RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 TRBV24-1A0A075B6N3 115 aa14.27□□□□□ -0.13
GABRB3-202ENST00000311550 SRSF6Q13247 344 aaKnown RBP14.27□□□□□ -0.13
GABRB3-202ENST00000311550 TCF24Q7RTU0 167 aa14.26□□□□□ -0.13
GABRB3-202ENST00000311550 IZUMO1RA6ND01 250 aa14.26□□□□□ -0.13
GABRB3-202ENST00000311550 WIPF3A6NGB9 483 aa14.26□□□□□ -0.13
GABRB3-202ENST00000311550 SH2D7A6NKC9 451 aaPredicted RBP14.26□□□□□ -0.13
GABRB3-202ENST00000311550 MYOD1P15172 320 aa14.26□□□□□ -0.13
GABRB3-202ENST00000311550 CD69Q07108 199 aa14.26□□□□□ -0.13
GABRB3-202ENST00000311550 CLEC2AQ6UVW9 174 aa14.26□□□□□ -0.13
GABRB3-202ENST00000311550 ETV2O00321 342 aaPredicted RBP14.26□□□□□ -0.13
GABRB3-202ENST00000311550 ID1P41134 155 aa14.26□□□□□ -0.13
GABRB3-202ENST00000311550 COQ2Q96H96 371 aa14.26□□□□□ -0.13
GABRB3-202ENST00000311550 SNAI2O43623 268 aa14.26□□□□□ -0.13
GABRB3-202ENST00000311550 GCSHP23434 173 aa14.26□□□□□ -0.13
GABRB3-202ENST00000311550 TIMP3P35625 211 aa14.26□□□□□ -0.13
GABRB3-202ENST00000311550 TAS2R60P59551 318 aa14.26□□□□□ -0.13
GABRB3-202ENST00000311550 NRN1Q9NPD7 142 aa14.26□□□□□ -0.13
GABRB3-202ENST00000311550 SEPSECSQ9HD40 501 aaKnown RBP14.25□□□□□ -0.13
GABRB3-202ENST00000311550 GAGE10A6NGK3 116 aa14.25□□□□□ -0.13
GABRB3-202ENST00000311550 RPS20P60866 119 aaKnown RBP14.25□□□□□ -0.13
GABRB3-202ENST00000311550 MDS2Q8NDY4 140 aa14.25□□□□□ -0.13
GABRB3-202ENST00000311550 PROK2Q9HC23 129 aa14.25□□□□□ -0.13
GABRB3-202ENST00000311550 DIDO1Q9BTC0 2240 aaKnown RBP14.25□□□□□ -0.13
GABRB3-202ENST00000311550 RPL13AP40429 203 aaKnown RBP14.25□□□□□ -0.13
GABRB3-202ENST00000311550 TMEM136Q6ZRR5 245 aa14.25□□□□□ -0.13
GABRB3-202ENST00000311550 COL25A1Q9BXS0 654 aaPredicted RBP14.25□□□□□ -0.13
GABRB3-202ENST00000311550 TMEM242Q9NWH2 141 aa14.25□□□□□ -0.13
GABRB3-202ENST00000311550 NUDT3O95989 172 aa14.24□□□□□ -0.13
GABRB3-202ENST00000311550 COTL1Q14019 142 aa14.24□□□□□ -0.13
GABRB3-202ENST00000311550 C18orf15Q96N68 181 aa14.24□□□□□ -0.13
GABRB3-202ENST00000311550 GPR82Q96P67 336 aa14.24□□□□□ -0.13
GABRB3-202ENST00000311550 C7orf71A4D174 169 aa14.24□□□□□ -0.13
GABRB3-202ENST00000311550 MLNRO43193 412 aa14.24□□□□□ -0.13
GABRB3-202ENST00000311550 AMBPP02760 352 aa14.24□□□□□ -0.13
GABRB3-202ENST00000311550 STAG3L2P0CL84 134 aa14.24□□□□□ -0.13
GABRB3-202ENST00000311550 STAG3L3P0CL85 134 aa14.24□□□□□ -0.13
GABRB3-202ENST00000311550 PHLDA3Q9Y5J5 127 aa14.24□□□□□ -0.13
GABRB3-202ENST00000311550 APOHP02749 345 aaPredicted RBP14.24□□□□□ -0.13
GABRB3-202ENST00000311550 PRR31Q5SQ13 230 aa14.24□□□□□ -0.13
GABRB3-202ENST00000311550 MGST2Q99735 147 aa14.24□□□□□ -0.13
GABRB3-202ENST00000311550 TRAV9-1A0A075B6T8 112 aa14.24□□□□□ -0.13
GABRB3-202ENST00000311550 TRBV6-6A0A0A6YYG2 114 aa14.24□□□□□ -0.13
GABRB3-202ENST00000311550 NPPCP23582 126 aa14.24□□□□□ -0.13
GABRB3-202ENST00000311550 A0A1B0GUT8 65 aa14.24□□□□□ -0.13
GABRB3-202ENST00000311550 FOXH1O75593 365 aa14.24□□□□□ -0.13
GABRB3-202ENST00000311550 ATP5G2Q06055 141 aa14.24□□□□□ -0.13
GABRB3-202ENST00000311550 SPSB3Q6PJ21 355 aa14.24□□□□□ -0.13
GABRB3-202ENST00000311550 PLSCR4Q9NRQ2 329 aa14.24□□□□□ -0.13
GABRB3-202ENST00000311550 JOSD1Q15040 202 aaPredicted RBP14.23□□□□□ -0.13
GABRB3-202ENST00000311550 RNFT1Q5M7Z0 435 aa14.23□□□□□ -0.13
GABRB3-202ENST00000311550 FBXL7Q9UJT9 491 aa14.23□□□□□ -0.13
GABRB3-202ENST00000311550 DLX1P56177 255 aa14.23□□□□□ -0.13
GABRB3-202ENST00000311550 LINC01551Q86U37 167 aa14.23□□□□□ -0.13
GABRB3-202ENST00000311550 FMC1Q96HJ9 113 aa14.23□□□□□ -0.13
GABRB3-202ENST00000311550 C21orf62Q9NYP8 219 aa14.23□□□□□ -0.13
GABRB3-202ENST00000311550 RSPO1Q2MKA7 263 aaPredicted RBP14.23□□□□□ -0.13
GABRB3-202ENST00000311550 LY6G6EA0A0G2JKS1 128 aa14.23□□□□□ -0.13
GABRB3-202ENST00000311550 Q6ZS49 121 aa14.23□□□□□ -0.13
GABRB3-202ENST00000311550 TMEM133Q9H2Q1 129 aa14.23□□□□□ -0.13
GABRB3-202ENST00000311550 ANAPC10Q9UM13 185 aa14.23□□□□□ -0.13
GABRB3-202ENST00000311550 U3KQA8 63 aa14.23□□□□□ -0.13
GABRB3-202ENST00000311550 IGKV3-15P01624 115 aa14.22□□□□□ -0.13
GABRB3-202ENST00000311550 GPR183P32249 361 aa14.22□□□□□ -0.13
GABRB3-202ENST00000311550 SAPCD1Q5SSQ6 148 aa14.22□□□□□ -0.13
GABRB3-202ENST00000311550 RPUSD1Q9UJJ7 312 aaKnown RBP14.22□□□□□ -0.13
GABRB3-202ENST00000311550 TCRBV4S1A1TA0A5B7 111 aa14.22□□□□□ -0.13
GABRB3-202ENST00000311550 ZNF585BQ52M93 769 aa14.22□□□□□ -0.13
GABRB3-202ENST00000311550 NDUFAF3Q9BU61 184 aa14.22□□□□□ -0.13
GABRB3-202ENST00000311550 A0A1W2PS18 150 aa14.22□□□□□ -0.13
GABRB3-202ENST00000311550 PARD6GQ9BYG4 376 aaPredicted RBP14.22□□□□□ -0.13
GABRB3-202ENST00000311550 TANC1Q9C0D5 1861 aa14.22□□□□□ -0.13
GABRB3-202ENST00000311550 A0A1W2PRE2 83 aa14.22□□□□□ -0.13
GABRB3-202ENST00000311550 FAM90A9PA6NNJ1 464 aa14.22□□□□□ -0.13
GABRB3-202ENST00000311550 DNLZQ5SXM8 178 aa14.22□□□□□ -0.13
GABRB3-202ENST00000311550 LYRM7Q5U5X0 104 aa14.22□□□□□ -0.13
GABRB3-202ENST00000311550 PRELID3AQ96N28 172 aa14.22□□□□□ -0.13
GABRB3-202ENST00000311550 TRBV20OR9-2A0A075B6H5 130 aa14.22□□□□□ -0.13
GABRB3-202ENST00000311550 NTF4P34130 210 aa14.22□□□□□ -0.13
GABRB3-202ENST00000311550 INTS1Q8N201 2190 aaKnown RBP14.22□□□□□ -0.13
GABRB3-202ENST00000311550 PPP1R27Q86WC6 154 aa14.21□□□□□ -0.13
GABRB3-202ENST00000311550 KIR3DL3Q8N743 410 aa14.21□□□□□ -0.13
GABRB3-202ENST00000311550 OR1N2Q8NGR9 330 aa14.21□□□□□ -0.13
GABRB3-202ENST00000311550 AGMATQ9BSE5 352 aa14.21□□□□□ -0.13
GABRB3-202ENST00000311550 OSTCQ9NRP0 149 aa14.21□□□□□ -0.13
GABRB3-202ENST00000311550 EPDR1Q9UM22 224 aa14.21□□□□□ -0.13
GABRB3-202ENST00000311550 PLXNB3Q9ULL4 1909 aa14.21□□□□□ -0.13
GABRB3-202ENST00000311550 CIDEAO60543 219 aa14.21□□□□□ -0.13
GABRB3-202ENST00000311550 TMEM50AO95807 157 aa14.21□□□□□ -0.13
GABRB3-202ENST00000311550 PYY3Q5JQD4 70 aa14.21□□□□□ -0.13
GABRB3-202ENST00000311550 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.21□□□□□ -0.13
GABRB3-202ENST00000311550 H3BVH4 76 aa14.21□□□□□ -0.13
GABRB3-202ENST00000311550 M0R3E3 92 aa14.21□□□□□ -0.13
GABRB3-202ENST00000311550 GPX1P07203 203 aa14.21□□□□□ -0.13
GABRB3-202ENST00000311550 PET117Q6UWS5 81 aa14.21□□□□□ -0.14
GABRB3-202ENST00000311550 DYNLRB2Q8TF09 96 aa14.21□□□□□ -0.14
GABRB3-202ENST00000311550 ARPC1AQ92747 370 aa14.21□□□□□ -0.14
GABRB3-202ENST00000311550 EEF1AKMT3Q96AZ1 226 aa14.21□□□□□ -0.14
GABRB3-202ENST00000311550 PMCHL2Q9BQD1 86 aa14.21□□□□□ -0.14
GABRB3-202ENST00000311550 COL6A6A6NMZ7 2263 aa14.21□□□□□ -0.14
GABRB3-202ENST00000311550 SPTAN1Q13813 2472 aaKnown RBP14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms