RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 PCOLCEQ15113 449 aa13.46□□□□□ -0.25
GPC1-201ENST00000264039 ZNF788Q6ZQV5 615 aa13.46□□□□□ -0.25
GPC1-201ENST00000264039 TEX45Q8NA69 505 aa13.46□□□□□ -0.25
GPC1-201ENST00000264039 METRNQ9UJH8 293 aa13.46□□□□□ -0.25
GPC1-201ENST00000264039 A0A1W2PQM1 296 aa13.46□□□□□ -0.25
GPC1-201ENST00000264039 ZNF784Q8NCA9 323 aaPredicted RBP13.46□□□□□ -0.25
GPC1-201ENST00000264039 DSCAML1Q8TD84 2053 aa13.46□□□□□ -0.26
GPC1-201ENST00000264039 LIPFP07098 398 aa13.46□□□□□ -0.26
GPC1-201ENST00000264039 PAX2Q02962 417 aa13.46□□□□□ -0.26
GPC1-201ENST00000264039 NEUROG1Q92886 237 aa13.46□□□□□ -0.26
GPC1-201ENST00000264039 JKAMPQ9P055 326 aa13.46□□□□□ -0.26
GPC1-201ENST00000264039 A0A0G2JLM5 398 aa13.45□□□□□ -0.26
GPC1-201ENST00000264039 CLDN18P56856 261 aa13.45□□□□□ -0.26
GPC1-201ENST00000264039 HSPE1P61604 102 aaKnown RBP13.45□□□□□ -0.26
GPC1-201ENST00000264039 HIST1H1AQ02539 215 aaPredicted RBP13.45□□□□□ -0.26
GPC1-201ENST00000264039 GUSBP1Q15486 140 aa13.45□□□□□ -0.26
GPC1-201ENST00000264039 C1orf53Q5VUE5 145 aa13.45□□□□□ -0.26
GPC1-201ENST00000264039 PCNX2A6NKB5 2137 aa13.45□□□□□ -0.26
GPC1-201ENST00000264039 FRYQ5TBA9 3013 aa13.45□□□□□ -0.26
GPC1-201ENST00000264039 C9JCJ5 164 aa13.45□□□□□ -0.26
GPC1-201ENST00000264039 TOMM40O96008 361 aa13.45□□□□□ -0.26
GPC1-201ENST00000264039 A1L4Q6 167 aa13.44□□□□□ -0.26
GPC1-201ENST00000264039 GGTLC3B5MD39 225 aa13.44□□□□□ -0.26
GPC1-201ENST00000264039 SPRY3O43610 288 aa13.44□□□□□ -0.26
GPC1-201ENST00000264039 Q6ZS49 121 aa13.44□□□□□ -0.26
GPC1-201ENST00000264039 TMUB1Q9BVT8 246 aa13.44□□□□□ -0.26
GPC1-201ENST00000264039 ZNF503-AS2A6NEH8 195 aa13.44□□□□□ -0.26
GPC1-201ENST00000264039 MOSP00540 346 aa13.44□□□□□ -0.26
GPC1-201ENST00000264039 FAM201AQ5SY85 155 aa13.44□□□□□ -0.26
GPC1-201ENST00000264039 NPIPB3Q92617 1050 aa13.44□□□□□ -0.26
GPC1-201ENST00000264039 RAB1CQ92928 201 aa13.44□□□□□ -0.26
GPC1-201ENST00000264039 GFRA3O60609 400 aa13.44□□□□□ -0.26
GPC1-201ENST00000264039 MRPS17Q9Y2R5 130 aaKnown RBP13.44□□□□□ -0.26
GPC1-201ENST00000264039 A0A1B0GV72 72 aa13.43□□□□□ -0.26
GPC1-201ENST00000264039 AHRRA9YTQ3 701 aa13.43□□□□□ -0.26
GPC1-201ENST00000264039 C5orf67F2Z3F1 127 aa13.43□□□□□ -0.26
GPC1-201ENST00000264039 HCP5Q6MZN7 132 aa13.43□□□□□ -0.26
GPC1-201ENST00000264039 SRSF12Q8WXF0 261 aaKnown RBP13.43□□□□□ -0.26
GPC1-201ENST00000264039 TANC2Q9HCD6 1990 aa13.43□□□□□ -0.26
GPC1-201ENST00000264039 PEX7O00628 323 aa13.43□□□□□ -0.26
GPC1-201ENST00000264039 CD5LO43866 347 aa13.43□□□□□ -0.26
GPC1-201ENST00000264039 IGLV2-14P01704 120 aa13.43□□□□□ -0.26
GPC1-201ENST00000264039 ESDP10768 282 aa13.43□□□□□ -0.26
GPC1-201ENST00000264039 MEF2CQ06413 473 aaPredicted RBP13.43□□□□□ -0.26
GPC1-201ENST00000264039 CT55Q8WUE5 264 aa13.43□□□□□ -0.26
GPC1-201ENST00000264039 PKIBQ9C010 78 aa13.43□□□□□ -0.26
GPC1-201ENST00000264039 Q6P435 159 aa13.43□□□□□ -0.26
GPC1-201ENST00000264039 C5orf17Q8NAS9 161 aa13.43□□□□□ -0.26
GPC1-201ENST00000264039 CRISPLD2Q9H0B8 497 aa13.43□□□□□ -0.26
GPC1-201ENST00000264039 C2orf16Q68DN1 1984 aa13.43□□□□□ -0.26
GPC1-201ENST00000264039 ADH4P08319 380 aa13.42□□□□□ -0.26
GPC1-201ENST00000264039 AREGP15514 252 aa13.42□□□□□ -0.26
GPC1-201ENST00000264039 KIR3DS1Q14943 382 aa13.42□□□□□ -0.26
GPC1-201ENST00000264039 OR10W1Q8NGF6 305 aa13.42□□□□□ -0.26
GPC1-201ENST00000264039 H1FXQ92522 213 aaKnown RBP13.42□□□□□ -0.26
GPC1-201ENST00000264039 IGHV1-45A0A0A0MS14 117 aa13.42□□□□□ -0.26
GPC1-201ENST00000264039 PEAR1Q5VY43 1037 aaPredicted RBP13.42□□□□□ -0.26
GPC1-201ENST00000264039 GRAMD2BQ96HH9 432 aa13.42□□□□□ -0.26
GPC1-201ENST00000264039 IGLV3-32A0A0A0MS00 114 aa13.42□□□□□ -0.26
GPC1-201ENST00000264039 PPIAL4CA0A0B4J2A2 164 aa13.42□□□□□ -0.26
GPC1-201ENST00000264039 A0A1W2PR77 199 aa13.42□□□□□ -0.26
GPC1-201ENST00000264039 PPIAL4GP0DN37 164 aa13.42□□□□□ -0.26
GPC1-201ENST00000264039 PRDX2P32119 198 aa13.42□□□□□ -0.26
GPC1-201ENST00000264039 FOXL2NBQ6ZUU3 175 aa13.42□□□□□ -0.26
GPC1-201ENST00000264039 TRAV8-1A0A0A6YYK1 113 aa13.41□□□□□ -0.26
GPC1-201ENST00000264039 PLGLAQ15195 96 aa13.41□□□□□ -0.26
GPC1-201ENST00000264039 ZNF718Q3SXZ3 478 aa13.41□□□□□ -0.26
GPC1-201ENST00000264039 DEFB125Q8N687 156 aa13.41□□□□□ -0.26
GPC1-201ENST00000264039 DOPEY2Q9Y3R5 2298 aa13.41□□□□□ -0.26
GPC1-201ENST00000264039 PRSS47A8MTI9 375 aa13.41□□□□□ -0.26
GPC1-201ENST00000264039 M0R296 226 aa13.41□□□□□ -0.26
GPC1-201ENST00000264039 CT45A10P0DMU9 189 aa13.41□□□□□ -0.26
GPC1-201ENST00000264039 DUTP33316 252 aaKnown RBP13.41□□□□□ -0.26
GPC1-201ENST00000264039 CACNG7P62955 275 aa13.41□□□□□ -0.26
GPC1-201ENST00000264039 OR4A5Q8NH83 315 aa13.41□□□□□ -0.26
GPC1-201ENST00000264039 PMS2P5A8MQ11 134 aa13.41□□□□□ -0.26
GPC1-201ENST00000264039 K7EMI3 77 aa13.41□□□□□ -0.26
GPC1-201ENST00000264039 OR2J3O76001 311 aa13.41□□□□□ -0.26
GPC1-201ENST00000264039 LYZP61626 148 aa13.41□□□□□ -0.26
GPC1-201ENST00000264039 SIGMAR1Q99720 223 aa13.41□□□□□ -0.26
GPC1-201ENST00000264039 DUSP23Q9BVJ7 150 aa13.4□□□□□ -0.26
GPC1-201ENST00000264039 NHP2Q9NX24 153 aaKnown RBP13.4□□□□□ -0.26
GPC1-201ENST00000264039 MRPL27Q9P0M9 148 aaKnown RBP13.4□□□□□ -0.26
GPC1-201ENST00000264039 NAV3Q8IVL0 2385 aa13.4□□□□□ -0.26
GPC1-201ENST00000264039 PPIAL4EA0A075B759 164 aa13.4□□□□□ -0.26
GPC1-201ENST00000264039 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.4□□□□□ -0.26
GPC1-201ENST00000264039 PPBPP02775 128 aa13.4□□□□□ -0.26
GPC1-201ENST00000264039 CYC1P08574 325 aa13.4□□□□□ -0.26
GPC1-201ENST00000264039 CT45A6P0DMU7 189 aa13.4□□□□□ -0.26
GPC1-201ENST00000264039 CT45A5P0DMU8 189 aa13.4□□□□□ -0.26
GPC1-201ENST00000264039 CT45A7P0DMV0 189 aa13.4□□□□□ -0.26
GPC1-201ENST00000264039 PPIAL4FP0DN26 164 aa13.4□□□□□ -0.26
GPC1-201ENST00000264039 CT45A1Q5HYN5 189 aa13.4□□□□□ -0.26
GPC1-201ENST00000264039 SP5Q6BEB4 398 aaPredicted RBP13.4□□□□□ -0.26
GPC1-201ENST00000264039 Q8N976 141 aa13.4□□□□□ -0.26
GPC1-201ENST00000264039 CT45A3Q8NHU0 189 aa13.4□□□□□ -0.26
GPC1-201ENST00000264039 COX6A1P12074 109 aa13.4□□□□□ -0.26
GPC1-201ENST00000264039 FAM71F2Q6NXP2 309 aa13.4□□□□□ -0.26
GPC1-201ENST00000264039 GGNQ86UU5 652 aa13.4□□□□□ -0.26
GPC1-201ENST00000264039 IGHV1-24A0A0C4DH33 117 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms