RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 ANAPC10Q9UM13 185 aa16.51■□□□□ 0.23
CACNA1A-257ENST00000638009 LINC00158P58513 81 aa16.51■□□□□ 0.23
CACNA1A-257ENST00000638009 OSR1Q8TAX0 266 aaPredicted RBP16.51■□□□□ 0.23
CACNA1A-257ENST00000638009 TRGV11A0A075B6L2 103 aa16.51■□□□□ 0.23
CACNA1A-257ENST00000638009 IGHV1OR21-1A0A087WYE8 117 aa16.51■□□□□ 0.23
CACNA1A-257ENST00000638009 C1QL1O75973 258 aa16.51■□□□□ 0.23
CACNA1A-257ENST00000638009 AGFG2O95081 481 aa16.51■□□□□ 0.23
CACNA1A-257ENST00000638009 TRGV3P03979 118 aa16.51■□□□□ 0.23
CACNA1A-257ENST00000638009 COX5BP10606 129 aa16.51■□□□□ 0.23
CACNA1A-257ENST00000638009 ZP4Q12836 540 aa16.51■□□□□ 0.23
CACNA1A-257ENST00000638009 CARHSP1Q9Y2V2 147 aaKnown RBP16.51■□□□□ 0.23
CACNA1A-257ENST00000638009 HAX1O00165 279 aa16.5■□□□□ 0.23
CACNA1A-257ENST00000638009 FUT5Q11128 374 aa16.5■□□□□ 0.23
CACNA1A-257ENST00000638009 NRN1Q9NPD7 142 aa16.5■□□□□ 0.23
CACNA1A-257ENST00000638009 STHQ8IWL8 128 aa16.5■□□□□ 0.23
CACNA1A-257ENST00000638009 CT55Q8WUE5 264 aa16.5■□□□□ 0.23
CACNA1A-257ENST00000638009 MRPS18AQ9NVS2 196 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-257ENST00000638009 FOXA3P55318 350 aaPredicted RBP16.5■□□□□ 0.23
CACNA1A-257ENST00000638009 PPIAL4CA0A0B4J2A2 164 aa16.5■□□□□ 0.23
CACNA1A-257ENST00000638009 PPIAL4GP0DN37 164 aa16.5■□□□□ 0.23
CACNA1A-257ENST00000638009 ZNF385AQ96PM9 386 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-257ENST00000638009 PAX4O43316 350 aa16.49■□□□□ 0.23
CACNA1A-257ENST00000638009 COL22A1Q8NFW1 1626 aaPredicted RBP16.49■□□□□ 0.23
CACNA1A-257ENST00000638009 TRBV20-1A0A075B6N2 111 aa16.49■□□□□ 0.23
CACNA1A-257ENST00000638009 PLA2G10O15496 165 aa16.49■□□□□ 0.23
CACNA1A-257ENST00000638009 DUSP14O95147 198 aaKnown RBP16.49■□□□□ 0.23
CACNA1A-257ENST00000638009 ZP1P60852 638 aa16.49■□□□□ 0.23
CACNA1A-257ENST00000638009 PRADC1Q9BSG0 188 aa16.49■□□□□ 0.23
CACNA1A-257ENST00000638009 J3QW42 95 aa16.49■□□□□ 0.23
CACNA1A-257ENST00000638009 JMJD8Q96S16 334 aa16.49■□□□□ 0.23
CACNA1A-257ENST00000638009 TRACP01848 142 aa16.49■□□□□ 0.23
CACNA1A-257ENST00000638009 SPINK8P0C7L1 97 aa16.49■□□□□ 0.23
CACNA1A-257ENST00000638009 ZNF71Q9NQZ8 489 aaPredicted RBP16.49■□□□□ 0.23
CACNA1A-257ENST00000638009 CD7P09564 240 aa16.49■□□□□ 0.23
CACNA1A-257ENST00000638009 TEX45Q8NA69 505 aa16.49■□□□□ 0.23
CACNA1A-257ENST00000638009 PDLIM4P50479 330 aa16.49■□□□□ 0.23
CACNA1A-257ENST00000638009 CCL8P80075 99 aa16.49■□□□□ 0.23
CACNA1A-257ENST00000638009 PRSS23O95084 383 aa16.48■□□□□ 0.23
CACNA1A-257ENST00000638009 RCC1LQ96I51 464 aaKnown RBP16.48■□□□□ 0.23
CACNA1A-257ENST00000638009 PATE4P0C8F1 98 aa16.48■□□□□ 0.23
CACNA1A-257ENST00000638009 MAJINQ3KP22 176 aa16.48■□□□□ 0.23
CACNA1A-257ENST00000638009 CCL13Q99616 98 aa16.48■□□□□ 0.23
CACNA1A-257ENST00000638009 SCTP09683 121 aa16.48■□□□□ 0.23
CACNA1A-257ENST00000638009 A0A1W2PPC1 479 aa16.48■□□□□ 0.23
CACNA1A-257ENST00000638009 FOXD3Q9UJU5 478 aaPredicted RBP16.48■□□□□ 0.23
CACNA1A-257ENST00000638009 RNF115Q9Y4L5 304 aa16.48■□□□□ 0.23
CACNA1A-257ENST00000638009 DEFB123Q8N688 67 aa16.47■□□□□ 0.23
CACNA1A-257ENST00000638009 MRPS18BQ9Y676 258 aaKnown RBP16.47■□□□□ 0.23
CACNA1A-257ENST00000638009 VEGFBP49765 207 aa16.47■□□□□ 0.23
CACNA1A-257ENST00000638009 CD300CQ08708 224 aa16.47■□□□□ 0.23
CACNA1A-257ENST00000638009 ABHD12Q8N2K0 398 aa16.47■□□□□ 0.23
CACNA1A-257ENST00000638009 CBLN3Q6UW01 205 aa16.47■□□□□ 0.23
CACNA1A-257ENST00000638009 OTORQ9NRC9 128 aa16.47■□□□□ 0.23
CACNA1A-257ENST00000638009 MARF1Q9Y4F3 1742 aaKnown RBP16.47■□□□□ 0.23
CACNA1A-257ENST00000638009 C1orf210Q8IVY1 113 aa16.47■□□□□ 0.23
CACNA1A-257ENST00000638009 ST6GALNAC3Q8NDV1 305 aa16.47■□□□□ 0.23
CACNA1A-257ENST00000638009 NPDC1Q9NQX5 325 aaPredicted RBP16.47■□□□□ 0.23
CACNA1A-257ENST00000638009 NGFRP08138 427 aa16.47■□□□□ 0.23
CACNA1A-257ENST00000638009 SPRED2Q7Z698 418 aa16.46■□□□□ 0.23
CACNA1A-257ENST00000638009 UBL5Q9BZL1 73 aa16.46■□□□□ 0.23
CACNA1A-257ENST00000638009 C5orf66Q9H5L9 145 aa16.46■□□□□ 0.23
CACNA1A-257ENST00000638009 HIVEP3Q5T1R4 2406 aa16.46■□□□□ 0.23
CACNA1A-257ENST00000638009 ZNF79Q15937 498 aa16.46■□□□□ 0.23
CACNA1A-257ENST00000638009 IGKV3-20P01619 116 aa16.46■□□□□ 0.23
CACNA1A-257ENST00000638009 POU2AF1Q16633 256 aa16.46■□□□□ 0.23
CACNA1A-257ENST00000638009 SCARF2Q96GP6 870 aaPredicted RBP16.46■□□□□ 0.23
CACNA1A-257ENST00000638009 SSBP3Q9BWW4 388 aaPredicted RBP16.46■□□□□ 0.23
CACNA1A-257ENST00000638009 REG1AP05451 166 aa16.46■□□□□ 0.23
CACNA1A-257ENST00000638009 EGR2P11161 476 aaPredicted RBP16.46■□□□□ 0.23
CACNA1A-257ENST00000638009 RTN4RL2Q86UN3 420 aa16.46■□□□□ 0.23
CACNA1A-257ENST00000638009 VSIG10L2P0DP72 767 aa16.45■□□□□ 0.22
CACNA1A-257ENST00000638009 SNAI2O43623 268 aa16.45■□□□□ 0.22
CACNA1A-257ENST00000638009 C1QTNF9P0C862 333 aa16.45■□□□□ 0.22
CACNA1A-257ENST00000638009 OR5P3Q8WZ94 311 aa16.45■□□□□ 0.22
CACNA1A-257ENST00000638009 TMEM196Q5HYL7 178 aa16.45■□□□□ 0.22
CACNA1A-257ENST00000638009 FAM214BQ7L5A3 538 aa16.45■□□□□ 0.22
CACNA1A-257ENST00000638009 ZNF784Q8NCA9 323 aaPredicted RBP16.45■□□□□ 0.22
CACNA1A-257ENST00000638009 C1orf162Q8NEQ5 155 aaPredicted RBP16.45■□□□□ 0.22
CACNA1A-257ENST00000638009 Q9H3A6 140 aa16.45■□□□□ 0.22
CACNA1A-257ENST00000638009 LOC102723996A0A087X1L8 192 aa16.45■□□□□ 0.22
CACNA1A-257ENST00000638009 ATP5J2P56134 94 aa16.45■□□□□ 0.22
CACNA1A-257ENST00000638009 EFNB1P98172 346 aa16.45■□□□□ 0.22
CACNA1A-257ENST00000638009 TRGV4A0A0C4DH28 118 aa16.45■□□□□ 0.22
CACNA1A-257ENST00000638009 B9A039 149 aa16.45■□□□□ 0.22
CACNA1A-257ENST00000638009 MLNRO43193 412 aa16.45■□□□□ 0.22
CACNA1A-257ENST00000638009 FAM19A2Q8N3H0 131 aa16.45■□□□□ 0.22
CACNA1A-257ENST00000638009 INS-IGF2F8WCM5 200 aa16.44■□□□□ 0.22
CACNA1A-257ENST00000638009 INSP01308 110 aa16.44■□□□□ 0.22
CACNA1A-257ENST00000638009 SRD5A1P18405 259 aa16.44■□□□□ 0.22
CACNA1A-257ENST00000638009 CTGFP29279 349 aa16.44■□□□□ 0.22
CACNA1A-257ENST00000638009 A0A0G2JMM0 328 aa16.44■□□□□ 0.22
CACNA1A-257ENST00000638009 A0A1W2PPB8 328 aa16.44■□□□□ 0.22
CACNA1A-257ENST00000638009 KIR3DP1A8MWS1 328 aa16.44■□□□□ 0.22
CACNA1A-257ENST00000638009 IRF3Q14653 427 aa16.44■□□□□ 0.22
CACNA1A-257ENST00000638009 NOVP48745 357 aa16.44■□□□□ 0.22
CACNA1A-257ENST00000638009 CD160O95971 181 aa16.44■□□□□ 0.22
CACNA1A-257ENST00000638009 UBE2WQ96B02 151 aa16.44■□□□□ 0.22
CACNA1A-257ENST00000638009 A0A087WX48 190 aa16.44■□□□□ 0.22
CACNA1A-257ENST00000638009 TMEM170AQ8WVE7 144 aa16.43■□□□□ 0.22
CACNA1A-257ENST00000638009 DCAF12L2Q5VW00 463 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms