RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 ANKRD17O75179 2603 aaKnown RBP17.83■□□□□ 0.44
PDLIM2-203ENST00000339162 NPFFO15130 113 aa17.83■□□□□ 0.44
PDLIM2-203ENST00000339162 ARL14EPLP0DKL9 152 aa17.83■□□□□ 0.44
PDLIM2-203ENST00000339162 TMEM11P17152 192 aa17.83■□□□□ 0.44
PDLIM2-203ENST00000339162 RND2P52198 227 aa17.83■□□□□ 0.44
PDLIM2-203ENST00000339162 ZNF114Q8NC26 417 aa17.83■□□□□ 0.44
PDLIM2-203ENST00000339162 ABCA12Q86UK0 2595 aa17.82■□□□□ 0.44
PDLIM2-203ENST00000339162 PAGE4O60829 102 aa17.82■□□□□ 0.44
PDLIM2-203ENST00000339162 CD81P60033 236 aa17.82■□□□□ 0.44
PDLIM2-203ENST00000339162 ZNF90Q03938 601 aa17.82■□□□□ 0.44
PDLIM2-203ENST00000339162 OR1P1Q8NH06 330 aa17.82■□□□□ 0.44
PDLIM2-203ENST00000339162 F11RQ9Y624 299 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-203ENST00000339162 UBE2G2P60604 165 aa17.82■□□□□ 0.44
PDLIM2-203ENST00000339162 FAM78BQ5VT40 261 aa17.82■□□□□ 0.44
PDLIM2-203ENST00000339162 Q8N6K4 173 aa17.82■□□□□ 0.44
PDLIM2-203ENST00000339162 RPS10P5Q9NQ39 176 aa17.82■□□□□ 0.44
PDLIM2-203ENST00000339162 PSMB3P49720 205 aa17.81■□□□□ 0.44
PDLIM2-203ENST00000339162 MEF2BQ02080 365 aaPredicted RBP17.81■□□□□ 0.44
PDLIM2-203ENST00000339162 BRD3OSQ6XYD6 125 aa17.81■□□□□ 0.44
PDLIM2-203ENST00000339162 H3BQ15 152 aa17.8■□□□□ 0.44
PDLIM2-203ENST00000339162 STAG3L2P0CL84 134 aa17.8■□□□□ 0.44
PDLIM2-203ENST00000339162 STAG3L3P0CL85 134 aa17.8■□□□□ 0.44
PDLIM2-203ENST00000339162 FAM90A2PQ658T7 463 aa17.8■□□□□ 0.44
PDLIM2-203ENST00000339162 MIR17HGQ75NE6 70 aa17.8■□□□□ 0.44
PDLIM2-203ENST00000339162 WNT10AQ9GZT5 417 aa17.8■□□□□ 0.44
PDLIM2-203ENST00000339162 IGKV1D-37A0A075B6S9 117 aa17.8■□□□□ 0.44
PDLIM2-203ENST00000339162 RHOBP62745 196 aa17.8■□□□□ 0.44
PDLIM2-203ENST00000339162 EBI3Q14213 229 aa17.8■□□□□ 0.44
PDLIM2-203ENST00000339162 CLEC12BQ2HXU8 276 aa17.8■□□□□ 0.44
PDLIM2-203ENST00000339162 PVRIGQ6DKI7 326 aa17.8■□□□□ 0.44
PDLIM2-203ENST00000339162 CYP2G1PQ6ZSU1 146 aa17.8■□□□□ 0.44
PDLIM2-203ENST00000339162 TENM4Q6N022 2769 aa17.8■□□□□ 0.44
PDLIM2-203ENST00000339162 TRAV40A0A0B4J280 105 aa17.79■□□□□ 0.44
PDLIM2-203ENST00000339162 C7orf77A4D0Y5 90 aa17.79■□□□□ 0.44
PDLIM2-203ENST00000339162 MT-CO2P00403 227 aa17.79■□□□□ 0.44
PDLIM2-203ENST00000339162 CX3CL1P78423 397 aa17.79■□□□□ 0.44
PDLIM2-203ENST00000339162 NDPQ00604 133 aa17.79■□□□□ 0.44
PDLIM2-203ENST00000339162 PMS2P11Q13670 270 aa17.79■□□□□ 0.44
PDLIM2-203ENST00000339162 KIAA0141Q14154 515 aaPredicted RBP17.79■□□□□ 0.44
PDLIM2-203ENST00000339162 SPNS3Q6ZMD2 512 aa17.79■□□□□ 0.44
PDLIM2-203ENST00000339162 FAM106CPP0CH98 169 aa17.79■□□□□ 0.44
PDLIM2-203ENST00000339162 KLF17Q5JT82 389 aaPredicted RBP17.79■□□□□ 0.44
PDLIM2-203ENST00000339162 OR4F5Q8NH21 305 aa17.79■□□□□ 0.44
PDLIM2-203ENST00000339162 OR4F4Q96R69 305 aa17.79■□□□□ 0.44
PDLIM2-203ENST00000339162 GSX1Q9H4S2 264 aaPredicted RBP17.79■□□□□ 0.44
PDLIM2-203ENST00000339162 DOK5Q9P104 306 aa17.79■□□□□ 0.44
PDLIM2-203ENST00000339162 TMEM37Q8WXS4 190 aa17.78■□□□□ 0.44
PDLIM2-203ENST00000339162 MANBALQ9NQG1 85 aa17.78■□□□□ 0.44
PDLIM2-203ENST00000339162 KMT2BQ9UMN6 2715 aaPredicted RBP17.78■□□□□ 0.44
PDLIM2-203ENST00000339162 CRYGCP07315 174 aa17.78■□□□□ 0.44
PDLIM2-203ENST00000339162 CXorf1O96002 111 aa17.77■□□□□ 0.44
PDLIM2-203ENST00000339162 ETFRF1Q6IPR1 90 aa17.77■□□□□ 0.44
PDLIM2-203ENST00000339162 MSMBP08118 114 aa17.76■□□□□ 0.43
PDLIM2-203ENST00000339162 IGHV4-38-2P0DP08 117 aa17.76■□□□□ 0.43
PDLIM2-203ENST00000339162 BRS3P32247 399 aa17.76■□□□□ 0.43
PDLIM2-203ENST00000339162 CST9LP1Q5W188 147 aa17.76■□□□□ 0.43
PDLIM2-203ENST00000339162 ZNF562Q6V9R5 426 aa17.76■□□□□ 0.43
PDLIM2-203ENST00000339162 LINC00518Q8N0U6 118 aa17.76■□□□□ 0.43
PDLIM2-203ENST00000339162 NIPSNAP3BQ9BS92 247 aa17.76■□□□□ 0.43
PDLIM2-203ENST00000339162 SOX21Q9Y651 276 aaPredicted RBP17.76■□□□□ 0.43
PDLIM2-203ENST00000339162 TCRBV4S1A1TA0A5B7 111 aa17.76■□□□□ 0.43
PDLIM2-203ENST00000339162 ATP5G3P48201 142 aa17.76■□□□□ 0.43
PDLIM2-203ENST00000339162 THAP8Q8NA92 274 aa17.76■□□□□ 0.43
PDLIM2-203ENST00000339162 MAPK1IP1LQ8NDC0 245 aa17.76■□□□□ 0.43
PDLIM2-203ENST00000339162 ARPC1AQ92747 370 aa17.76■□□□□ 0.43
PDLIM2-203ENST00000339162 C7orf69Q9H7B7 122 aa17.76■□□□□ 0.43
PDLIM2-203ENST00000339162 FUT9Q9Y231 359 aa17.76■□□□□ 0.43
PDLIM2-203ENST00000339162 IGHV1-69DA0A0B4J2H0 117 aa17.75■□□□□ 0.43
PDLIM2-203ENST00000339162 C11orf94C9JXX5 98 aa17.75■□□□□ 0.43
PDLIM2-203ENST00000339162 IGHV1-69P01742 117 aa17.75■□□□□ 0.43
PDLIM2-203ENST00000339162 ZNF674Q2M3X9 581 aa17.75■□□□□ 0.43
PDLIM2-203ENST00000339162 MORN5Q5VZ52 161 aa17.75■□□□□ 0.43
PDLIM2-203ENST00000339162 Q8N9W7 124 aa17.75■□□□□ 0.43
PDLIM2-203ENST00000339162 RPUSD4Q96CM3 377 aaKnown RBP17.75■□□□□ 0.43
PDLIM2-203ENST00000339162 TNFRSF19Q9NS68 423 aa17.75■□□□□ 0.43
PDLIM2-203ENST00000339162 PAX1P15863 534 aa17.75■□□□□ 0.43
PDLIM2-203ENST00000339162 ASPHD1Q5U4P2 390 aa17.75■□□□□ 0.43
PDLIM2-203ENST00000339162 CORTO00230 105 aa17.74■□□□□ 0.43
PDLIM2-203ENST00000339162 GCHFRP30047 84 aa17.74■□□□□ 0.43
PDLIM2-203ENST00000339162 TMEM249Q2WGJ8 235 aa17.74■□□□□ 0.43
PDLIM2-203ENST00000339162 OR51G1Q8NGK1 321 aa17.74■□□□□ 0.43
PDLIM2-203ENST00000339162 UHRF2Q96PU4 802 aa17.74■□□□□ 0.43
PDLIM2-203ENST00000339162 HIF1ANQ9NWT6 349 aa17.74■□□□□ 0.43
PDLIM2-203ENST00000339162 SH2D7A6NKC9 451 aaPredicted RBP17.74■□□□□ 0.43
PDLIM2-203ENST00000339162 I3L2K1 104 aa17.74■□□□□ 0.43
PDLIM2-203ENST00000339162 DSCR9P59020 149 aa17.74■□□□□ 0.43
PDLIM2-203ENST00000339162 TMEM116Q8NCL8 245 aa17.74■□□□□ 0.43
PDLIM2-203ENST00000339162 SRSF8Q9BRL6 282 aaKnown RBP17.74■□□□□ 0.43
PDLIM2-203ENST00000339162 MLXQ9UH92 298 aa17.74■□□□□ 0.43
PDLIM2-203ENST00000339162 S4R3C0 116 aa17.74■□□□□ 0.43
PDLIM2-203ENST00000339162 TRAV5A0A0B4J249 113 aa17.73■□□□□ 0.43
PDLIM2-203ENST00000339162 PSMB11A5LHX3 300 aa17.73■□□□□ 0.43
PDLIM2-203ENST00000339162 OR4X1Q8NH49 305 aa17.73■□□□□ 0.43
PDLIM2-203ENST00000339162 C22orf15Q8WYQ4 148 aa17.73■□□□□ 0.43
PDLIM2-203ENST00000339162 ISOC2Q96AB3 205 aa17.73■□□□□ 0.43
PDLIM2-203ENST00000339162 HSPB9Q9BQS6 159 aa17.73■□□□□ 0.43
PDLIM2-203ENST00000339162 IGHV7-81A0A0B4J1V7 117 aa17.72■□□□□ 0.43
PDLIM2-203ENST00000339162 A0A0U1RQK1 487 aa17.72■□□□□ 0.43
PDLIM2-203ENST00000339162 ZNF727A8MUV8 499 aa17.72■□□□□ 0.43
PDLIM2-203ENST00000339162 TVP23CQ96ET8 276 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms