RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 COL5A1-AS1Q5SY13 56 aa4.37□□□□□ -1.71
VPS50-202ENST00000305866 ZNF474Q6S9Z5 364 aaPredicted RBP4.37□□□□□ -1.71
VPS50-202ENST00000305866 UNQ5815/PRO19632Q6UWF5 114 aa4.37□□□□□ -1.71
VPS50-202ENST00000305866 NHLRC2Q8NBF2 726 aa4.37□□□□□ -1.71
VPS50-202ENST00000305866 NUP35Q8NFH5 326 aa4.37□□□□□ -1.71
VPS50-202ENST00000305866 FDCSPQ8NFU4 85 aa4.37□□□□□ -1.71
VPS50-202ENST00000305866 OR5B3Q8NH48 314 aa4.37□□□□□ -1.71
VPS50-202ENST00000305866 IL1F10Q8WWZ1 152 aa4.37□□□□□ -1.71
VPS50-202ENST00000305866 LINC00479Q96M42 142 aa4.37□□□□□ -1.71
VPS50-202ENST00000305866 MRPL32Q9BYC8 188 aaKnown RBP4.37□□□□□ -1.71
VPS50-202ENST00000305866 GAL3ST2Q9H3Q3 398 aa4.37□□□□□ -1.71
VPS50-202ENST00000305866 RPUSD1Q9UJJ7 312 aaKnown RBP4.37□□□□□ -1.71
VPS50-202ENST00000305866 PRNDQ9UKY0 176 aa4.37□□□□□ -1.71
VPS50-202ENST00000305866 TCF19Q9Y242 345 aa4.37□□□□□ -1.71
VPS50-202ENST00000305866 TNCP24821 2201 aa4.37□□□□□ -1.71
VPS50-202ENST00000305866 PRRC2CQ9Y520 2896 aaKnown RBP4.37□□□□□ -1.71
VPS50-202ENST00000305866 AKAP13Q12802 2813 aa4.37□□□□□ -1.71
VPS50-202ENST00000305866 J3QR06 171 aa4.37□□□□□ -1.71
VPS50-202ENST00000305866 MRPS12O15235 138 aaKnown RBP4.37□□□□□ -1.71
VPS50-202ENST00000305866 AMY1AP04745 511 aa4.37□□□□□ -1.71
VPS50-202ENST00000305866 GATA2P23769 480 aaPredicted RBP4.37□□□□□ -1.71
VPS50-202ENST00000305866 KLF3P57682 345 aaPredicted RBP4.37□□□□□ -1.71
VPS50-202ENST00000305866 LINC00696Q6ZRV3 163 aa4.37□□□□□ -1.71
VPS50-202ENST00000305866 DOLPP1Q86YN1 238 aa4.37□□□□□ -1.71
VPS50-202ENST00000305866 SRSF8Q9BRL6 282 aaKnown RBP4.37□□□□□ -1.71
VPS50-202ENST00000305866 WNT10AQ9GZT5 417 aa4.37□□□□□ -1.71
VPS50-202ENST00000305866 FNDC4Q9H6D8 234 aaPredicted RBP4.37□□□□□ -1.71
VPS50-202ENST00000305866 CALYQ9NYX4 217 aa4.37□□□□□ -1.71
VPS50-202ENST00000305866 LINC00312Q9Y6C7 94 aa4.37□□□□□ -1.71
VPS50-202ENST00000305866 NAV3Q8IVL0 2385 aa4.37□□□□□ -1.71
VPS50-202ENST00000305866 A0A1W2PRE2 83 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 CBY3A6NI87 242 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 SIAH2O43255 324 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 HOXC12P31275 282 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 CEACAM3P40198 252 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 RPEL1Q2QD12 228 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 C9orf135Q5VTT2 229 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 OR4A47Q6IF82 309 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 DEFB125Q8N687 156 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 C8orf46Q8TAG6 207 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 OSR1Q8TAX0 266 aaPredicted RBP4.36□□□□□ -1.71
VPS50-202ENST00000305866 DEFB127Q9H1M4 99 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 TMEM140Q9NV12 185 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 GON4LQ3T8J9 2241 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 IGHV1-24A0A0C4DH33 117 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 SNURFLB1AK76 121 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 DIRC3C9JPN6 131 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 CA1P00915 261 aaPredicted RBP4.36□□□□□ -1.71
VPS50-202ENST00000305866 MT-ND6P03923 174 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 CT45A6P0DMU7 189 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 CT45A5P0DMU8 189 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 CT45A7P0DMV0 189 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 LRRC10Q5BKY1 277 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 BVES-AS1Q5T3Y7 98 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 COX8CQ7Z4L0 72 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 FAM19A2Q8N3H0 131 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 C11orf42Q8N5U0 333 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 TPRX1Q8N7U7 411 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 TMEM167AQ8TBQ9 72 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 MRGPRDQ8TDS7 321 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 TNFRSF14Q92956 283 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 NPFFR1Q9GZQ6 430 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 C12orf49Q9H741 205 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 GCM1Q9NP62 436 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 UQCR10Q9UDW1 63 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 U3KQK5 164 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 ASH1LQ9NR48 2969 aaKnown RBP4.36□□□□□ -1.71
VPS50-202ENST00000305866 LTAP01374 205 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 SAA2P0DJI9 122 aaPredicted RBP4.36□□□□□ -1.71
VPS50-202ENST00000305866 C1orf185Q5T7R7 199 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 C22orf34Q6ZV56 151 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 ZNF808Q8N4W9 903 aaPredicted RBP4.36□□□□□ -1.71
VPS50-202ENST00000305866 ARL6IP6Q8N6S5 226 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 NEK7Q8TDX7 302 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 LRRC29Q8WV35 223 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 COMMD5Q9GZQ3 224 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 PROCRQ9UNN8 238 aa4.36□□□□□ -1.71
VPS50-202ENST00000305866 TRAV9-2A0A087WT02 112 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 TEX50A0A1B0GTY4 177 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 DPRXA6NFQ7 191 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 IGHV1-46P01743 117 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 IGKV1-16P04430 117 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 GP9P14770 177 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 CRYBB3P26998 211 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 KIAA1644Q3SXP7 199 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 CST9LP1Q5W188 147 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 PQLC2Q6ZP29 291 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 C19orf35Q6ZS72 473 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 SNRNP40Q96DI7 357 aaKnown RBP4.35□□□□□ -1.71
VPS50-202ENST00000305866 TRIB1Q96RU8 372 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 JMJD8Q96S16 334 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 VAMP8Q9BV40 100 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 DNAJC13O75165 2243 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 IGHV3-43A0A0B4J1X8 118 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 TRAV5A0A0B4J249 113 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 C20orf202A1L168 122 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 A8MXE2 369 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 LYZL6O75951 148 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 IGHV3-43DP0DP04 118 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 GPR12P47775 334 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms