RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Tmed4Q8R1V4 227 aa12□□□□□ -0.49
Ercc1-201ENSMUST00000003645 GhitmQ91VC9 346 aa12□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Prr15Q9D1T5 122 aa12□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Dtd1Q9DD18 209 aaKnown RBP12□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Olfr943Q9EQ92 314 aa12□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Plp2Q9R1Q7 152 aa12□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Sumo3Q9Z172 110 aa12□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Sptbn1Q62261 2363 aaKnown RBP12□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Dock11A2AF47 2073 aa11.99□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Arid1bE9Q4N7 2244 aa11.99□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Gm5286E0CXI6 357 aa11.99□□□□□ -0.49
Ercc1-201ENSMUST00000003645 PrkacaP05132 351 aaKnown RBP11.99□□□□□ -0.49
Ercc1-201ENSMUST00000003645 CrpP14847 225 aa11.99□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Tpsb2P21845 276 aa11.99□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Rab7aP51150 207 aaKnown RBP11.99□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Fabp2P55050 132 aa11.99□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Rnd3P61588 244 aa11.99□□□□□ -0.49
Ercc1-201ENSMUST00000003645 S100a3P62818 101 aa11.99□□□□□ -0.49
Ercc1-201ENSMUST00000003645 KhkP97328 298 aa11.99□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Tmem88bQ3TYP4 173 aa11.99□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Fam169bQ8CHT6 337 aa11.99□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Cdpf1Q8R3A2 119 aa11.99□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Siglec12Q91Y57 467 aa11.99□□□□□ -0.49
Ercc1-201ENSMUST00000003645 CsprsQ99388 208 aa11.99□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Srd5a2Q99N99 254 aa11.99□□□□□ -0.49
Ercc1-201ENSMUST00000003645 GhsrQ99P50 364 aa11.99□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Mrpl42Q9CPV3 142 aa11.99□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Cldn10Q9Z0S6 231 aa11.99□□□□□ -0.49
Ercc1-201ENSMUST00000003645 FlncQ8VHX6 2726 aaKnown RBP11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Gm13547A2ARC0 163 aa11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Tmem139E9PX92 214 aa11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Cldn20G5E8X0 219 aa11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 G530012D18RikJ3QK25 139 aa11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Prrt1O35449 306 aa11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Mdh2P08249 338 aaKnown RBP11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 P18529 117 aa11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Fcer1gP20491 86 aa11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Hsf1P38532 525 aa11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Ube2mP61082 183 aaKnown RBP11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Supt4h1aP63271 117 aa11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 SlpiP97430 131 aa11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Sap30lQ5SQF8 182 aa11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Slc35e3Q6PGC7 313 aa11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Ube2d2bQ6ZWY6 147 aa11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Olfr1219Q7TR04 311 aa11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Fbxw26Q8BI58 466 aa11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Znf146Q8BQN6 292 aa11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Gpr4Q8BUD0 365 aa11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 OtosQ8R448 89 aa11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Olfr1298Q8VGE6 312 aa11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Pbp2Q8VIN1 187 aa11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Polr3kQ9CQZ7 108 aa11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Atp5sQ9CRA7 200 aa11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Mtfp1Q9CRB8 166 aa11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Gng12Q9DAS9 72 aa11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Sh2d2aQ9QXK9 374 aa11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 OtogO55225 2910 aa11.98□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Tmem156A0A1D5RLR8 321 aa11.97□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Vmn1r180B9EK86 305 aa11.97□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Gm21721J3QMK7 227 aa11.97□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Gm21746J3QMM6 180 aa11.97□□□□□ -0.49
Ercc1-201ENSMUST00000003645 S100a6P14069 89 aa11.97□□□□□ -0.49
Ercc1-201ENSMUST00000003645 B4galt1P15535 399 aa11.97□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Il11P47873 199 aa11.97□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Igfbp3P47878 292 aa11.97□□□□□ -0.49
Ercc1-201ENSMUST00000003645 GferP56213 198 aa11.97□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Ufd1P70362 307 aa11.97□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Fam220aQ3ZN08 260 aa11.97□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Taar5Q5QD14 337 aa11.97□□□□□ -0.49
Ercc1-201ENSMUST00000003645 CapslQ6P8Y1 208 aa11.97□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Ap1s3Q7TN05 154 aa11.97□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Prss34Q80UR4 318 aa11.97□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Gipc3Q8R5M0 297 aa11.97□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Olfr95Q8VFE2 312 aa11.97□□□□□ -0.49
Ercc1-201ENSMUST00000003645 H2afb1Q9CQ70 111 aa11.97□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Q9CR55 154 aa11.97□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Zcchc12Q9CZA5 402 aa11.97□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Kcnk5Q9JK62 502 aa11.97□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Tmem182B2RVY9 229 aa11.96□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Gm17455G3UW87 128 aa11.96□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Gosr2O35166 212 aa11.96□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Kcns2O35174 477 aa11.96□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Rpl27aP14115 148 aaKnown RBP11.96□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Ceacam14Q78Y72 263 aa11.96□□□□□ -0.49
Ercc1-201ENSMUST00000003645 BC049730Q810N3 246 aa11.96□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Q8BTC1 67 aa11.96□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Q8VCE4 163 aa11.96□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Olfr790Q8VGJ3 322 aa11.96□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Rwdd3Q8VIL2 267 aa11.96□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Ap1s2Q9DB50 160 aa11.96□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Klk4Q9Z0M1 255 aa11.96□□□□□ -0.49
Ercc1-201ENSMUST00000003645 Celsr2Q9R0M0 2920 aa11.96□□□□□ -0.5
Ercc1-201ENSMUST00000003645 Ighv1-13A0A075B5I0 98 aa11.95□□□□□ -0.5
Ercc1-201ENSMUST00000003645 Zfp109A0A0U1RPC5 652 aa11.95□□□□□ -0.5
Ercc1-201ENSMUST00000003645 Scgb1b30A2BH64 92 aa11.95□□□□□ -0.5
Ercc1-201ENSMUST00000003645 Olfr427E9Q7E7 315 aa11.95□□□□□ -0.5
Ercc1-201ENSMUST00000003645 Gm3727J3QM54 205 aa11.95□□□□□ -0.5
Ercc1-201ENSMUST00000003645 F2rl2O08675 369 aa11.95□□□□□ -0.5
Ercc1-201ENSMUST00000003645 LtaP09225 202 aa11.95□□□□□ -0.5
Ercc1-201ENSMUST00000003645 Slc6a9P28571 692 aa11.95□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 43.4 ms