RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 TRAV40A0A0B4J280 105 aa14.13□□□□□ -0.15
RAB39A-201ENST00000320578 ZFP92A6NM28 416 aa14.13□□□□□ -0.15
RAB39A-201ENST00000320578 I3L2K1 104 aa14.13□□□□□ -0.15
RAB39A-201ENST00000320578 CXorf1O96002 111 aa14.13□□□□□ -0.15
RAB39A-201ENST00000320578 MT-CO2P00403 227 aa14.13□□□□□ -0.15
RAB39A-201ENST00000320578 BPIFB3P59826 476 aa14.13□□□□□ -0.15
RAB39A-201ENST00000320578 ATRAIDQ6UW56 229 aa14.13□□□□□ -0.15
RAB39A-201ENST00000320578 GATAD1Q8WUU5 269 aa14.13□□□□□ -0.15
RAB39A-201ENST00000320578 SLC25A33Q9BSK2 321 aa14.13□□□□□ -0.15
RAB39A-201ENST00000320578 DMRT1Q9Y5R6 373 aa14.13□□□□□ -0.15
RAB39A-201ENST00000320578 ABCA2Q9BZC7 2435 aa14.13□□□□□ -0.15
RAB39A-201ENST00000320578 FBP1P09467 338 aa14.13□□□□□ -0.15
RAB39A-201ENST00000320578 RND2P52198 227 aa14.13□□□□□ -0.15
RAB39A-201ENST00000320578 KLK9Q2XQG4 91 aa14.13□□□□□ -0.15
RAB39A-201ENST00000320578 RASL11BQ9BPW5 248 aa14.13□□□□□ -0.15
RAB39A-201ENST00000320578 TXNDC17Q9BRA2 123 aa14.13□□□□□ -0.15
RAB39A-201ENST00000320578 KLK9Q9UKQ9 250 aa14.13□□□□□ -0.15
RAB39A-201ENST00000320578 IGHV7-81A0A0B4J1V7 117 aa14.12□□□□□ -0.15
RAB39A-201ENST00000320578 OR5G3P0C626 314 aa14.12□□□□□ -0.15
RAB39A-201ENST00000320578 OR4X1Q8NH49 305 aa14.12□□□□□ -0.15
RAB39A-201ENST00000320578 TMEM68Q96MH6 324 aa14.12□□□□□ -0.15
RAB39A-201ENST00000320578 MRPL32Q9BYC8 188 aaKnown RBP14.12□□□□□ -0.15
RAB39A-201ENST00000320578 FUT9Q9Y231 359 aa14.12□□□□□ -0.15
RAB39A-201ENST00000320578 PSMB11A5LHX3 300 aa14.11□□□□□ -0.15
RAB39A-201ENST00000320578 DEFA4P12838 97 aa14.11□□□□□ -0.15
RAB39A-201ENST00000320578 ASPHD1Q5U4P2 390 aa14.11□□□□□ -0.15
RAB39A-201ENST00000320578 RUSC1-AS1Q66K80 236 aa14.11□□□□□ -0.15
RAB39A-201ENST00000320578 CLRN3Q8NCR9 226 aa14.11□□□□□ -0.15
RAB39A-201ENST00000320578 OR1L4Q8NGR5 311 aa14.11□□□□□ -0.15
RAB39A-201ENST00000320578 SUN5Q8TC36 379 aa14.11□□□□□ -0.15
RAB39A-201ENST00000320578 MRPL36Q9P0J6 103 aaKnown RBP14.11□□□□□ -0.15
RAB39A-201ENST00000320578 PLXNB1O43157 2135 aa14.11□□□□□ -0.15
RAB39A-201ENST00000320578 TMEM250H0YL14 139 aa14.11□□□□□ -0.15
RAB39A-201ENST00000320578 HMGB3O15347 200 aaKnown RBP14.11□□□□□ -0.15
RAB39A-201ENST00000320578 IGHV4-38-2P0DP08 117 aa14.11□□□□□ -0.15
RAB39A-201ENST00000320578 MEF2BQ02080 365 aaPredicted RBP14.11□□□□□ -0.15
RAB39A-201ENST00000320578 PIFOQ8TCI5 191 aa14.11□□□□□ -0.15
RAB39A-201ENST00000320578 RBM14Q96PK6 669 aaKnown RBP14.11□□□□□ -0.15
RAB39A-201ENST00000320578 PFDN5Q99471 154 aa14.11□□□□□ -0.15
RAB39A-201ENST00000320578 TMPRSS5Q9H3S3 457 aa14.11□□□□□ -0.15
RAB39A-201ENST00000320578 SEPSECSQ9HD40 501 aaKnown RBP14.11□□□□□ -0.15
RAB39A-201ENST00000320578 TNFRSF19Q9NS68 423 aa14.11□□□□□ -0.15
RAB39A-201ENST00000320578 USP9YO00507 2555 aaPredicted RBP14.1□□□□□ -0.15
RAB39A-201ENST00000320578 APELAP0DMC3 54 aa14.1□□□□□ -0.15
RAB39A-201ENST00000320578 EGR2P11161 476 aaPredicted RBP14.1□□□□□ -0.15
RAB39A-201ENST00000320578 NDPQ00604 133 aa14.1□□□□□ -0.15
RAB39A-201ENST00000320578 SPNS3Q6ZMD2 512 aa14.1□□□□□ -0.15
RAB39A-201ENST00000320578 CYB561D1Q8N8Q1 229 aa14.1□□□□□ -0.15
RAB39A-201ENST00000320578 DNAJC4Q9NNZ3 241 aa14.1□□□□□ -0.15
RAB39A-201ENST00000320578 TECRQ9NZ01 308 aaKnown RBP14.1□□□□□ -0.15
RAB39A-201ENST00000320578 ARL2-SNX15V9GYD0 113 aa14.1□□□□□ -0.15
RAB39A-201ENST00000320578 NAV3Q8IVL0 2385 aa14.09□□□□□ -0.15
RAB39A-201ENST00000320578 TACC2O95359 2948 aa14.09□□□□□ -0.15
RAB39A-201ENST00000320578 IGLV11-55A0A075B6I3 123 aa14.09□□□□□ -0.15
RAB39A-201ENST00000320578 A0A0U1RQK1 487 aa14.09□□□□□ -0.15
RAB39A-201ENST00000320578 K7EIM0 57 aa14.09□□□□□ -0.15
RAB39A-201ENST00000320578 TAS2R45P59539 299 aa14.09□□□□□ -0.15
RAB39A-201ENST00000320578 PLP1P60201 277 aa14.09□□□□□ -0.15
RAB39A-201ENST00000320578 FAM78BQ5VT40 261 aa14.09□□□□□ -0.15
RAB39A-201ENST00000320578 SGMS2Q8NHU3 365 aa14.09□□□□□ -0.15
RAB39A-201ENST00000320578 ZNF48Q96MX3 618 aaPredicted RBP14.09□□□□□ -0.15
RAB39A-201ENST00000320578 CHD6Q8TD26 2715 aa14.09□□□□□ -0.15
RAB39A-201ENST00000320578 ELOA3CA0A087WX78 387 aaPredicted RBP14.08□□□□□ -0.15
RAB39A-201ENST00000320578 CLN5O75503 358 aa14.08□□□□□ -0.15
RAB39A-201ENST00000320578 ARL14EPLP0DKL9 152 aa14.08□□□□□ -0.15
RAB39A-201ENST00000320578 CD81P60033 236 aa14.08□□□□□ -0.15
RAB39A-201ENST00000320578 BTN1A1Q13410 526 aa14.08□□□□□ -0.15
RAB39A-201ENST00000320578 KLF17Q5JT82 389 aaPredicted RBP14.08□□□□□ -0.15
RAB39A-201ENST00000320578 PQLC2Q6ZP29 291 aa14.08□□□□□ -0.15
RAB39A-201ENST00000320578 C19orf35Q6ZS72 473 aa14.08□□□□□ -0.15
RAB39A-201ENST00000320578 C5orf56Q8N8D9 126 aa14.08□□□□□ -0.15
RAB39A-201ENST00000320578 FAM103A1Q9BTL3 118 aaKnown RBP14.08□□□□□ -0.15
RAB39A-201ENST00000320578 MOB4Q9Y3A3 225 aa14.08□□□□□ -0.15
RAB39A-201ENST00000320578 EIF3GO75821 320 aaKnown RBP eCLIP14.08□□□□□ -0.16
RAB39A-201ENST00000320578 HIST1H1BP16401 226 aaKnown RBP14.08□□□□□ -0.16
RAB39A-201ENST00000320578 GATA2P23769 480 aaPredicted RBP14.08□□□□□ -0.16
RAB39A-201ENST00000320578 NPBWR1P48145 328 aa14.08□□□□□ -0.16
RAB39A-201ENST00000320578 Q5PR19 223 aa14.08□□□□□ -0.16
RAB39A-201ENST00000320578 BRD3OSQ6XYD6 125 aa14.08□□□□□ -0.16
RAB39A-201ENST00000320578 TMEM37Q8WXS4 190 aa14.08□□□□□ -0.16
RAB39A-201ENST00000320578 FANCD2OSQ96PS1 177 aa14.08□□□□□ -0.16
RAB39A-201ENST00000320578 THYN1Q9P016 225 aa14.08□□□□□ -0.16
RAB39A-201ENST00000320578 IGHV3OR16-10A0A075B7F0 116 aa14.07□□□□□ -0.16
RAB39A-201ENST00000320578 FABP1P07148 127 aa14.07□□□□□ -0.16
RAB39A-201ENST00000320578 GCHFRP30047 84 aa14.07□□□□□ -0.16
RAB39A-201ENST00000320578 ZNF90Q03938 601 aa14.07□□□□□ -0.16
RAB39A-201ENST00000320578 FAM74A3Q4VXF1 159 aa14.07□□□□□ -0.16
RAB39A-201ENST00000320578 FAM90A2PQ658T7 463 aa14.07□□□□□ -0.16
RAB39A-201ENST00000320578 TMEM167BQ9NRX6 74 aa14.07□□□□□ -0.16
RAB39A-201ENST00000320578 DNASE2O00115 360 aaPredicted RBP14.06□□□□□ -0.16
RAB39A-201ENST00000320578 PAGE4O60829 102 aa14.06□□□□□ -0.16
RAB39A-201ENST00000320578 AVPP01185 164 aa14.06□□□□□ -0.16
RAB39A-201ENST00000320578 IGLC1P0CG04 106 aa14.06□□□□□ -0.16
RAB39A-201ENST00000320578 C8orf88P0DMB2 117 aa14.06□□□□□ -0.16
RAB39A-201ENST00000320578 RHEBQ15382 184 aa14.06□□□□□ -0.16
RAB39A-201ENST00000320578 SPATA31B1PQ5VZV4 182 aa14.06□□□□□ -0.16
RAB39A-201ENST00000320578 MIR17HGQ75NE6 70 aa14.06□□□□□ -0.16
RAB39A-201ENST00000320578 FAM110DQ8TAY7 271 aaPredicted RBP14.06□□□□□ -0.16
RAB39A-201ENST00000320578 FBN2P35556 2912 aa14.06□□□□□ -0.16
RAB39A-201ENST00000320578 TRAV30A0A087WSZ9 112 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms