RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 VAMP2P63027 116 aa10.87□□□□□ -0.67
VPS25-201ENST00000253794 TMEM116Q8NCL8 245 aa10.87□□□□□ -0.67
VPS25-201ENST00000253794 OR4X1Q8NH49 305 aa10.87□□□□□ -0.67
VPS25-201ENST00000253794 TRAV14DV4A0A0A6YYC5 116 aa10.86□□□□□ -0.67
VPS25-201ENST00000253794 FNDC10F2Z333 226 aa10.86□□□□□ -0.67
VPS25-201ENST00000253794 LINC01619G3V211 115 aa10.86□□□□□ -0.67
VPS25-201ENST00000253794 CCL24O00175 119 aa10.86□□□□□ -0.67
VPS25-201ENST00000253794 BMPR1BO00238 502 aa10.86□□□□□ -0.67
VPS25-201ENST00000253794 IFNA4P05014 189 aa10.86□□□□□ -0.67
VPS25-201ENST00000253794 P2RY1P47900 373 aa10.86□□□□□ -0.67
VPS25-201ENST00000253794 FGL1Q08830 312 aa10.86□□□□□ -0.67
VPS25-201ENST00000253794 ZNF616Q08AN1 781 aa10.86□□□□□ -0.67
VPS25-201ENST00000253794 SPSB3Q6PJ21 355 aa10.86□□□□□ -0.67
VPS25-201ENST00000253794 OR11H1Q8NG94 326 aa10.86□□□□□ -0.67
VPS25-201ENST00000253794 OR1N2Q8NGR9 330 aa10.86□□□□□ -0.67
VPS25-201ENST00000253794 PINX1Q96BK5 328 aaKnown RBP10.86□□□□□ -0.67
VPS25-201ENST00000253794 BSCL2Q96G97 398 aaPredicted RBP10.86□□□□□ -0.67
VPS25-201ENST00000253794 OR5B12Q96R08 314 aa10.86□□□□□ -0.67
VPS25-201ENST00000253794 OR5AC2Q9NZP5 309 aa10.86□□□□□ -0.67
VPS25-201ENST00000253794 IGHV4OR15-8A0A075B7B6 117 aa10.85□□□□□ -0.67
VPS25-201ENST00000253794 A0A087WW49 117 aa10.85□□□□□ -0.67
VPS25-201ENST00000253794 TGOLN2O43493 480 aa10.85□□□□□ -0.67
VPS25-201ENST00000253794 TRBV12-3P01733 135 aa10.85□□□□□ -0.67
VPS25-201ENST00000253794 NPBWR1P48145 328 aa10.85□□□□□ -0.67
VPS25-201ENST00000253794 DEFB136Q30KP8 78 aa10.85□□□□□ -0.67
VPS25-201ENST00000253794 LRRC37A5PQ49AS3 106 aa10.85□□□□□ -0.67
VPS25-201ENST00000253794 SLC16A13Q7RTY0 426 aa10.85□□□□□ -0.67
VPS25-201ENST00000253794 GGACTQ9BVM4 153 aa10.85□□□□□ -0.67
VPS25-201ENST00000253794 MRPL36Q9P0J6 103 aaKnown RBP10.85□□□□□ -0.67
VPS25-201ENST00000253794 CMYA5Q8N3K9 4069 aa10.85□□□□□ -0.67
VPS25-201ENST00000253794 IGHV3-21A0A0B4J1V1 117 aa10.84□□□□□ -0.67
VPS25-201ENST00000253794 G3V3Q6 166 aa10.84□□□□□ -0.67
VPS25-201ENST00000253794 GGCTO75223 188 aaKnown RBP10.84□□□□□ -0.67
VPS25-201ENST00000253794 CLN5O75503 358 aa10.84□□□□□ -0.67
VPS25-201ENST00000253794 TSPAN15O95858 294 aa10.84□□□□□ -0.67
VPS25-201ENST00000253794 CLEC3BP05452 202 aa10.84□□□□□ -0.67
VPS25-201ENST00000253794 CTSGP08311 255 aa10.84□□□□□ -0.67
VPS25-201ENST00000253794 METTL15P1P0C7V9 234 aa10.84□□□□□ -0.67
VPS25-201ENST00000253794 ZP3P21754 424 aa10.84□□□□□ -0.67
VPS25-201ENST00000253794 GPR183P32249 361 aa10.84□□□□□ -0.67
VPS25-201ENST00000253794 ADMP35318 185 aa10.84□□□□□ -0.67
VPS25-201ENST00000253794 SULT1A1P50225 295 aa10.84□□□□□ -0.67
VPS25-201ENST00000253794 CAV2P51636 162 aa10.84□□□□□ -0.67
VPS25-201ENST00000253794 DLK1P80370 383 aa10.84□□□□□ -0.67
VPS25-201ENST00000253794 MLANAQ16655 118 aa10.84□□□□□ -0.67
VPS25-201ENST00000253794 PRR31Q5SQ13 230 aa10.84□□□□□ -0.67
VPS25-201ENST00000253794 CLEC19AQ6UXS0 136 aa10.84□□□□□ -0.67
VPS25-201ENST00000253794 HAPLN4Q86UW8 402 aa10.84□□□□□ -0.67
VPS25-201ENST00000253794 TMEM252Q8N6L7 170 aa10.84□□□□□ -0.67
VPS25-201ENST00000253794 LINC00482Q8N8I6 264 aa10.84□□□□□ -0.67
VPS25-201ENST00000253794 MBD2Q9UBB5 411 aa10.84□□□□□ -0.67
VPS25-201ENST00000253794 S4R3C0 116 aa10.84□□□□□ -0.67
VPS25-201ENST00000253794 IGSF23A1L1A6 192 aa10.83□□□□□ -0.68
VPS25-201ENST00000253794 ANKRD34BA5PLL1 514 aa10.83□□□□□ -0.68
VPS25-201ENST00000253794 FAM24AA6NFZ4 105 aa10.83□□□□□ -0.68
VPS25-201ENST00000253794 IGHV3-23P01764 117 aa10.83□□□□□ -0.68
VPS25-201ENST00000253794 HOXD3P31249 432 aaPredicted RBP10.83□□□□□ -0.68
VPS25-201ENST00000253794 ARL3P36405 182 aa10.83□□□□□ -0.68
VPS25-201ENST00000253794 BAXQ07812 192 aa10.83□□□□□ -0.68
VPS25-201ENST00000253794 ARL16Q0P5N6 197 aa10.83□□□□□ -0.68
VPS25-201ENST00000253794 GAMTQ14353 236 aa10.83□□□□□ -0.68
VPS25-201ENST00000253794 ACSM6Q6P461 480 aa10.83□□□□□ -0.68
VPS25-201ENST00000253794 GPHB5Q86YW7 130 aa10.83□□□□□ -0.68
VPS25-201ENST00000253794 WFDC9Q8NEX5 89 aa10.83□□□□□ -0.68
VPS25-201ENST00000253794 OR10P1Q8NGE3 313 aa10.83□□□□□ -0.68
VPS25-201ENST00000253794 OR2T35Q8NGX2 323 aa10.83□□□□□ -0.68
VPS25-201ENST00000253794 DPF1Q92782 380 aa10.83□□□□□ -0.68
VPS25-201ENST00000253794 ZNF414Q96IQ9 312 aa10.83□□□□□ -0.68
VPS25-201ENST00000253794 SLC35E1Q96K37 410 aa10.83□□□□□ -0.68
VPS25-201ENST00000253794 SLC25A31Q9H0C2 315 aa10.83□□□□□ -0.68
VPS25-201ENST00000253794 PKD1L1Q8TDX9 2849 aa10.83□□□□□ -0.68
VPS25-201ENST00000253794 TRAV30A0A087WSZ9 112 aa10.82□□□□□ -0.68
VPS25-201ENST00000253794 OR2T8A6NH00 312 aa10.82□□□□□ -0.68
VPS25-201ENST00000253794 PPP5D1E7EU14 171 aa10.82□□□□□ -0.68
VPS25-201ENST00000253794 GNG7O60262 68 aa10.82□□□□□ -0.68
VPS25-201ENST00000253794 CCNKO75909 580 aa10.82□□□□□ -0.68
VPS25-201ENST00000253794 IGHV3-48P01763 117 aa10.82□□□□□ -0.68
VPS25-201ENST00000253794 IGLC1P0CG04 106 aa10.82□□□□□ -0.68
VPS25-201ENST00000253794 BCAP31P51572 246 aa10.82□□□□□ -0.68
VPS25-201ENST00000253794 RND2P52198 227 aa10.82□□□□□ -0.68
VPS25-201ENST00000253794 KLF5Q13887 457 aaPredicted RBP10.82□□□□□ -0.68
VPS25-201ENST00000253794 Q56UQ5 140 aa10.82□□□□□ -0.68
VPS25-201ENST00000253794 Q5BKY6 102 aa10.82□□□□□ -0.68
VPS25-201ENST00000253794 OR8G2PQ6IF36 304 aa10.82□□□□□ -0.68
VPS25-201ENST00000253794 ACOT7LQ6ZUV0 252 aa10.82□□□□□ -0.68
VPS25-201ENST00000253794 STX12Q86Y82 276 aa10.82□□□□□ -0.68
VPS25-201ENST00000253794 THAP8Q8NA92 274 aa10.82□□□□□ -0.68
VPS25-201ENST00000253794 THAP6Q8TBB0 222 aa10.82□□□□□ -0.68
VPS25-201ENST00000253794 DCUN1D4Q92564 292 aa10.82□□□□□ -0.68
VPS25-201ENST00000253794 CHRDL1Q9BU40 450 aa10.82□□□□□ -0.68
VPS25-201ENST00000253794 PAIP2BQ9ULR5 123 aaKnown RBP10.82□□□□□ -0.68
VPS25-201ENST00000253794 WNK1Q9H4A3 2382 aa10.82□□□□□ -0.68
VPS25-201ENST00000253794 LGALS9O00182 355 aa10.81□□□□□ -0.68
VPS25-201ENST00000253794 NUPL2O15504 423 aaKnown RBP10.81□□□□□ -0.68
VPS25-201ENST00000253794 SCGB2A1O75556 95 aa10.81□□□□□ -0.68
VPS25-201ENST00000253794 IGKV1-17P01599 117 aa10.81□□□□□ -0.68
VPS25-201ENST00000253794 PF4P02776 101 aa10.81□□□□□ -0.68
VPS25-201ENST00000253794 S100A11P31949 105 aa10.81□□□□□ -0.68
VPS25-201ENST00000253794 EWSR1Q01844 656 aaKnown RBP eCLIP10.81□□□□□ -0.68
VPS25-201ENST00000253794 VWC2Q2TAL6 325 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms