RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 TIMM9Q9Y5J7 89 aa12.87□□□□□ -0.35
LEMD3-201ENST00000308330 TAX1BP3O14907 124 aa12.87□□□□□ -0.35
LEMD3-201ENST00000308330 TNXAQ16473 311 aa12.87□□□□□ -0.35
LEMD3-201ENST00000308330 TMEM101Q96IK0 257 aa12.87□□□□□ -0.35
LEMD3-201ENST00000308330 NABP2Q9BQ15 211 aa12.87□□□□□ -0.35
LEMD3-201ENST00000308330 NPVFQ9HCQ7 196 aa12.87□□□□□ -0.35
LEMD3-201ENST00000308330 PSG8Q9UQ74 426 aa12.87□□□□□ -0.35
LEMD3-201ENST00000308330 FNDC10F2Z333 226 aa12.86□□□□□ -0.35
LEMD3-201ENST00000308330 CHCHD1Q96BP2 118 aaKnown RBP12.86□□□□□ -0.35
LEMD3-201ENST00000308330 DEFB108AA8MXU0 73 aa12.86□□□□□ -0.35
LEMD3-201ENST00000308330 IGHV3-13P01766 116 aa12.86□□□□□ -0.35
LEMD3-201ENST00000308330 IGHV3-7P01780 117 aa12.86□□□□□ -0.35
LEMD3-201ENST00000308330 TSKUQ8WUA8 353 aa12.86□□□□□ -0.35
LEMD3-201ENST00000308330 IGKV3D-11A0A0A0MRZ8 115 aa12.86□□□□□ -0.35
LEMD3-201ENST00000308330 IFI6P09912 130 aa12.86□□□□□ -0.35
LEMD3-201ENST00000308330 ATP5G3P48201 142 aa12.86□□□□□ -0.35
LEMD3-201ENST00000308330 RPL8P62917 257 aaKnown RBP12.86□□□□□ -0.35
LEMD3-201ENST00000308330 HGFACQ04756 655 aa12.86□□□□□ -0.35
LEMD3-201ENST00000308330 ZNHIT1O43257 154 aa12.86□□□□□ -0.35
LEMD3-201ENST00000308330 ZNF646O15015 1829 aaPredicted RBP12.86□□□□□ -0.35
LEMD3-201ENST00000308330 RALGAPA1Q6GYQ0 2036 aa12.86□□□□□ -0.35
LEMD3-201ENST00000308330 LY6DQ14210 128 aa12.85□□□□□ -0.35
LEMD3-201ENST00000308330 NDFIP1Q9BT67 221 aa12.85□□□□□ -0.35
LEMD3-201ENST00000308330 TMEM160Q9NX00 188 aa12.85□□□□□ -0.35
LEMD3-201ENST00000308330 RNF7Q9UBF6 113 aa12.85□□□□□ -0.35
LEMD3-201ENST00000308330 V9GYY9 64 aa12.85□□□□□ -0.35
LEMD3-201ENST00000308330 ZP4Q12836 540 aa12.85□□□□□ -0.35
LEMD3-201ENST00000308330 PDPNQ86YL7 162 aa12.85□□□□□ -0.35
LEMD3-201ENST00000308330 GPR82Q96P67 336 aa12.85□□□□□ -0.35
LEMD3-201ENST00000308330 IL36GQ9NZH8 169 aa12.85□□□□□ -0.35
LEMD3-201ENST00000308330 DENND4AQ7Z401 1863 aa12.85□□□□□ -0.35
LEMD3-201ENST00000308330 M0QXV9 152 aa12.85□□□□□ -0.35
LEMD3-201ENST00000308330 TRACP01848 142 aa12.85□□□□□ -0.35
LEMD3-201ENST00000308330 C5orf24Q7Z6I8 188 aa12.85□□□□□ -0.35
LEMD3-201ENST00000308330 MPDZO75970 2070 aa12.85□□□□□ -0.35
LEMD3-201ENST00000308330 TGFBR3LH3BV60 316 aa12.85□□□□□ -0.35
LEMD3-201ENST00000308330 F2RL2O00254 374 aa12.85□□□□□ -0.35
LEMD3-201ENST00000308330 MPDU1O75352 247 aa12.85□□□□□ -0.35
LEMD3-201ENST00000308330 DOCK7Q96N67 2140 aa12.85□□□□□ -0.35
LEMD3-201ENST00000308330 PSG4Q00888 419 aa12.84□□□□□ -0.35
LEMD3-201ENST00000308330 RALGAPA2Q2PPJ7 1873 aa12.84□□□□□ -0.35
LEMD3-201ENST00000308330 ATP5J2P56134 94 aa12.84□□□□□ -0.35
LEMD3-201ENST00000308330 ADIPOQQ15848 244 aa12.84□□□□□ -0.35
LEMD3-201ENST00000308330 SCO2A0A1W2PP80 73 aa12.84□□□□□ -0.35
LEMD3-201ENST00000308330 TIMP3P35625 211 aa12.84□□□□□ -0.35
LEMD3-201ENST00000308330 ZPLD1Q8TCW7 415 aa12.84□□□□□ -0.35
LEMD3-201ENST00000308330 WFDC6Q9BQY6 131 aa12.84□□□□□ -0.35
LEMD3-201ENST00000308330 IL36RNQ9UBH0 155 aa12.84□□□□□ -0.35
LEMD3-201ENST00000308330 CHCHD2Q9Y6H1 151 aaPredicted RBP12.84□□□□□ -0.35
LEMD3-201ENST00000308330 LYL1P12980 280 aa12.84□□□□□ -0.35
LEMD3-201ENST00000308330 PTH2Q96A98 100 aa12.84□□□□□ -0.35
LEMD3-201ENST00000308330 LGALS7P47929 136 aa12.83□□□□□ -0.36
LEMD3-201ENST00000308330 CRYBA2P53672 197 aa12.83□□□□□ -0.36
LEMD3-201ENST00000308330 PRELID3AQ96N28 172 aa12.83□□□□□ -0.36
LEMD3-201ENST00000308330 ERG28Q9UKR5 140 aa12.83□□□□□ -0.36
LEMD3-201ENST00000308330 IGLV3-12A0A075B6K2 115 aa12.83□□□□□ -0.36
LEMD3-201ENST00000308330 MORN3Q6PF18 240 aaPredicted RBP12.83□□□□□ -0.36
LEMD3-201ENST00000308330 SPANXDQ9BXN6 97 aa12.83□□□□□ -0.36
LEMD3-201ENST00000308330 IGHV3-43A0A0B4J1X8 118 aa12.83□□□□□ -0.36
LEMD3-201ENST00000308330 IGHV3-43DP0DP04 118 aa12.83□□□□□ -0.36
LEMD3-201ENST00000308330 PSG2P11465 335 aa12.83□□□□□ -0.36
LEMD3-201ENST00000308330 TMEM230Q96A57 120 aa12.83□□□□□ -0.36
LEMD3-201ENST00000308330 TNFRSF19Q9NS68 423 aa12.83□□□□□ -0.36
LEMD3-201ENST00000308330 NAPSAO96009 420 aa12.82□□□□□ -0.36
LEMD3-201ENST00000308330 CKS2P33552 79 aa12.82□□□□□ -0.36
LEMD3-201ENST00000308330 ERHP84090 104 aaKnown RBP12.82□□□□□ -0.36
LEMD3-201ENST00000308330 OCC1Q8TAD7 63 aa12.82□□□□□ -0.36
LEMD3-201ENST00000308330 AICDAQ9GZX7 198 aa12.82□□□□□ -0.36
LEMD3-201ENST00000308330 PATJQ8NI35 1801 aa12.82□□□□□ -0.36
LEMD3-201ENST00000308330 PRSS29PA6NIE9 313 aa12.82□□□□□ -0.36
LEMD3-201ENST00000308330 NDUFB8O95169 186 aa12.82□□□□□ -0.36
LEMD3-201ENST00000308330 CD40P25942 277 aa12.82□□□□□ -0.36
LEMD3-201ENST00000308330 FAM110AQ9BQ89 295 aa12.82□□□□□ -0.36
LEMD3-201ENST00000308330 SFXN3Q9BWM7 321 aa12.82□□□□□ -0.36
LEMD3-201ENST00000308330 DOCK9Q9BZ29 2069 aa12.82□□□□□ -0.36
LEMD3-201ENST00000308330 IFNL4K9M1U5 179 aa12.82□□□□□ -0.36
LEMD3-201ENST00000308330 OR2H2O95918 312 aa12.82□□□□□ -0.36
LEMD3-201ENST00000308330 RHOGP84095 191 aa12.82□□□□□ -0.36
LEMD3-201ENST00000308330 SPSB3Q6PJ21 355 aa12.82□□□□□ -0.36
LEMD3-201ENST00000308330 MGAMO43451 1857 aa12.82□□□□□ -0.36
LEMD3-201ENST00000308330 H3BMG7 143 aa12.82□□□□□ -0.36
LEMD3-201ENST00000308330 ZNF688P0C7X2 276 aa12.82□□□□□ -0.36
LEMD3-201ENST00000308330 CACNG7P62955 275 aa12.82□□□□□ -0.36
LEMD3-201ENST00000308330 VWA8A3KMH1 1905 aa12.81□□□□□ -0.36
LEMD3-201ENST00000308330 SMAD7O15105 426 aaKnown RBP12.81□□□□□ -0.36
LEMD3-201ENST00000308330 SH2D6Q7Z4S9 175 aa12.81□□□□□ -0.36
LEMD3-201ENST00000308330 J3QT63 122 aa12.81□□□□□ -0.36
LEMD3-201ENST00000308330 LINC01560Q8TB33 94 aa12.81□□□□□ -0.36
LEMD3-201ENST00000308330 ZNF56Q15929 161 aa12.81□□□□□ -0.36
LEMD3-201ENST00000308330 TEPPQ6URK8 271 aa12.81□□□□□ -0.36
LEMD3-201ENST00000308330 LYPD6BQ8NI32 183 aa12.81□□□□□ -0.36
LEMD3-201ENST00000308330 C18orf15Q96N68 181 aa12.81□□□□□ -0.36
LEMD3-201ENST00000308330 DUX5Q96PT3 197 aa12.81□□□□□ -0.36
LEMD3-201ENST00000308330 SRXN1Q9BYN0 137 aa12.81□□□□□ -0.36
LEMD3-201ENST00000308330 PTPN13Q12923 2485 aa12.81□□□□□ -0.36
LEMD3-201ENST00000308330 hCG_38984A0A1B0GV85 526 aa12.81□□□□□ -0.36
LEMD3-201ENST00000308330 RNF115Q9Y4L5 304 aa12.81□□□□□ -0.36
LEMD3-201ENST00000308330 C17orf82Q86X59 251 aaPredicted RBP12.8□□□□□ -0.36
LEMD3-201ENST00000308330 FLYWCH2Q96CP2 140 aaKnown RBP12.8□□□□□ -0.36
LEMD3-201ENST00000308330 PDCD11Q14690 1871 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms