RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 SIT1Q9Y3P8 196 aa11.99□□□□□ -0.49
COL6A2-201ENST00000300527 IGHV3-21A0A0B4J1V1 117 aa11.99□□□□□ -0.49
COL6A2-201ENST00000300527 LEPROTL1O95214 131 aa11.99□□□□□ -0.49
COL6A2-201ENST00000300527 REG1BP48304 166 aa11.99□□□□□ -0.49
COL6A2-201ENST00000300527 SSBP2P81877 361 aaPredicted RBP11.99□□□□□ -0.49
COL6A2-201ENST00000300527 ATP1A1-AS1Q5TC04 95 aa11.99□□□□□ -0.49
COL6A2-201ENST00000300527 MUC15Q8N387 334 aa11.99□□□□□ -0.49
COL6A2-201ENST00000300527 OR2V2Q96R30 315 aa11.99□□□□□ -0.49
COL6A2-201ENST00000300527 IDI2-AS1Q9NZ38 188 aa11.99□□□□□ -0.49
COL6A2-201ENST00000300527 SLC25A5P05141 298 aaKnown RBP11.99□□□□□ -0.49
COL6A2-201ENST00000300527 SLC25A34Q6PIV7 304 aa11.99□□□□□ -0.49
COL6A2-201ENST00000300527 TPPP3Q9BW30 176 aa11.99□□□□□ -0.49
COL6A2-201ENST00000300527 CALYQ9NYX4 217 aa11.99□□□□□ -0.49
COL6A2-201ENST00000300527 SPRY3O43610 288 aa11.98□□□□□ -0.49
COL6A2-201ENST00000300527 MMP23AO75900 390 aa11.98□□□□□ -0.49
COL6A2-201ENST00000300527 ORM2P19652 201 aa11.98□□□□□ -0.49
COL6A2-201ENST00000300527 DUX4L9Q6RFH8 374 aaPredicted RBP11.98□□□□□ -0.49
COL6A2-201ENST00000300527 PLXNB1O43157 2135 aa11.98□□□□□ -0.49
COL6A2-201ENST00000300527 CACNA1GO43497 2377 aa11.98□□□□□ -0.49
COL6A2-201ENST00000300527 IGKV1-16P04430 117 aa11.98□□□□□ -0.49
COL6A2-201ENST00000300527 OCIAD2Q56VL3 154 aa11.98□□□□□ -0.49
COL6A2-201ENST00000300527 MOGAT3Q86VF5 341 aa11.98□□□□□ -0.49
COL6A2-201ENST00000300527 PAXXQ9BUH6 204 aa11.98□□□□□ -0.49
COL6A2-201ENST00000300527 HES4Q9HCC6 221 aa11.98□□□□□ -0.49
COL6A2-201ENST00000300527 ASPMQ8IZT6 3477 aa11.98□□□□□ -0.49
COL6A2-201ENST00000300527 TRAV30A0A087WSZ9 112 aa11.98□□□□□ -0.49
COL6A2-201ENST00000300527 C2orf70A6NJV1 201 aa11.98□□□□□ -0.49
COL6A2-201ENST00000300527 K7EP13 123 aa11.98□□□□□ -0.49
COL6A2-201ENST00000300527 TMPRSS3P57727 454 aa11.98□□□□□ -0.49
COL6A2-201ENST00000300527 SMIM15Q7Z3B0 74 aa11.98□□□□□ -0.49
COL6A2-201ENST00000300527 ASCL2Q99929 193 aa11.98□□□□□ -0.49
COL6A2-201ENST00000300527 CT45A1Q5HYN5 189 aa11.97□□□□□ -0.49
COL6A2-201ENST00000300527 RBMXL3Q8N7X1 1067 aaKnown RBP11.97□□□□□ -0.49
COL6A2-201ENST00000300527 CT45A3Q8NHU0 189 aa11.97□□□□□ -0.49
COL6A2-201ENST00000300527 IGKV1D-17A0A075B6S4 117 aa11.97□□□□□ -0.49
COL6A2-201ENST00000300527 TRGV5A0A0B4J1U4 118 aa11.97□□□□□ -0.49
COL6A2-201ENST00000300527 H0YJW9 148 aa11.97□□□□□ -0.49
COL6A2-201ENST00000300527 TAX1BP3O14907 124 aa11.97□□□□□ -0.49
COL6A2-201ENST00000300527 IGF2BP2-AS1Q96M15 143 aa11.97□□□□□ -0.49
COL6A2-201ENST00000300527 SLC25A33Q9BSK2 321 aa11.97□□□□□ -0.49
COL6A2-201ENST00000300527 MRPL27Q9P0M9 148 aaKnown RBP11.97□□□□□ -0.49
COL6A2-201ENST00000300527 SLC25A10Q9UBX3 287 aaPredicted RBP11.97□□□□□ -0.49
COL6A2-201ENST00000300527 PCNX2A6NKB5 2137 aa11.97□□□□□ -0.49
COL6A2-201ENST00000300527 PPIAL4DF5H284 164 aa11.96□□□□□ -0.49
COL6A2-201ENST00000300527 PEX7O00628 323 aa11.96□□□□□ -0.49
COL6A2-201ENST00000300527 TNFSF15O95150 251 aa11.96□□□□□ -0.49
COL6A2-201ENST00000300527 REG1AP05451 166 aa11.96□□□□□ -0.49
COL6A2-201ENST00000300527 SPRNQ5BIV9 151 aa11.96□□□□□ -0.49
COL6A2-201ENST00000300527 PNKDQ8N490 385 aa11.96□□□□□ -0.49
COL6A2-201ENST00000300527 SPRR3Q9UBC9 169 aa11.96□□□□□ -0.49
COL6A2-201ENST00000300527 JPT1Q9UK76 154 aa11.96□□□□□ -0.49
COL6A2-201ENST00000300527 DYSFO75923 2080 aa11.96□□□□□ -0.49
COL6A2-201ENST00000300527 CHEK1O14757 476 aa11.96□□□□□ -0.49
COL6A2-201ENST00000300527 PPP1R35Q8TAP8 253 aa11.96□□□□□ -0.49
COL6A2-201ENST00000300527 PILRBQ9UKJ0 227 aa11.96□□□□□ -0.49
COL6A2-201ENST00000300527 NAV3Q8IVL0 2385 aa11.96□□□□□ -0.5
COL6A2-201ENST00000300527 PSG9Q00887 426 aa11.96□□□□□ -0.5
COL6A2-201ENST00000300527 RNFT1Q5M7Z0 435 aa11.96□□□□□ -0.5
COL6A2-201ENST00000300527 C10orf55Q5SWW7 151 aa11.96□□□□□ -0.5
COL6A2-201ENST00000300527 NPIPB3Q92617 1050 aa11.96□□□□□ -0.5
COL6A2-201ENST00000300527 GRAMD2BQ96HH9 432 aa11.96□□□□□ -0.5
COL6A2-201ENST00000300527 ZNF835Q9Y2P0 537 aa11.96□□□□□ -0.5
COL6A2-201ENST00000300527 BVES-AS1Q5T3Y7 98 aa11.95□□□□□ -0.5
COL6A2-201ENST00000300527 TMEM116Q8NCL8 245 aa11.95□□□□□ -0.5
COL6A2-201ENST00000300527 PGPA6NDG6 321 aa11.95□□□□□ -0.5
COL6A2-201ENST00000300527 NTN3O00634 580 aaPredicted RBP11.95□□□□□ -0.5
COL6A2-201ENST00000300527 DAZAP1Q96EP5 407 aaKnown RBP11.95□□□□□ -0.5
COL6A2-201ENST00000300527 AP1S3Q96PC3 154 aa11.95□□□□□ -0.5
COL6A2-201ENST00000300527 TMEM191AQ9H0A3 160 aa11.95□□□□□ -0.5
COL6A2-201ENST00000300527 GSX1Q9H4S2 264 aaPredicted RBP11.95□□□□□ -0.5
COL6A2-201ENST00000300527 A0A1W2PRE2 83 aa11.95□□□□□ -0.5
COL6A2-201ENST00000300527 VWC2LB2RUY7 222 aa11.95□□□□□ -0.5
COL6A2-201ENST00000300527 SYS1-DBNDD2H3BUS1 97 aa11.95□□□□□ -0.5
COL6A2-201ENST00000300527 SAP30O75446 220 aa11.95□□□□□ -0.5
COL6A2-201ENST00000300527 MOSP00540 346 aa11.95□□□□□ -0.5
COL6A2-201ENST00000300527 LRRC10Q5BKY1 277 aa11.95□□□□□ -0.5
COL6A2-201ENST00000300527 C10orf113Q5VZT2 155 aa11.95□□□□□ -0.5
COL6A2-201ENST00000300527 COMMD5Q9GZQ3 224 aa11.95□□□□□ -0.5
COL6A2-201ENST00000300527 FNDC4Q9H6D8 234 aaPredicted RBP11.95□□□□□ -0.5
COL6A2-201ENST00000300527 TRGV8A0A0C4DH27 118 aa11.94□□□□□ -0.5
COL6A2-201ENST00000300527 SRRM4A7MD48 611 aaKnown RBP11.94□□□□□ -0.5
COL6A2-201ENST00000300527 MGST3O14880 152 aa11.94□□□□□ -0.5
COL6A2-201ENST00000300527 WISP2O76076 250 aa11.94□□□□□ -0.5
COL6A2-201ENST00000300527 CECR9P0C854 216 aa11.94□□□□□ -0.5
COL6A2-201ENST00000300527 HIST1H1EP10412 219 aaKnown RBP11.94□□□□□ -0.5
COL6A2-201ENST00000300527 OR1B1Q8NGR6 318 aa11.94□□□□□ -0.5
COL6A2-201ENST00000300527 MEGF9Q9H1U4 602 aa11.94□□□□□ -0.5
COL6A2-201ENST00000300527 ZFHX4Q86UP3 3567 aa11.94□□□□□ -0.5
COL6A2-201ENST00000300527 IGHV1-24A0A0C4DH33 117 aa11.94□□□□□ -0.5
COL6A2-201ENST00000300527 KLRC4-KLRK1H3BQV0 150 aa11.94□□□□□ -0.5
COL6A2-201ENST00000300527 TMEM177Q53S58 311 aa11.94□□□□□ -0.5
COL6A2-201ENST00000300527 FLYWCH2Q96CP2 140 aaKnown RBP11.94□□□□□ -0.5
COL6A2-201ENST00000300527 SLC25A2Q9BXI2 301 aa11.94□□□□□ -0.5
COL6A2-201ENST00000300527 TMEM14BQ9NUH8 114 aa11.94□□□□□ -0.5
COL6A2-201ENST00000300527 HILPDAQ9Y5L2 63 aa11.94□□□□□ -0.5
COL6A2-201ENST00000300527 TRAV8-6A0A0B4J262 113 aa11.94□□□□□ -0.5
COL6A2-201ENST00000300527 LOXL3P58215 753 aa11.94□□□□□ -0.5
COL6A2-201ENST00000300527 PMS2CLQ68D20 193 aa11.94□□□□□ -0.5
COL6A2-201ENST00000300527 VWA1Q6PCB0 445 aa11.94□□□□□ -0.5
COL6A2-201ENST00000300527 RAB37Q96AX2 223 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms