H80 203 aa10.69□□□□□ -0.7
CDC42-202ENST00000344548 SPNS3Q6ZMD2 512 aa10.69□□□□□ -0.7
CDC42-202ENST00000344548 Q96MF0 132 aa10.69□□□□□ -0.7
CDC42-202ENST00000344548 SSX3Q99909 188 aa10.69□□□□□ -0.7
CDC42-202ENST00000344548 MEGF9Q9H1U4 602 aa10.69□□□□□ -0.7
CDC42-202ENST00000344548 BEX4Q9NWD9 120 aaPredicted RBP10.69□□□□□ -0.7
CDC42-202ENST00000344548 VAX2Q9UIW0 290 aa10.69□□□□□ -0.7
CDC42-202ENST00000344548 TLN2Q9Y4G6 2542 aa10.69□□□□□ -0.7
CDC42-202ENST00000344548 TRAV20A0A0B4J274 112 aa10.68□□□□□ -0.7
CDC42-202ENST00000344548 HLA-DRB1P01911 266 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms