RNA–Protein interactions for RNA: ENST00000330560.7

CDCA2-201, Transcript of cell division cycle associated 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCA2, Length 3,731 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA2-201ENST00000330560 C10orf113Q5VZT2 155 aa12.11□□□□□ -0.47
CDCA2-201ENST00000330560 SLC25A5P05141 298 aaKnown RBP12.11□□□□□ -0.47
CDCA2-201ENST00000330560 KDF1Q8NAX2 398 aaPredicted RBP12.11□□□□□ -0.47
CDCA2-201ENST00000330560 SLC25A33Q9BSK2 321 aa12.11□□□□□ -0.47
CDCA2-201ENST00000330560 ELOVL5Q9NYP7 299 aa12.11□□□□□ -0.47
CDCA2-201ENST00000330560 TET2Q6N021 2002 aaPredicted RBP12.11□□□□□ -0.47
CDCA2-201ENST00000330560 PTPN13Q12923 2485 aa12.1□□□□□ -0.47
CDCA2-201ENST00000330560 BATFQ16520 125 aa12.1□□□□□ -0.47
CDCA2-201ENST00000330560 HIST3H2BBQ8N257 126 aa12.1□□□□□ -0.47
CDCA2-201ENST00000330560 ANAPC16Q96DE5 110 aa12.1□□□□□ -0.47
CDCA2-201ENST00000330560 SRD5A3Q9H8P0 318 aa12.1□□□□□ -0.47
CDCA2-201ENST00000330560 FOXA2Q9Y261 457 aaPredicted RBP12.1□□□□□ -0.47
CDCA2-201ENST00000330560 IFITM10A6NMD0 228 aa12.1□□□□□ -0.47
CDCA2-201ENST00000330560 GATA4P43694 442 aa12.1□□□□□ -0.47
CDCA2-201ENST00000330560 UBE2G1P62253 170 aa12.1□□□□□ -0.47
CDCA2-201ENST00000330560 WT1-ASQ06250 92 aa12.1□□□□□ -0.47
CDCA2-201ENST00000330560 TMEM256Q8N2U0 113 aa12.1□□□□□ -0.47
CDCA2-201ENST00000330560 FAM169BQ8N8A8 192 aa12.1□□□□□ -0.47
CDCA2-201ENST00000330560 OR1P1Q8NH06 330 aa12.1□□□□□ -0.47
CDCA2-201ENST00000330560 PITPNC1Q9UKF7 332 aa12.1□□□□□ -0.47
CDCA2-201ENST00000330560 PFN1P07737 140 aaKnown RBP12.1□□□□□ -0.47
CDCA2-201ENST00000330560 PMCHP20382 165 aa12.1□□□□□ -0.47
CDCA2-201ENST00000330560 RPL27AP46776 148 aaKnown RBP12.1□□□□□ -0.47
CDCA2-201ENST00000330560 ZNF439Q8NDP4 499 aa12.1□□□□□ -0.47
CDCA2-201ENST00000330560 DDB2Q92466 427 aa12.1□□□□□ -0.47
CDCA2-201ENST00000330560 HIST1H2BLQ99880 126 aa12.1□□□□□ -0.47
CDCA2-201ENST00000330560 TNFRSF19Q9NS68 423 aa12.1□□□□□ -0.47
CDCA2-201ENST00000330560 CCDC168Q8NDH2 2452 aa12.09□□□□□ -0.47
CDCA2-201ENST00000330560 PPOXP50336 477 aa12.09□□□□□ -0.47
CDCA2-201ENST00000330560 OR1L6Q8NGR2 347 aa12.09□□□□□ -0.47
CDCA2-201ENST00000330560 DNAJC4Q9NNZ3 241 aa12.09□□□□□ -0.47
CDCA2-201ENST00000330560 LRRK2Q5S007 2527 aa12.09□□□□□ -0.47
CDCA2-201ENST00000330560 LOXP28300 417 aaPredicted RBP12.09□□□□□ -0.47
CDCA2-201ENST00000330560 TMEM144Q7Z5S9 345 aa12.09□□□□□ -0.47
CDCA2-201ENST00000330560 VSTM2AQ8TAG5 236 aa12.09□□□□□ -0.47
CDCA2-201ENST00000330560 PAXXQ9BUH6 204 aa12.09□□□□□ -0.47
CDCA2-201ENST00000330560 IGHV3OR16-10A0A075B7F0 116 aa12.09□□□□□ -0.47
CDCA2-201ENST00000330560 NDUFS7O75251 213 aa12.09□□□□□ -0.47
CDCA2-201ENST00000330560 LINC00305Q7Z4B0 112 aa12.09□□□□□ -0.47
CDCA2-201ENST00000330560 OR5B3Q8NH48 314 aa12.09□□□□□ -0.47
CDCA2-201ENST00000330560 COL27A1Q8IZC6 1860 aaPredicted RBP12.08□□□□□ -0.47
CDCA2-201ENST00000330560 USP9XQ93008 2570 aaPredicted RBP12.08□□□□□ -0.48
CDCA2-201ENST00000330560 TSTD3H0UI37 97 aa12.08□□□□□ -0.48
CDCA2-201ENST00000330560 DLL1O00548 723 aa12.08□□□□□ -0.48
CDCA2-201ENST00000330560 IGHV1-8P0DP01 117 aa12.08□□□□□ -0.48
CDCA2-201ENST00000330560 RNASE2P10153 161 aaKnown RBP12.08□□□□□ -0.48
CDCA2-201ENST00000330560 USF1P22415 310 aaPredicted RBP12.08□□□□□ -0.48
CDCA2-201ENST00000330560 CNN1P51911 297 aaKnown RBP12.08□□□□□ -0.48
CDCA2-201ENST00000330560 CD69Q07108 199 aa12.08□□□□□ -0.48
CDCA2-201ENST00000330560 OSR1Q8TAX0 266 aaPredicted RBP12.08□□□□□ -0.48
CDCA2-201ENST00000330560 NOTCH2Q04721 2471 aa12.08□□□□□ -0.48
CDCA2-201ENST00000330560 C8orf88P0DMB2 117 aa12.08□□□□□ -0.48
CDCA2-201ENST00000330560 CGB3P0DN86 165 aa12.08□□□□□ -0.48
CDCA2-201ENST00000330560 CGB7P0DN87 165 aa12.08□□□□□ -0.48
CDCA2-201ENST00000330560 EAF1Q96JC9 268 aaPredicted RBP12.08□□□□□ -0.48
CDCA2-201ENST00000330560 OR51M1Q9H341 326 aa12.08□□□□□ -0.48
CDCA2-201ENST00000330560 UBTD1Q9HAC8 227 aa12.08□□□□□ -0.48
CDCA2-201ENST00000330560 TMEM11P17152 192 aa12.08□□□□□ -0.48
CDCA2-201ENST00000330560 PRRX1P54821 245 aa12.08□□□□□ -0.48
CDCA2-201ENST00000330560 OR52E5Q8NH55 327 aa12.08□□□□□ -0.48
CDCA2-201ENST00000330560 FNDC4Q9H6D8 234 aaPredicted RBP12.08□□□□□ -0.48
CDCA2-201ENST00000330560 MRPL36Q9P0J6 103 aaKnown RBP12.08□□□□□ -0.48
CDCA2-201ENST00000330560 PKD1L2Q7Z442 2459 aa12.07□□□□□ -0.48
CDCA2-201ENST00000330560 PGPA6NDG6 321 aa12.07□□□□□ -0.48
CDCA2-201ENST00000330560 H0Y8G0 127 aa12.07□□□□□ -0.48
CDCA2-201ENST00000330560 TDGF1P3P51864 188 aa12.07□□□□□ -0.48
CDCA2-201ENST00000330560 CYB5R2Q6BCY4 276 aa12.07□□□□□ -0.48
CDCA2-201ENST00000330560 MMD2Q8IY49 270 aa12.07□□□□□ -0.48
CDCA2-201ENST00000330560 NUP37Q8NFH4 326 aa12.07□□□□□ -0.48
CDCA2-201ENST00000330560 TRBV24-1A0A075B6N3 115 aa12.07□□□□□ -0.48
CDCA2-201ENST00000330560 KRTDAPP60985 99 aa12.07□□□□□ -0.48
CDCA2-201ENST00000330560 CDSNQ15517 529 aa12.07□□□□□ -0.48
CDCA2-201ENST00000330560 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.07□□□□□ -0.48
CDCA2-201ENST00000330560 TMEM18Q96B42 140 aa12.07□□□□□ -0.48
CDCA2-201ENST00000330560 TMEM186Q96B77 213 aa12.07□□□□□ -0.48
CDCA2-201ENST00000330560 COL25A1Q9BXS0 654 aaPredicted RBP12.07□□□□□ -0.48
CDCA2-201ENST00000330560 TMEM133Q9H2Q1 129 aa12.07□□□□□ -0.48
CDCA2-201ENST00000330560 TMEM167BQ9NRX6 74 aa12.07□□□□□ -0.48
CDCA2-201ENST00000330560 SHISA9B4DS77 424 aa12.07□□□□□ -0.48
CDCA2-201ENST00000330560 K7ENP7 123 aa12.07□□□□□ -0.48
CDCA2-201ENST00000330560 ZNF672Q499Z4 452 aaPredicted RBP12.07□□□□□ -0.48
CDCA2-201ENST00000330560 TEX38Q6PEX7 206 aa12.07□□□□□ -0.48
CDCA2-201ENST00000330560 TIMD4Q96H15 378 aa12.07□□□□□ -0.48
CDCA2-201ENST00000330560 DIRC2Q96SL1 478 aa12.07□□□□□ -0.48
CDCA2-201ENST00000330560 KLF2Q9Y5W3 355 aaPredicted RBP12.07□□□□□ -0.48
CDCA2-201ENST00000330560 A0A1W2PPI3 338 aa12.06□□□□□ -0.48
CDCA2-201ENST00000330560 CRISP2P16562 243 aa12.06□□□□□ -0.48
CDCA2-201ENST00000330560 RPL29P47914 159 aaKnown RBP12.06□□□□□ -0.48
CDCA2-201ENST00000330560 FAM222BQ8WU58 562 aa12.06□□□□□ -0.48
CDCA2-201ENST00000330560 MS4A10Q96PG2 267 aa12.06□□□□□ -0.48
CDCA2-201ENST00000330560 AMMECR1Q9Y4X0 333 aaPredicted RBP12.06□□□□□ -0.48
CDCA2-201ENST00000330560 A0A1W2PN81 502 aa12.06□□□□□ -0.48
CDCA2-201ENST00000330560 BPIFB3P59826 476 aa12.06□□□□□ -0.48
CDCA2-201ENST00000330560 OR8B3Q8NGG8 313 aa12.06□□□□□ -0.48
CDCA2-201ENST00000330560 OR8B2Q96RD0 313 aa12.06□□□□□ -0.48
CDCA2-201ENST00000330560 IGHV3OR16-13A0A075B7E8 117 aa12.06□□□□□ -0.48
CDCA2-201ENST00000330560 IGHV3-74A0A0B4J1X5 117 aa12.06□□□□□ -0.48
CDCA2-201ENST00000330560 AMBPP02760 352 aa12.06□□□□□ -0.48
CDCA2-201ENST00000330560 RPEL1Q2QD12 228 aa12.06□□□□□ -0.48
CDCA2-201ENST00000330560 IGHV2-26A0A0B4J1V2 119 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms