RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 STAG3L2P0CL84 134 aa15.24■□□□□ 0.03
PSPC1-206ENST00000619300 STAG3L3P0CL85 134 aa15.24■□□□□ 0.03
PSPC1-206ENST00000619300 OR10J1P30954 320 aa15.24■□□□□ 0.03
PSPC1-206ENST00000619300 RHOBP62745 196 aa15.24■□□□□ 0.03
PSPC1-206ENST00000619300 TVP23CQ96ET8 276 aa15.24■□□□□ 0.03
PSPC1-206ENST00000619300 CCL19Q99731 98 aa15.24■□□□□ 0.03
PSPC1-206ENST00000619300 FNDC4Q9H6D8 234 aaPredicted RBP15.24■□□□□ 0.03
PSPC1-206ENST00000619300 DOPEY1Q5JWR5 2465 aa15.23■□□□□ 0.03
PSPC1-206ENST00000619300 FCN1O00602 326 aa15.23■□□□□ 0.03
PSPC1-206ENST00000619300 PAGE4O60829 102 aa15.23■□□□□ 0.03
PSPC1-206ENST00000619300 MOSP00540 346 aa15.23■□□□□ 0.03
PSPC1-206ENST00000619300 PLGLAQ15195 96 aa15.23■□□□□ 0.03
PSPC1-206ENST00000619300 SSX2Q16385 188 aa15.23■□□□□ 0.03
PSPC1-206ENST00000619300 MINOS1Q5TGZ0 78 aa15.23■□□□□ 0.03
PSPC1-206ENST00000619300 PVRIGQ6DKI7 326 aa15.23■□□□□ 0.03
PSPC1-206ENST00000619300 CCDC144NLQ6NUI1 221 aa15.23■□□□□ 0.03
PSPC1-206ENST00000619300 ZNF114Q8NC26 417 aa15.23■□□□□ 0.03
PSPC1-206ENST00000619300 SEPSECSQ9HD40 501 aaKnown RBP15.23■□□□□ 0.03
PSPC1-206ENST00000619300 MINOS1-NBL1R4GNA1 71 aa15.23■□□□□ 0.03
PSPC1-206ENST00000619300 OOSP1A8MZH6 123 aa15.22■□□□□ 0.03
PSPC1-206ENST00000619300 CXorf1O96002 111 aa15.22■□□□□ 0.03
PSPC1-206ENST00000619300 AREGP15514 252 aa15.22■□□□□ 0.03
PSPC1-206ENST00000619300 ACY3Q96HD9 319 aa15.22■□□□□ 0.03
PSPC1-206ENST00000619300 TUBA4BQ9H853 241 aa15.22■□□□□ 0.03
PSPC1-206ENST00000619300 FLNCQ14315 2725 aa15.22■□□□□ 0.03
PSPC1-206ENST00000619300 TMEM250H0YL14 139 aa15.22■□□□□ 0.03
PSPC1-206ENST00000619300 TOX4O94842 621 aa15.22■□□□□ 0.03
PSPC1-206ENST00000619300 ARL14EPLP0DKL9 152 aa15.22■□□□□ 0.03
PSPC1-206ENST00000619300 PAX6P26367 422 aa15.22■□□□□ 0.03
PSPC1-206ENST00000619300 LGALS4P56470 323 aa15.22■□□□□ 0.03
PSPC1-206ENST00000619300 MMDQ15546 238 aa15.22■□□□□ 0.03
PSPC1-206ENST00000619300 NPBQ8NG41 125 aa15.22■□□□□ 0.03
PSPC1-206ENST00000619300 AKAP6Q13023 2319 aa15.21■□□□□ 0.03
PSPC1-206ENST00000619300 COLCA2A8K830 154 aa15.21■□□□□ 0.03
PSPC1-206ENST00000619300 TEX22C9J3V5 150 aa15.21■□□□□ 0.03
PSPC1-206ENST00000619300 NBR2O15453 112 aa15.21■□□□□ 0.03
PSPC1-206ENST00000619300 FOXH1O75593 365 aa15.21■□□□□ 0.03
PSPC1-206ENST00000619300 SSBP2P81877 361 aaPredicted RBP15.21■□□□□ 0.03
PSPC1-206ENST00000619300 OR4F5Q8NH21 305 aa15.21■□□□□ 0.03
PSPC1-206ENST00000619300 EAF1Q96JC9 268 aaPredicted RBP15.21■□□□□ 0.03
PSPC1-206ENST00000619300 OR4F4Q96R69 305 aa15.21■□□□□ 0.03
PSPC1-206ENST00000619300 SPNS3Q6ZMD2 512 aa15.21■□□□□ 0.02
PSPC1-206ENST00000619300 ZNF843Q8N446 348 aa15.21■□□□□ 0.02
PSPC1-206ENST00000619300 OR1P1Q8NH06 330 aa15.21■□□□□ 0.02
PSPC1-206ENST00000619300 NANPQ8TBE9 248 aa15.21■□□□□ 0.02
PSPC1-206ENST00000619300 SRSF12Q8WXF0 261 aaKnown RBP15.21■□□□□ 0.02
PSPC1-206ENST00000619300 NPIPB3Q92617 1050 aa15.21■□□□□ 0.02
PSPC1-206ENST00000619300 APELAP0DMC3 54 aa15.2■□□□□ 0.02
PSPC1-206ENST00000619300 GATA2P23769 480 aaPredicted RBP15.2■□□□□ 0.02
PSPC1-206ENST00000619300 CD24P25063 80 aa15.2■□□□□ 0.02
PSPC1-206ENST00000619300 MFAP2P55001 183 aa15.2■□□□□ 0.02
PSPC1-206ENST00000619300 SPATA31B1PQ5VZV4 182 aa15.2■□□□□ 0.02
PSPC1-206ENST00000619300 ETFRF1Q6IPR1 90 aa15.2■□□□□ 0.02
PSPC1-206ENST00000619300 DYNAPQ8N1N2 210 aa15.2■□□□□ 0.02
PSPC1-206ENST00000619300 C15orf54Q8N8G6 183 aa15.2■□□□□ 0.02
PSPC1-206ENST00000619300 OR2T10Q8NGZ9 312 aa15.2■□□□□ 0.02
PSPC1-206ENST00000619300 C19orf24Q9BVV8 132 aa15.2■□□□□ 0.02
PSPC1-206ENST00000619300 PLXNB1O43157 2135 aa15.2■□□□□ 0.02
PSPC1-206ENST00000619300 ZNF727A8MUV8 499 aa15.19■□□□□ 0.02
PSPC1-206ENST00000619300 NDUFA3O95167 84 aa15.19■□□□□ 0.02
PSPC1-206ENST00000619300 UBE2E1P51965 193 aa15.19■□□□□ 0.02
PSPC1-206ENST00000619300 HES1Q14469 280 aa15.19■□□□□ 0.02
PSPC1-206ENST00000619300 FAM78BQ5VT40 261 aa15.19■□□□□ 0.02
PSPC1-206ENST00000619300 CYP2G1PQ6ZSU1 146 aa15.19■□□□□ 0.02
PSPC1-206ENST00000619300 LINC00518Q8N0U6 118 aa15.19■□□□□ 0.02
PSPC1-206ENST00000619300 TBX15Q96SF7 602 aa15.19■□□□□ 0.02
PSPC1-206ENST00000619300 USP9XQ93008 2570 aaPredicted RBP15.19■□□□□ 0.02
PSPC1-206ENST00000619300 COL12A1Q99715 3063 aa15.19■□□□□ 0.02
PSPC1-206ENST00000619300 C11orf94C9JXX5 98 aa15.19■□□□□ 0.02
PSPC1-206ENST00000619300 CNIH1O95406 144 aa15.19■□□□□ 0.02
PSPC1-206ENST00000619300 IGHV3-48P01763 117 aa15.19■□□□□ 0.02
PSPC1-206ENST00000619300 CRYGCP07315 174 aa15.19■□□□□ 0.02
PSPC1-206ENST00000619300 PNRC1Q12796 327 aaPredicted RBP15.19■□□□□ 0.02
PSPC1-206ENST00000619300 THAP8Q8NA92 274 aa15.19■□□□□ 0.02
PSPC1-206ENST00000619300 FAM168AQ92567 244 aa15.19■□□□□ 0.02
PSPC1-206ENST00000619300 MISP3Q96FF7 219 aa15.19■□□□□ 0.02
PSPC1-206ENST00000619300 SRSF8Q9BRL6 282 aaKnown RBP15.19■□□□□ 0.02
PSPC1-206ENST00000619300 MT-CO2P00403 227 aa15.18■□□□□ 0.02
PSPC1-206ENST00000619300 PIMREGQ9BSJ6 248 aa15.18■□□□□ 0.02
PSPC1-206ENST00000619300 SDF2L1Q9HCN8 221 aa15.18■□□□□ 0.02
PSPC1-206ENST00000619300 MRPL36Q9P0J6 103 aaKnown RBP15.18■□□□□ 0.02
PSPC1-206ENST00000619300 FUT9Q9Y231 359 aa15.18■□□□□ 0.02
PSPC1-206ENST00000619300 POLR3KQ9Y2Y1 108 aaPredicted RBP15.18■□□□□ 0.02
PSPC1-206ENST00000619300 TBL2Q9Y4P3 447 aaKnown RBP15.18■□□□□ 0.02
PSPC1-206ENST00000619300 F11RQ9Y624 299 aaKnown RBP15.18■□□□□ 0.02
PSPC1-206ENST00000619300 A0A087WWC5 75 aa15.17■□□□□ 0.02
PSPC1-206ENST00000619300 B4DEV8 164 aa15.17■□□□□ 0.02
PSPC1-206ENST00000619300 GCHFRP30047 84 aa15.17■□□□□ 0.02
PSPC1-206ENST00000619300 UBE2G2P60604 165 aa15.17■□□□□ 0.02
PSPC1-206ENST00000619300 CST9LP1Q5W188 147 aa15.17■□□□□ 0.02
PSPC1-206ENST00000619300 MIR17HGQ75NE6 70 aa15.17■□□□□ 0.02
PSPC1-206ENST00000619300 SMIM7Q9BQ49 75 aa15.17■□□□□ 0.02
PSPC1-206ENST00000619300 ZFYVE26Q68DK2 2539 aa15.17■□□□□ 0.02
PSPC1-206ENST00000619300 IGKV1D-37A0A075B6S9 117 aa15.17■□□□□ 0.02
PSPC1-206ENST00000619300 CORTO00230 105 aa15.17■□□□□ 0.02
PSPC1-206ENST00000619300 EBI3Q14213 229 aa15.17■□□□□ 0.02
PSPC1-206ENST00000619300 C19orf35Q6ZS72 473 aa15.17■□□□□ 0.02
PSPC1-206ENST00000619300 C10orf105Q8TEF2 133 aa15.17■□□□□ 0.02
PSPC1-206ENST00000619300 ISOC2Q96AB3 205 aa15.17■□□□□ 0.02
PSPC1-206ENST00000619300 MALSU1Q96EH3 234 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms