RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 V9GYV3 84 aa14.1□□□□□ -0.15
COL9A1-201ENST00000320755 C9JCJ5 164 aa14.09□□□□□ -0.15
COL9A1-201ENST00000320755 DLL1O00548 723 aa14.09□□□□□ -0.15
COL9A1-201ENST00000320755 LGALS4P56470 323 aa14.09□□□□□ -0.15
COL9A1-201ENST00000320755 MEF2CQ06413 473 aaPredicted RBP14.09□□□□□ -0.15
COL9A1-201ENST00000320755 ST6GALNAC3Q8NDV1 305 aa14.09□□□□□ -0.15
COL9A1-201ENST00000320755 DNAJC4Q9NNZ3 241 aa14.09□□□□□ -0.15
COL9A1-201ENST00000320755 MED13LQ71F56 2210 aa14.09□□□□□ -0.15
COL9A1-201ENST00000320755 A8MWP6 167 aa14.09□□□□□ -0.15
COL9A1-201ENST00000320755 LYNX1G3V0Z9 82 aa14.09□□□□□ -0.15
COL9A1-201ENST00000320755 COX7A2P2O60397 106 aa14.09□□□□□ -0.15
COL9A1-201ENST00000320755 LYNX1P0DP58 116 aa14.09□□□□□ -0.15
COL9A1-201ENST00000320755 YPEL3P61236 119 aaPredicted RBP14.09□□□□□ -0.15
COL9A1-201ENST00000320755 SSX2Q16385 188 aa14.09□□□□□ -0.15
COL9A1-201ENST00000320755 SGK494Q96LW2 274 aa14.09□□□□□ -0.15
COL9A1-201ENST00000320755 MRPL36Q9P0J6 103 aaKnown RBP14.09□□□□□ -0.15
COL9A1-201ENST00000320755 TRAV34A0A0B4J273 112 aa14.09□□□□□ -0.15
COL9A1-201ENST00000320755 IQCJQ1A5X6 159 aa14.09□□□□□ -0.15
COL9A1-201ENST00000320755 MRPL54Q6P161 138 aaKnown RBP14.09□□□□□ -0.15
COL9A1-201ENST00000320755 TGIF2LXQ8IUE1 241 aa14.09□□□□□ -0.15
COL9A1-201ENST00000320755 NAT8BQ9UHF3 227 aa14.09□□□□□ -0.15
COL9A1-201ENST00000320755 PTPRQQ9UMZ3 2332 aa14.08□□□□□ -0.15
COL9A1-201ENST00000320755 FNDC10F2Z333 226 aa14.08□□□□□ -0.16
COL9A1-201ENST00000320755 SERF1AO75920 110 aa14.08□□□□□ -0.16
COL9A1-201ENST00000320755 USF1P22415 310 aaPredicted RBP14.08□□□□□ -0.16
COL9A1-201ENST00000320755 SSBP3Q9BWW4 388 aaPredicted RBP14.08□□□□□ -0.16
COL9A1-201ENST00000320755 RNASE6Q93091 150 aaKnown RBP14.08□□□□□ -0.16
COL9A1-201ENST00000320755 ZNF355PQ9NSJ1 428 aa14.08□□□□□ -0.16
COL9A1-201ENST00000320755 TP53TG3Q9ULZ0 132 aa14.08□□□□□ -0.16
COL9A1-201ENST00000320755 ANKHD1Q8IWZ3 2542 aaKnown RBP14.07□□□□□ -0.16
COL9A1-201ENST00000320755 RNF224P0DH78 156 aa14.07□□□□□ -0.16
COL9A1-201ENST00000320755 TMEM177Q53S58 311 aa14.07□□□□□ -0.16
COL9A1-201ENST00000320755 ATRXP46100 2492 aa14.07□□□□□ -0.16
COL9A1-201ENST00000320755 CGB1A6NKQ9 187 aa14.07□□□□□ -0.16
COL9A1-201ENST00000320755 ORM2P19652 201 aa14.07□□□□□ -0.16
COL9A1-201ENST00000320755 MISP3Q96FF7 219 aa14.07□□□□□ -0.16
COL9A1-201ENST00000320755 FAM103A1Q9BTL3 118 aaKnown RBP14.07□□□□□ -0.16
COL9A1-201ENST00000320755 SLC25A2Q9BXI2 301 aa14.07□□□□□ -0.16
COL9A1-201ENST00000320755 MOSP00540 346 aa14.06□□□□□ -0.16
COL9A1-201ENST00000320755 TMEM30BQ3MIR4 351 aa14.06□□□□□ -0.16
COL9A1-201ENST00000320755 RPH3ALQ9UNE2 315 aa14.06□□□□□ -0.16
COL9A1-201ENST00000320755 IGF2RP11717 2491 aa14.06□□□□□ -0.16
COL9A1-201ENST00000320755 LOXP28300 417 aaPredicted RBP14.06□□□□□ -0.16
COL9A1-201ENST00000320755 C10orf113Q5VZT2 155 aa14.06□□□□□ -0.16
COL9A1-201ENST00000320755 RUSC1-AS1Q66K80 236 aa14.06□□□□□ -0.16
COL9A1-201ENST00000320755 PRR27Q6MZM9 219 aa14.06□□□□□ -0.16
COL9A1-201ENST00000320755 SAMD10Q9BYL1 202 aa14.06□□□□□ -0.16
COL9A1-201ENST00000320755 WASHC3Q9Y3C0 194 aa14.06□□□□□ -0.16
COL9A1-201ENST00000320755 TDGF1P3P51864 188 aa14.06□□□□□ -0.16
COL9A1-201ENST00000320755 IBA57Q5T440 356 aaKnown RBP14.06□□□□□ -0.16
COL9A1-201ENST00000320755 Q8NA96 180 aa14.06□□□□□ -0.16
COL9A1-201ENST00000320755 BLNKQ8WV28 456 aa14.06□□□□□ -0.16
COL9A1-201ENST00000320755 CACNG8Q8WXS5 425 aa14.06□□□□□ -0.16
COL9A1-201ENST00000320755 FAM167A-AS1Q96KT0 104 aa14.06□□□□□ -0.16
COL9A1-201ENST00000320755 NAGKQ9UJ70 344 aa14.06□□□□□ -0.16
COL9A1-201ENST00000320755 ZZEF1O43149 2961 aa14.05□□□□□ -0.16
COL9A1-201ENST00000320755 CNTFRP26992 372 aa14.05□□□□□ -0.16
COL9A1-201ENST00000320755 RANP62826 216 aaKnown RBP14.05□□□□□ -0.16
COL9A1-201ENST00000320755 TMEM167AQ8TBQ9 72 aa14.05□□□□□ -0.16
COL9A1-201ENST00000320755 HSPB9Q9BQS6 159 aa14.05□□□□□ -0.16
COL9A1-201ENST00000320755 A0A1W2PN81 502 aa14.05□□□□□ -0.16
COL9A1-201ENST00000320755 VSTM5A8MXK1 200 aa14.05□□□□□ -0.16
COL9A1-201ENST00000320755 E7EQL1 145 aa14.05□□□□□ -0.16
COL9A1-201ENST00000320755 PRR31Q5SQ13 230 aa14.05□□□□□ -0.16
COL9A1-201ENST00000320755 PATE2Q6UY27 113 aa14.05□□□□□ -0.16
COL9A1-201ENST00000320755 VSTM2AQ8TAG5 236 aa14.05□□□□□ -0.16
COL9A1-201ENST00000320755 FAM168AQ92567 244 aa14.05□□□□□ -0.16
COL9A1-201ENST00000320755 TMEM186Q96B77 213 aa14.05□□□□□ -0.16
COL9A1-201ENST00000320755 TBX15Q96SF7 602 aa14.05□□□□□ -0.16
COL9A1-201ENST00000320755 PAXXQ9BUH6 204 aa14.05□□□□□ -0.16
COL9A1-201ENST00000320755 A0A1W2PPI3 338 aa14.04□□□□□ -0.16
COL9A1-201ENST00000320755 H3BTX0 84 aa14.04□□□□□ -0.16
COL9A1-201ENST00000320755 LINC00310P59036 64 aa14.04□□□□□ -0.16
COL9A1-201ENST00000320755 TOMM20LQ6UXN7 152 aa14.04□□□□□ -0.16
COL9A1-201ENST00000320755 AMMECR1Q9Y4X0 333 aaPredicted RBP14.04□□□□□ -0.16
COL9A1-201ENST00000320755 IGLV2-23P01705 113 aa14.04□□□□□ -0.16
COL9A1-201ENST00000320755 SUB1P53999 127 aaKnown RBP eCLIP14.04□□□□□ -0.16
COL9A1-201ENST00000320755 PDPNQ86YL7 162 aa14.04□□□□□ -0.16
COL9A1-201ENST00000320755 NOL4LQ96MY1 436 aaPredicted RBP14.04□□□□□ -0.16
COL9A1-201ENST00000320755 CBLN4Q9NTU7 201 aa14.04□□□□□ -0.16
COL9A1-201ENST00000320755 SSUH2Q9Y2M2 353 aa14.04□□□□□ -0.16
COL9A1-201ENST00000320755 LY96Q9Y6Y9 160 aa14.04□□□□□ -0.16
COL9A1-201ENST00000320755 ARHGAP32A7KAX9 2087 aa14.04□□□□□ -0.16
COL9A1-201ENST00000320755 A0A1W2PRE2 83 aa14.04□□□□□ -0.16
COL9A1-201ENST00000320755 GNG5P63218 68 aa14.04□□□□□ -0.16
COL9A1-201ENST00000320755 TNXAQ16473 311 aa14.04□□□□□ -0.16
COL9A1-201ENST00000320755 VMA21Q3ZAQ7 101 aa14.04□□□□□ -0.16
COL9A1-201ENST00000320755 ZNF600Q6ZNG1 722 aa14.04□□□□□ -0.16
COL9A1-201ENST00000320755 Q6ZWC4 215 aa14.04□□□□□ -0.16
COL9A1-201ENST00000320755 OR1B1Q8NGR6 318 aa14.04□□□□□ -0.16
COL9A1-201ENST00000320755 C19orf24Q9BVV8 132 aa14.04□□□□□ -0.16
COL9A1-201ENST00000320755 DCHS2Q6V1P9 2916 aa14.03□□□□□ -0.16
COL9A1-201ENST00000320755 IGLV2-8P01709 118 aa14.03□□□□□ -0.16
COL9A1-201ENST00000320755 ATP5IP56385 69 aaPredicted RBP14.03□□□□□ -0.16
COL9A1-201ENST00000320755 TDRG1Q3Y452 100 aa14.03□□□□□ -0.16
COL9A1-201ENST00000320755 PRSS33Q8NF86 280 aa14.03□□□□□ -0.16
COL9A1-201ENST00000320755 GSX1Q9H4S2 264 aaPredicted RBP14.03□□□□□ -0.16
COL9A1-201ENST00000320755 POLR3KQ9Y2Y1 108 aaPredicted RBP14.03□□□□□ -0.16
COL9A1-201ENST00000320755 COL6A6A6NMZ7 2263 aa14.03□□□□□ -0.16
COL9A1-201ENST00000320755 SPTBN1Q01082 2364 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms