RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 IGKV3-11P04433 115 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 PLAURQ03405 335 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 DTX1Q86Y01 620 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 OR52E5Q8NH55 327 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 HS3ST3B1Q9Y662 390 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 COL5A1P20908 1838 aaPredicted RBP4.05□□□□□ -1.76
RC3H1-201ENST00000258349 PTPN13Q12923 2485 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 IGKV3D-15A0A087WSY6 115 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 IGHV1-69-2A0A0G2JMI3 117 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 KBTBD11-OT1A0A1B0GTJ5 212 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 LINC01549A6NIU2 74 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 IGKV3-15P01624 115 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 CELA2AP08217 269 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 ZNF585BQ52M93 769 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 LEAP2Q969E1 77 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 NAV3Q8IVL0 2385 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 TRAV8-2A0A0B4J237 113 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 FOXH1O75593 365 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 IGFBP3P17936 291 aaPredicted RBP4.05□□□□□ -1.76
RC3H1-201ENST00000258349 ADMP35318 185 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 LAGE3Q14657 143 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 TGIF1Q15583 401 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 OR13C6PQ8NH95 151 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 CYSLTR1Q9Y271 337 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 TRBV7-9A0A0J9YWB2 115 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 C15orf61A6NNL5 157 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 NR2C2APQ86WQ0 139 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 GTF3AQ92664 365 aaKnown RBP4.05□□□□□ -1.76
RC3H1-201ENST00000258349 GPHA2Q96T91 129 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 PILRBQ9UKJ0 227 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 TRAV1-1A0A0B4J248 108 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 FOXD3Q9UJU5 478 aaPredicted RBP4.05□□□□□ -1.76
RC3H1-201ENST00000258349 LTBP2Q14767 1821 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 M0R381 172 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 HOXA3O43365 443 aaPredicted RBP4.05□□□□□ -1.76
RC3H1-201ENST00000258349 DUX3Q96PT4 197 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 MS4A6AQ9H2W1 248 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 IGHV4-39P01824 125 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 MALP21145 153 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 HSD52Q0P140 79 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 HEPN1Q6WQI6 88 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 WFDC6Q9BQY6 131 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 LINC00312Q9Y6C7 94 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 IGHV3OR16-12A0A075B7B8 117 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 HBDP02042 147 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 TRGV3P03979 118 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 IGFBP2P18065 325 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 CFAP161Q6P656 301 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 NPIPB3Q92617 1050 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 MGST2Q99735 147 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 OSTCQ9NRP0 149 aa4.05□□□□□ -1.76
RC3H1-201ENST00000258349 PSMB11A5LHX3 300 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 C1QCP02747 245 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 CCL20P78556 96 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 SAMD5Q5TGI4 173 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 TMEM42Q69YG0 159 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 SP7Q8TDD2 431 aaPredicted RBP4.04□□□□□ -1.76
RC3H1-201ENST00000258349 FGF11Q92914 225 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 COQ2Q96H96 371 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 SPANXA1Q9NS26 97 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 TMEM106BQ9NUM4 274 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 SMPXQ9UHP9 88 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 FOXA2Q9Y261 457 aaPredicted RBP4.04□□□□□ -1.76
RC3H1-201ENST00000258349 TRAV14DV4A0A0A6YYC5 116 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 C4orf51C9J302 202 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 PAX2Q02962 417 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 FAM19A2Q8N3H0 131 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 OR5AN1Q8NGI8 311 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 OR9G4Q8NGQ1 327 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 A0A0G2JK05 382 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 ZNF688P0C7X2 276 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 TMEM95Q3KNT9 176 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 PNKDQ8N490 385 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 FNDC4Q9H6D8 234 aaPredicted RBP4.04□□□□□ -1.76
RC3H1-201ENST00000258349 MRPS18CQ9Y3D5 142 aaKnown RBP4.04□□□□□ -1.76
RC3H1-201ENST00000258349 RAMP3O60896 148 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 SNRPCP09234 159 aaKnown RBP4.04□□□□□ -1.76
RC3H1-201ENST00000258349 IFI27P40305 119 aaPredicted RBP4.04□□□□□ -1.76
RC3H1-201ENST00000258349 ACTL10Q5JWF8 245 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 PVRIGQ6DKI7 326 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 PLPPR1Q8TBJ4 325 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 ORAOV1Q8WV07 137 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 ST6GALNAC6Q969X2 333 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 LINC00271P0C7V0 271 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 BTCP35070 178 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 PEAR1Q5VY43 1037 aaPredicted RBP4.04□□□□□ -1.76
RC3H1-201ENST00000258349 AGMATQ9BSE5 352 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 CFHR5Q9BXR6 569 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 C21orf62Q9NYP8 219 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 TCRBV4S1A1TA0A5B7 111 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 GLRXP35754 106 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 PCOLCEQ15113 449 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 ZNF525Q8N782 197 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 FBLN5Q9UBX5 448 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 CHCHD2Q9Y6H1 151 aaPredicted RBP4.04□□□□□ -1.76
RC3H1-201ENST00000258349 IQCF6A8MYZ5 107 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 IGKCP01834 107 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 CCL1P22362 96 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 ATP5J2P56134 94 aa4.04□□□□□ -1.76
RC3H1-201ENST00000258349 RPL23P62829 140 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms