RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 ZAR1Q86SH2 424 aa12.36□□□□□ -0.43
SPTLC2-201ENST00000216484 ZNF114Q8NC26 417 aa12.36□□□□□ -0.43
SPTLC2-201ENST00000216484 ZNF721Q8TF20 911 aa12.36□□□□□ -0.43
SPTLC2-201ENST00000216484 LILRA1O75019 489 aa12.36□□□□□ -0.43
SPTLC2-201ENST00000216484 GNG5P63218 68 aa12.36□□□□□ -0.43
SPTLC2-201ENST00000216484 KIAA1551Q9HCM1 1747 aa12.36□□□□□ -0.43
SPTLC2-201ENST00000216484 NHLRC3Q5JS37 347 aa12.36□□□□□ -0.43
SPTLC2-201ENST00000216484 UBR3Q6ZT12 1888 aa12.36□□□□□ -0.43
SPTLC2-201ENST00000216484 COX14Q96I36 57 aa12.35□□□□□ -0.43
SPTLC2-201ENST00000216484 ZNF831Q5JPB2 1677 aa12.35□□□□□ -0.43
SPTLC2-201ENST00000216484 H3BMM0 161 aa12.35□□□□□ -0.43
SPTLC2-201ENST00000216484 NDUFS5O43920 106 aa12.35□□□□□ -0.43
SPTLC2-201ENST00000216484 UBE2WQ96B02 151 aa12.35□□□□□ -0.43
SPTLC2-201ENST00000216484 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.35□□□□□ -0.43
SPTLC2-201ENST00000216484 ATP5G3P48201 142 aa12.35□□□□□ -0.43
SPTLC2-201ENST00000216484 C5orf47Q569G3 176 aa12.35□□□□□ -0.43
SPTLC2-201ENST00000216484 C9orf50Q5SZB4 431 aa12.35□□□□□ -0.43
SPTLC2-201ENST00000216484 TPTE2P1Q5T6R2 138 aa12.35□□□□□ -0.43
SPTLC2-201ENST00000216484 TMEM8BA6NDV4 472 aa12.35□□□□□ -0.43
SPTLC2-201ENST00000216484 LINC00587B1AMM8 73 aa12.35□□□□□ -0.43
SPTLC2-201ENST00000216484 HLA-DQB1P01920 261 aa12.35□□□□□ -0.43
SPTLC2-201ENST00000216484 FGF11Q92914 225 aa12.35□□□□□ -0.43
SPTLC2-201ENST00000216484 TRAV9-2A0A087WT02 112 aa12.35□□□□□ -0.43
SPTLC2-201ENST00000216484 NSUN5P1Q3KNT7 163 aa12.34□□□□□ -0.43
SPTLC2-201ENST00000216484 STRCP1A6NGW2 1772 aa12.34□□□□□ -0.43
SPTLC2-201ENST00000216484 MSGN1A6NI15 193 aa12.34□□□□□ -0.43
SPTLC2-201ENST00000216484 FSTP19883 344 aa12.34□□□□□ -0.43
SPTLC2-201ENST00000216484 TMEM187Q14656 261 aa12.34□□□□□ -0.43
SPTLC2-201ENST00000216484 NAA38Q9BRA0 125 aaKnown RBP12.34□□□□□ -0.43
SPTLC2-201ENST00000216484 SNHG12Q9BXW3 62 aa12.34□□□□□ -0.43
SPTLC2-201ENST00000216484 A0A0J9YW62 118 aa12.34□□□□□ -0.43
SPTLC2-201ENST00000216484 HSD52Q0P140 79 aa12.34□□□□□ -0.43
SPTLC2-201ENST00000216484 ATP5L2Q7Z4Y8 100 aa12.34□□□□□ -0.43
SPTLC2-201ENST00000216484 FAM168AQ92567 244 aa12.34□□□□□ -0.43
SPTLC2-201ENST00000216484 MALRD1Q5VYJ5 2156 aa12.34□□□□□ -0.43
SPTLC2-201ENST00000216484 CELA2AP08217 269 aa12.34□□□□□ -0.43
SPTLC2-201ENST00000216484 UCP3P55916 312 aa12.34□□□□□ -0.43
SPTLC2-201ENST00000216484 COL9A1P20849 921 aa12.34□□□□□ -0.43
SPTLC2-201ENST00000216484 ISXQ2M1V0 245 aa12.34□□□□□ -0.43
SPTLC2-201ENST00000216484 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.34□□□□□ -0.43
SPTLC2-201ENST00000216484 LHX2P50458 406 aa12.34□□□□□ -0.43
SPTLC2-201ENST00000216484 ZIC1Q15915 447 aa12.33□□□□□ -0.44
SPTLC2-201ENST00000216484 TMEM131Q92545 1883 aa12.33□□□□□ -0.44
SPTLC2-201ENST00000216484 TCRBV4S1A1TA0A5B7 111 aa12.33□□□□□ -0.44
SPTLC2-201ENST00000216484 ERVH48-1M5A8F1 160 aa12.33□□□□□ -0.44
SPTLC2-201ENST00000216484 RPL34P49207 117 aaKnown RBP12.33□□□□□ -0.44
SPTLC2-201ENST00000216484 ZNF124Q15973 351 aa12.33□□□□□ -0.44
SPTLC2-201ENST00000216484 C6orf226Q5I0X4 101 aa12.33□□□□□ -0.44
SPTLC2-201ENST00000216484 DTX1Q86Y01 620 aa12.33□□□□□ -0.44
SPTLC2-201ENST00000216484 MIR17HGQ75NE6 70 aa12.33□□□□□ -0.44
SPTLC2-201ENST00000216484 ZP4Q12836 540 aa12.33□□□□□ -0.44
SPTLC2-201ENST00000216484 PILRBQ9UKJ0 227 aa12.33□□□□□ -0.44
SPTLC2-201ENST00000216484 AGRNO00468 2067 aa12.33□□□□□ -0.44
SPTLC2-201ENST00000216484 NRN1LQ496H8 165 aa12.32□□□□□ -0.44
SPTLC2-201ENST00000216484 SCRT1Q9BWW7 348 aa12.32□□□□□ -0.44
SPTLC2-201ENST00000216484 IGHV1-45A0A0A0MS14 117 aa12.32□□□□□ -0.44
SPTLC2-201ENST00000216484 hADV29S1A0JD25 119 aa12.32□□□□□ -0.44
SPTLC2-201ENST00000216484 TCRAP04437 139 aa12.32□□□□□ -0.44
SPTLC2-201ENST00000216484 IFI27L1Q96BM0 104 aa12.32□□□□□ -0.44
SPTLC2-201ENST00000216484 ABHD17AQ96GS6 310 aa12.32□□□□□ -0.44
SPTLC2-201ENST00000216484 RAMP1O60894 148 aa12.32□□□□□ -0.44
SPTLC2-201ENST00000216484 ATP5IP56385 69 aaPredicted RBP12.32□□□□□ -0.44
SPTLC2-201ENST00000216484 SAXO1Q8IYX7 474 aa12.32□□□□□ -0.44
SPTLC2-201ENST00000216484 TET2Q6N021 2002 aaPredicted RBP12.32□□□□□ -0.44
SPTLC2-201ENST00000216484 TMEM30BQ3MIR4 351 aa12.32□□□□□ -0.44
SPTLC2-201ENST00000216484 C11orf44Q8N8P7 122 aa12.32□□□□□ -0.44
SPTLC2-201ENST00000216484 TMEM126AQ9H061 195 aa12.32□□□□□ -0.44
SPTLC2-201ENST00000216484 IFI27L2Q9H2X8 130 aa12.32□□□□□ -0.44
SPTLC2-201ENST00000216484 ZNF703Q9H7S9 590 aaPredicted RBP12.32□□□□□ -0.44
SPTLC2-201ENST00000216484 TRAV9-1A0A075B6T8 112 aa12.32□□□□□ -0.44
SPTLC2-201ENST00000216484 COLCA1Q6ZS62 124 aa12.32□□□□□ -0.44
SPTLC2-201ENST00000216484 LSM4Q9Y4Z0 139 aaKnown RBP12.32□□□□□ -0.44
SPTLC2-201ENST00000216484 PAPPA2Q9BXP8 1791 aa12.32□□□□□ -0.44
SPTLC2-201ENST00000216484 TCTEX1D4Q5JR98 221 aa12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 B9A039 149 aa12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 CRYBA2P53672 197 aa12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 CHCHD1Q96BP2 118 aaKnown RBP12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 DTX4Q9Y2E6 619 aa12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 ERCC8Q13216 396 aa12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 DEFB121Q5J5C9 76 aa12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 SLC50A1Q9BRV3 221 aa12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 FRMPD3Q5JV73 1810 aa12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 TAF1LQ8IZX4 1826 aa12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 FOXL2P58012 376 aa12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 TRAV14DV4A0A0A6YYC5 116 aa12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 MPTX1A8MV57 137 aa12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 F2Z2F3 143 aa12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 PRB4P10163 310 aaPredicted RBP12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 GATA2P23769 480 aaPredicted RBP12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 OTORQ9NRC9 128 aa12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 FAM90A10PA6NDY2 464 aa12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 FAM90A18PA6NE21 464 aa12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 FAM90A16PA6NEW6 464 aa12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 FAM90A20PA6NIJ5 464 aa12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 FAM90A8PA6NJQ4 464 aa12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 FAM90A7PA6NKC0 464 aa12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 FAM90A22PA8MWA6 464 aa12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 FAM90A12PA8MX19 464 aa12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 FAM90A5PA8MXJ8 464 aa12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 FAM90A23PA8MXZ1 464 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms