RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 HSPB9Q9BQS6 159 aa18.07■□□□□ 0.48
PTX3-201ENST00000295927 EIF5A2Q9GZV4 153 aaKnown RBP18.07■□□□□ 0.48
PTX3-201ENST00000295927 LINC00869P0C866 280 aa18.06■□□□□ 0.48
PTX3-201ENST00000295927 PBDC1Q9BVG4 233 aa18.06■□□□□ 0.48
PTX3-201ENST00000295927 C9JQL5 133 aa18.06■□□□□ 0.48
PTX3-201ENST00000295927 HMGB3O15347 200 aaKnown RBP18.06■□□□□ 0.48
PTX3-201ENST00000295927 MT-CO2P00403 227 aa18.06■□□□□ 0.48
PTX3-201ENST00000295927 EGR2P11161 476 aaPredicted RBP18.06■□□□□ 0.48
PTX3-201ENST00000295927 RND2P52198 227 aa18.06■□□□□ 0.48
PTX3-201ENST00000295927 C5orf56Q8N8D9 126 aa18.06■□□□□ 0.48
PTX3-201ENST00000295927 RAB24Q969Q5 203 aa18.06■□□□□ 0.48
PTX3-201ENST00000295927 PRRC2AP48634 2157 aaKnown RBP18.05■□□□□ 0.48
PTX3-201ENST00000295927 IGHV3-21A0A0B4J1V1 117 aa18.05■□□□□ 0.48
PTX3-201ENST00000295927 SEC14L6B5MCN3 397 aa18.05■□□□□ 0.48
PTX3-201ENST00000295927 CDC34P49427 236 aaPredicted RBP18.05■□□□□ 0.48
PTX3-201ENST00000295927 THAP8Q8NA92 274 aa18.05■□□□□ 0.48
PTX3-201ENST00000295927 WFDC11Q8NEX6 87 aa18.05■□□□□ 0.48
PTX3-201ENST00000295927 ZANQ9Y493 2812 aa18.04■□□□□ 0.48
PTX3-201ENST00000295927 NPIPB5A8MRT5 1133 aa18.04■□□□□ 0.48
PTX3-201ENST00000295927 PEA15Q15121 130 aa18.04■□□□□ 0.48
PTX3-201ENST00000295927 MOB4Q9Y3A3 225 aa18.04■□□□□ 0.48
PTX3-201ENST00000295927 CSMD1Q96PZ7 3565 aa18.04■□□□□ 0.48
PTX3-201ENST00000295927 RBFOX3A6NFN3 312 aa18.04■□□□□ 0.48
PTX3-201ENST00000295927 GATA2P23769 480 aaPredicted RBP18.04■□□□□ 0.48
PTX3-201ENST00000295927 TTC9CQ8N5M4 171 aa18.04■□□□□ 0.48
PTX3-201ENST00000295927 OR1L6Q8NGR2 347 aa18.04■□□□□ 0.48
PTX3-201ENST00000295927 RARRES2Q99969 163 aa18.04■□□□□ 0.48
PTX3-201ENST00000295927 IGKV1D-37A0A075B6S9 117 aa18.03■□□□□ 0.48
PTX3-201ENST00000295927 SH2D7A6NKC9 451 aaPredicted RBP18.03■□□□□ 0.48
PTX3-201ENST00000295927 H3BUX3 64 aa18.03■□□□□ 0.48
PTX3-201ENST00000295927 I3L2K1 104 aa18.03■□□□□ 0.48
PTX3-201ENST00000295927 BPIFB3P59826 476 aa18.03■□□□□ 0.48
PTX3-201ENST00000295927 HAGHQ16775 308 aa18.03■□□□□ 0.48
PTX3-201ENST00000295927 CYB5R2Q6BCY4 276 aa18.03■□□□□ 0.48
PTX3-201ENST00000295927 CYP2G1PQ6ZSU1 146 aa18.03■□□□□ 0.48
PTX3-201ENST00000295927 CSPG4Q6UVK1 2322 aa18.03■□□□□ 0.48
PTX3-201ENST00000295927 PDZD2O15018 2839 aa18.03■□□□□ 0.48
PTX3-201ENST00000295927 A0A1W2PPV4 95 aa18.02■□□□□ 0.48
PTX3-201ENST00000295927 TMEM116Q8NCL8 245 aa18.02■□□□□ 0.48
PTX3-201ENST00000295927 C22orf15Q8WYQ4 148 aa18.02■□□□□ 0.48
PTX3-201ENST00000295927 ZFP92A6NM28 416 aa18.02■□□□□ 0.47
PTX3-201ENST00000295927 ADCYAP1P18509 176 aa18.02■□□□□ 0.47
PTX3-201ENST00000295927 LY6EQ16553 131 aa18.02■□□□□ 0.47
PTX3-201ENST00000295927 GNG13Q9P2W3 67 aa18.02■□□□□ 0.47
PTX3-201ENST00000295927 ZFHX3Q15911 3703 aa18.01■□□□□ 0.47
PTX3-201ENST00000295927 MDFIC2A0A1B0GVS7 189 aa18.01■□□□□ 0.47
PTX3-201ENST00000295927 TCRBV4S1A1TA0A5B7 111 aa18.01■□□□□ 0.47
PTX3-201ENST00000295927 A6NDX4 124 aa18.01■□□□□ 0.47
PTX3-201ENST00000295927 BCL6BQ8N143 479 aaPredicted RBP18.01■□□□□ 0.47
PTX3-201ENST00000295927 SGMS2Q8NHU3 365 aa18.01■□□□□ 0.47
PTX3-201ENST00000295927 K7EIM0 57 aa18■□□□□ 0.47
PTX3-201ENST00000295927 TSPAN9O75954 239 aa18■□□□□ 0.47
PTX3-201ENST00000295927 FSHBP01225 129 aa18■□□□□ 0.47
PTX3-201ENST00000295927 AMY1AP04745 511 aa18■□□□□ 0.47
PTX3-201ENST00000295927 SFTA3P0C7M3 94 aa18■□□□□ 0.47
PTX3-201ENST00000295927 ZNF90Q03938 601 aa18■□□□□ 0.47
PTX3-201ENST00000295927 OR5T1Q8NG75 326 aa18■□□□□ 0.47
PTX3-201ENST00000295927 FANCD2OSQ96PS1 177 aa18■□□□□ 0.47
PTX3-201ENST00000295927 TMPRSS5Q9H3S3 457 aa18■□□□□ 0.47
PTX3-201ENST00000295927 CREBBPQ92793 2442 aa18■□□□□ 0.47
PTX3-201ENST00000295927 F8W036 122 aa18■□□□□ 0.47
PTX3-201ENST00000295927 ATP6V0E1O15342 81 aa18■□□□□ 0.47
PTX3-201ENST00000295927 APOC3P02656 99 aa18■□□□□ 0.47
PTX3-201ENST00000295927 PPT1P50897 306 aa18■□□□□ 0.47
PTX3-201ENST00000295927 CIARTQ8N365 385 aaPredicted RBP18■□□□□ 0.47
PTX3-201ENST00000295927 NANPQ8TBE9 248 aa18■□□□□ 0.47
PTX3-201ENST00000295927 IGLV11-55A0A075B6I3 123 aa17.99■□□□□ 0.47
PTX3-201ENST00000295927 LINC01548A6NM66 108 aa17.99■□□□□ 0.47
PTX3-201ENST00000295927 DEFB112Q30KQ8 113 aa17.99■□□□□ 0.47
PTX3-201ENST00000295927 ZNF506Q5JVG8 444 aa17.99■□□□□ 0.47
PTX3-201ENST00000295927 SEPSECSQ9HD40 501 aaKnown RBP17.99■□□□□ 0.47
PTX3-201ENST00000295927 TNFRSF19Q9NS68 423 aa17.99■□□□□ 0.47
PTX3-201ENST00000295927 RHOBP62745 196 aa17.98■□□□□ 0.47
PTX3-201ENST00000295927 ICAM4Q14773 271 aa17.98■□□□□ 0.47
PTX3-201ENST00000295927 C10orf91Q5T1B1 145 aa17.98■□□□□ 0.47
PTX3-201ENST00000295927 SMDT1Q9H4I9 107 aa17.98■□□□□ 0.47
PTX3-201ENST00000295927 UNC79Q9P2D8 2635 aa17.98■□□□□ 0.47
PTX3-201ENST00000295927 LOC102723971A0A1B0GUV8 181 aa17.98■□□□□ 0.47
PTX3-201ENST00000295927 SELENOTP62341 195 aa17.98■□□□□ 0.47
PTX3-201ENST00000295927 SPATA31B1PQ5VZV4 182 aa17.98■□□□□ 0.47
PTX3-201ENST00000295927 CCDC28AQ8IWP9 274 aa17.98■□□□□ 0.47
PTX3-201ENST00000295927 TRGV9Q99603 122 aa17.98■□□□□ 0.47
PTX3-201ENST00000295927 TMUB1Q9BVT8 246 aa17.98■□□□□ 0.47
PTX3-201ENST00000295927 SEC11CQ9BY50 192 aa17.98■□□□□ 0.47
PTX3-201ENST00000295927 ITPR3Q14573 2671 aa17.98■□□□□ 0.47
PTX3-201ENST00000295927 BCL2P10415 239 aa17.97■□□□□ 0.47
PTX3-201ENST00000295927 PMS2P11Q13670 270 aa17.97■□□□□ 0.47
PTX3-201ENST00000295927 ECSCRQ19T08 205 aa17.97■□□□□ 0.47
PTX3-201ENST00000295927 UNQ5815/PRO19632Q6UWF5 114 aa17.97■□□□□ 0.47
PTX3-201ENST00000295927 OR4X1Q8NH49 305 aa17.97■□□□□ 0.47
PTX3-201ENST00000295927 RXFP4Q8TDU9 374 aa17.97■□□□□ 0.47
PTX3-201ENST00000295927 FOXC2Q99958 501 aa17.97■□□□□ 0.47
PTX3-201ENST00000295927 GSX1Q9H4S2 264 aaPredicted RBP17.97■□□□□ 0.47
PTX3-201ENST00000295927 PITPNC1Q9UKF7 332 aa17.97■□□□□ 0.47
PTX3-201ENST00000295927 STAG3L2P0CL84 134 aa17.96■□□□□ 0.47
PTX3-201ENST00000295927 STAG3L3P0CL85 134 aa17.96■□□□□ 0.47
PTX3-201ENST00000295927 KHDC3LQ587J8 217 aa17.96■□□□□ 0.47
PTX3-201ENST00000295927 IQCF2Q8IXL9 164 aa17.96■□□□□ 0.47
PTX3-201ENST00000295927 FAM110DQ8TAY7 271 aaPredicted RBP17.96■□□□□ 0.47
PTX3-201ENST00000295927 ITPR2Q14571 2701 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms